RNA–Protein interactions for RNA: ENST00000593025.1

RANBP3-230, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 551 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-230ENST00000593025 SCN10AQ9Y5Y9 1956 aa12.94□□□□□ -0.34
RANBP3-230ENST00000593025 RAD21O60216 631 aa12.93□□□□□ -0.34
RANBP3-230ENST00000593025 MBD4O95243 580 aa12.93□□□□□ -0.34
RANBP3-230ENST00000593025 IL9P15248 144 aa12.93□□□□□ -0.34
RANBP3-230ENST00000593025 SLC4A3P48751 1232 aa12.93□□□□□ -0.34
RANBP3-230ENST00000593025 TAPT1Q6NXT6 567 aa12.93□□□□□ -0.34
RANBP3-230ENST00000593025 TMCO2Q7Z6W1 182 aaPredicted RBP12.93□□□□□ -0.34
RANBP3-230ENST00000593025 GJD3Q8N144 294 aa12.93□□□□□ -0.34
RANBP3-230ENST00000593025 ANKRD35Q8N283 1001 aa12.93□□□□□ -0.34
RANBP3-230ENST00000593025 TMEM57Q8N5G2 664 aa12.93□□□□□ -0.34
RANBP3-230ENST00000593025 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.93□□□□□ -0.34
RANBP3-230ENST00000593025 GDPD5Q8WTR4 605 aa12.93□□□□□ -0.34
RANBP3-230ENST00000593025 SIP14410 1827 aa12.92□□□□□ -0.34
RANBP3-230ENST00000593025 USP17L12C9JPN9 530 aa12.92□□□□□ -0.34
RANBP3-230ENST00000593025 USP17L21D6R901 530 aa12.92□□□□□ -0.34
RANBP3-230ENST00000593025 F5H6K3 240 aa12.92□□□□□ -0.34
RANBP3-230ENST00000593025 DYNC1LI2O43237 492 aaPredicted RBP12.92□□□□□ -0.34
RANBP3-230ENST00000593025 KLRC3Q07444 240 aa12.92□□□□□ -0.34
RANBP3-230ENST00000593025 AACSQ86V21 672 aa12.92□□□□□ -0.34
RANBP3-230ENST00000593025 PRPF38AQ8NAV1 312 aaKnown RBP12.92□□□□□ -0.34
RANBP3-230ENST00000593025 PHOSPHO2Q8TCD6 241 aa12.92□□□□□ -0.34
RANBP3-230ENST00000593025 SEZ6LQ9BYH1 1024 aa12.92□□□□□ -0.34
RANBP3-230ENST00000593025 UBE2ZQ9H832 354 aaPredicted RBP12.92□□□□□ -0.34
RANBP3-230ENST00000593025 A1CFQ9NQ94 594 aaKnown RBP12.92□□□□□ -0.34
RANBP3-230ENST00000593025 ATP8A2Q9NTI2 1148 aa12.92□□□□□ -0.34
RANBP3-230ENST00000593025 MYH7P12883 1935 aa12.92□□□□□ -0.34
RANBP3-230ENST00000593025 TNKSO95271 1327 aa12.91□□□□□ -0.34
RANBP3-230ENST00000593025 GOLIM4O00461 696 aa12.91□□□□□ -0.34
RANBP3-230ENST00000593025 GPNMBQ14956 572 aa12.91□□□□□ -0.34
RANBP3-230ENST00000593025 LEXMQ3ZCV2 418 aa12.91□□□□□ -0.34
RANBP3-230ENST00000593025 CTR9Q6PD62 1173 aa12.91□□□□□ -0.34
RANBP3-230ENST00000593025 FBXO16Q8IX29 292 aaPredicted RBP12.91□□□□□ -0.34
RANBP3-230ENST00000593025 CHST13Q8NET6 341 aa12.91□□□□□ -0.34
RANBP3-230ENST00000593025 PPP1R13LQ8WUF5 828 aa12.91□□□□□ -0.34
RANBP3-230ENST00000593025 PHOX2BQ99453 314 aa12.91□□□□□ -0.34
RANBP3-230ENST00000593025 ZNF536O15090 1300 aa12.9□□□□□ -0.34
RANBP3-230ENST00000593025 IGKV6D-41A0A0C4DH26 115 aa12.9□□□□□ -0.34
RANBP3-230ENST00000593025 POTEB3A0JP26 581 aa12.9□□□□□ -0.34
RANBP3-230ENST00000593025 RASA1P20936 1047 aa12.9□□□□□ -0.34
RANBP3-230ENST00000593025 TTF1Q15361 905 aaPredicted RBP12.9□□□□□ -0.34
RANBP3-230ENST00000593025 TCTN1Q2MV58 587 aa12.9□□□□□ -0.34
RANBP3-230ENST00000593025 POTEBQ6S5H4 581 aa12.9□□□□□ -0.34
RANBP3-230ENST00000593025 NOL8Q76FK4 1167 aaKnown RBP12.9□□□□□ -0.34
RANBP3-230ENST00000593025 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.9□□□□□ -0.34
RANBP3-230ENST00000593025 KIFC2Q96AC6 838 aa12.9□□□□□ -0.34
RANBP3-230ENST00000593025 HOMER2Q9NSB8 354 aa12.9□□□□□ -0.34
RANBP3-230ENST00000593025 LMCD1Q9NZU5 365 aa12.9□□□□□ -0.34
RANBP3-230ENST00000593025 NYAP2Q9P242 653 aa12.9□□□□□ -0.34
RANBP3-230ENST00000593025 FBXO40Q9UH90 709 aa12.9□□□□□ -0.34
RANBP3-230ENST00000593025 EXOC6BQ9Y2D4 811 aa12.9□□□□□ -0.34
RANBP3-230ENST00000593025 CACNA1AO00555 2505 aa12.89□□□□□ -0.35
RANBP3-230ENST00000593025 ZBED4O75132 1171 aa12.89□□□□□ -0.35
RANBP3-230ENST00000593025 IQCF3P0C7M6 154 aa12.89□□□□□ -0.35
RANBP3-230ENST00000593025 ADD2P35612 726 aa12.89□□□□□ -0.35
RANBP3-230ENST00000593025 OAZ1P54368 228 aa12.89□□□□□ -0.35
RANBP3-230ENST00000593025 PURAQ00577 322 aaKnown RBP12.89□□□□□ -0.35
RANBP3-230ENST00000593025 PURBQ96QR8 312 aaKnown RBP12.89□□□□□ -0.35
RANBP3-230ENST00000593025 UIMC1Q96RL1 719 aa12.89□□□□□ -0.35
RANBP3-230ENST00000593025 CTAGE1Q96RT6 745 aa12.89□□□□□ -0.35
RANBP3-230ENST00000593025 AP5M1Q9H0R1 490 aa12.89□□□□□ -0.35
RANBP3-230ENST00000593025 SUGCTQ9HAC7 445 aa12.89□□□□□ -0.35
RANBP3-230ENST00000593025 Q9Y3F1 56 aa12.89□□□□□ -0.35
RANBP3-230ENST00000593025 MYO15AQ9UKN7 3530 aa12.88□□□□□ -0.35
RANBP3-230ENST00000593025 GRXCR2A6NFK2 248 aa12.88□□□□□ -0.35
RANBP3-230ENST00000593025 ACTN1P12814 892 aa12.88□□□□□ -0.35
RANBP3-230ENST00000593025 KCNA5P22460 613 aa12.88□□□□□ -0.35
RANBP3-230ENST00000593025 RFC2P35250 354 aa12.88□□□□□ -0.35
RANBP3-230ENST00000593025 WDR5P61964 334 aaKnown RBP12.88□□□□□ -0.35
RANBP3-230ENST00000593025 DEFB103AP81534 67 aa12.88□□□□□ -0.35
RANBP3-230ENST00000593025 EEPD1Q7L9B9 569 aa12.88□□□□□ -0.35
RANBP3-230ENST00000593025 MORC4Q8TE76 937 aa12.88□□□□□ -0.35
RANBP3-230ENST00000593025 FRAT1Q92837 279 aaPredicted RBP12.88□□□□□ -0.35
RANBP3-230ENST00000593025 DNAJC2Q99543 621 aaKnown RBP12.88□□□□□ -0.35
RANBP3-230ENST00000593025 ACAD9Q9H845 621 aa12.88□□□□□ -0.35
RANBP3-230ENST00000593025 IL1RAPL2Q9NP60 686 aa12.88□□□□□ -0.35
RANBP3-230ENST00000593025 SPTBN4Q9H254 2564 aa12.88□□□□□ -0.35
RANBP3-230ENST00000593025 ATG2AQ2TAZ0 1938 aa12.88□□□□□ -0.35
RANBP3-230ENST00000593025 TRIP12Q14669 1992 aaPredicted RBP12.87□□□□□ -0.35
RANBP3-230ENST00000593025 ASB14A6NK59 587 aa12.87□□□□□ -0.35
RANBP3-230ENST00000593025 PITPNM1O00562 1244 aa12.87□□□□□ -0.35
RANBP3-230ENST00000593025 ALADP13716 330 aa12.87□□□□□ -0.35
RANBP3-230ENST00000593025 IQSEC1Q6DN90 963 aa12.87□□□□□ -0.35
RANBP3-230ENST00000593025 PTCRAQ6ISU1 281 aaPredicted RBP12.87□□□□□ -0.35
RANBP3-230ENST00000593025 CEP85Q6P2H3 762 aa12.87□□□□□ -0.35
RANBP3-230ENST00000593025 HFE2Q6ZVN8 426 aa12.87□□□□□ -0.35
RANBP3-230ENST00000593025 NEK9Q8TD19 979 aa12.87□□□□□ -0.35
RANBP3-230ENST00000593025 KCNH6Q9H252 994 aa12.87□□□□□ -0.35
RANBP3-230ENST00000593025 RNF146Q9NTX7 359 aa12.87□□□□□ -0.35
RANBP3-230ENST00000593025 MTUS1Q9ULD2 1270 aa12.87□□□□□ -0.35
RANBP3-230ENST00000593025 TECTAO75443 2155 aa12.86□□□□□ -0.35
RANBP3-230ENST00000593025 IPO8O15397 1037 aaKnown RBP12.86□□□□□ -0.35
RANBP3-230ENST00000593025 DCXO43602 365 aa12.86□□□□□ -0.35
RANBP3-230ENST00000593025 ZEB2O60315 1214 aa12.86□□□□□ -0.35
RANBP3-230ENST00000593025 BAIAP3O94812 1187 aa12.86□□□□□ -0.35
RANBP3-230ENST00000593025 SUPT20HL2P0C7V6 817 aa12.86□□□□□ -0.35
RANBP3-230ENST00000593025 SSTR3P32745 418 aaPredicted RBP12.86□□□□□ -0.35
RANBP3-230ENST00000593025 ERVK-21P61565 698 aa12.86□□□□□ -0.35
RANBP3-230ENST00000593025 NBPF20Q3BBV1 942 aa12.86□□□□□ -0.35
RANBP3-230ENST00000593025 DUSP28Q4G0W2 176 aa12.86□□□□□ -0.35
RANBP3-230ENST00000593025 MUM1L1Q5H9M0 696 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms