RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 AKNAD1Q5T1N1 836 aa22.23■■□□□ 1.15
CCDC43-205ENST00000592333 ZNF697Q5TEC3 545 aa22.23■■□□□ 1.15
CCDC43-205ENST00000592333 IQSEC1Q6DN90 963 aa22.23■■□□□ 1.15
CCDC43-205ENST00000592333 MFSD6Q6ZSS7 791 aa22.23■■□□□ 1.15
CCDC43-205ENST00000592333 CHD1LQ86WJ1 897 aa22.23■■□□□ 1.15
CCDC43-205ENST00000592333 MORC4Q8TE76 937 aa22.23■■□□□ 1.15
CCDC43-205ENST00000592333 TMEM47Q9BQJ4 181 aa22.23■■□□□ 1.15
CCDC43-205ENST00000592333 LNPKQ9C0E8 428 aa22.23■■□□□ 1.15
CCDC43-205ENST00000592333 MAF1Q9H063 256 aa22.23■■□□□ 1.15
CCDC43-205ENST00000592333 ADD3Q9UEY8 706 aaKnown RBP22.23■■□□□ 1.15
CCDC43-205ENST00000592333 CCPG1Q9ULG6 757 aa22.23■■□□□ 1.15
CCDC43-205ENST00000592333 A0A0U1RQG5 324 aaPredicted RBP22.22■■□□□ 1.15
CCDC43-205ENST00000592333 ADCY6O43306 1168 aa22.22■■□□□ 1.15
CCDC43-205ENST00000592333 TIMP1P01033 207 aa22.22■■□□□ 1.15
CCDC43-205ENST00000592333 ITGB8P26012 769 aa22.22■■□□□ 1.15
CCDC43-205ENST00000592333 FPGSQ05932 587 aa22.22■■□□□ 1.15
CCDC43-205ENST00000592333 CCDC96Q2M329 555 aa22.22■■□□□ 1.15
CCDC43-205ENST00000592333 CCDC178Q5BJE1 867 aa22.22■■□□□ 1.15
CCDC43-205ENST00000592333 CCDC174Q6PII3 467 aa22.22■■□□□ 1.15
CCDC43-205ENST00000592333 GNEQ9Y223 722 aaKnown RBP22.22■■□□□ 1.15
CCDC43-205ENST00000592333 LAMA2P24043 3122 aaKnown RBP22.22■■□□□ 1.15
CCDC43-205ENST00000592333 TMEM265A0A087WTH1 108 aa22.21■■□□□ 1.15
CCDC43-205ENST00000592333 MYADML2A6NDP7 307 aa22.21■■□□□ 1.15
CCDC43-205ENST00000592333 ARVCFO00192 962 aa22.21■■□□□ 1.15
CCDC43-205ENST00000592333 HIP1O00291 1037 aa22.21■■□□□ 1.15
CCDC43-205ENST00000592333 SDSP20132 328 aa22.21■■□□□ 1.15
CCDC43-205ENST00000592333 NUCB1Q02818 461 aa22.21■■□□□ 1.15
CCDC43-205ENST00000592333 ZNF589Q86UQ0 364 aaPredicted RBP22.21■■□□□ 1.15
CCDC43-205ENST00000592333 RILPL2Q969X0 211 aa22.21■■□□□ 1.15
CCDC43-205ENST00000592333 VTA1Q9NP79 307 aa22.21■■□□□ 1.15
CCDC43-205ENST00000592333 TBX21Q9UL17 535 aa22.21■■□□□ 1.15
CCDC43-205ENST00000592333 MCM3APO60318 1980 aa22.2■■□□□ 1.14
CCDC43-205ENST00000592333 CTAGE5O15320 804 aa22.2■■□□□ 1.14
CCDC43-205ENST00000592333 ZEB2O60315 1214 aa22.2■■□□□ 1.14
CCDC43-205ENST00000592333 SNHG28P0DPA3 235 aa22.2■■□□□ 1.14
CCDC43-205ENST00000592333 MUM1L1Q5H9M0 696 aa22.2■■□□□ 1.14
CCDC43-205ENST00000592333 RRP12Q5JTH9 1297 aaKnown RBP22.2■■□□□ 1.14
CCDC43-205ENST00000592333 SYDE2Q5VT97 1194 aa22.2■■□□□ 1.14
CCDC43-205ENST00000592333 DGKHQ86XP1 1220 aa22.2■■□□□ 1.14
CCDC43-205ENST00000592333 ESR2Q92731 530 aa22.2■■□□□ 1.14
CCDC43-205ENST00000592333 TLR3O15455 904 aaKnown RBP22.19■■□□□ 1.14
CCDC43-205ENST00000592333 PDHBP11177 359 aa22.19■■□□□ 1.14
CCDC43-205ENST00000592333 GPATCH4Q5T3I0 446 aaKnown RBP22.19■■□□□ 1.14
CCDC43-205ENST00000592333 MFSD5Q6N075 450 aa22.19■■□□□ 1.14
CCDC43-205ENST00000592333 PLEKHM2Q8IWE5 1019 aa22.19■■□□□ 1.14
CCDC43-205ENST00000592333 VTI1AQ96AJ9 217 aa22.19■■□□□ 1.14
CCDC43-205ENST00000592333 GUCD1Q96NT3 240 aa22.19■■□□□ 1.14
CCDC43-205ENST00000592333 AP5M1Q9H0R1 490 aa22.19■■□□□ 1.14
CCDC43-205ENST00000592333 WDR19Q8NEZ3 1342 aa22.19■■□□□ 1.14
CCDC43-205ENST00000592333 ZNF213O14771 459 aa22.18■■□□□ 1.14
CCDC43-205ENST00000592333 TAPT1Q6NXT6 567 aa22.18■■□□□ 1.14
CCDC43-205ENST00000592333 NSMFQ6X4W1 530 aa22.18■■□□□ 1.14
CCDC43-205ENST00000592333 TLK2Q86UE8 772 aa22.18■■□□□ 1.14
CCDC43-205ENST00000592333 FAM126BQ8IXS8 530 aa22.18■■□□□ 1.14
CCDC43-205ENST00000592333 SLC43A3Q8NBI5 491 aa22.18■■□□□ 1.14
CCDC43-205ENST00000592333 RNPC3Q96LT9 517 aaKnown RBP22.18■■□□□ 1.14
CCDC43-205ENST00000592333 MPHOSPH6Q99547 160 aaKnown RBP22.18■■□□□ 1.14
CCDC43-205ENST00000592333 ASTN1O14525 1302 aa22.17■■□□□ 1.14
CCDC43-205ENST00000592333 ZNF543Q08ER8 600 aa22.17■■□□□ 1.14
CCDC43-205ENST00000592333 PPIGQ13427 754 aaKnown RBP eCLIP22.17■■□□□ 1.14
CCDC43-205ENST00000592333 FSCN1Q16658 493 aaKnown RBP22.17■■□□□ 1.14
CCDC43-205ENST00000592333 TTBK2Q6IQ55 1244 aa22.17■■□□□ 1.14
CCDC43-205ENST00000592333 NOL8Q76FK4 1167 aaKnown RBP22.17■■□□□ 1.14
CCDC43-205ENST00000592333 SEMA6BQ9H3T3 888 aa22.17■■□□□ 1.14
CCDC43-205ENST00000592333 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.16■■□□□ 1.14
CCDC43-205ENST00000592333 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.16■■□□□ 1.14
CCDC43-205ENST00000592333 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.16■■□□□ 1.14
CCDC43-205ENST00000592333 CD4P01730 458 aa22.16■■□□□ 1.14
CCDC43-205ENST00000592333 SMPD1P17405 629 aa22.16■■□□□ 1.14
CCDC43-205ENST00000592333 SLC16A2P36021 539 aa22.16■■□□□ 1.14
CCDC43-205ENST00000592333 B4GALNT3Q6L9W6 998 aa22.16■■□□□ 1.14
CCDC43-205ENST00000592333 IQCA1Q86XH1 822 aa22.16■■□□□ 1.14
CCDC43-205ENST00000592333 TMEM199Q8N511 208 aa22.16■■□□□ 1.14
CCDC43-205ENST00000592333 RGS22Q8NE09 1264 aa22.16■■□□□ 1.14
CCDC43-205ENST00000592333 ANKS1AQ92625 1134 aa22.16■■□□□ 1.14
CCDC43-205ENST00000592333 MTMR7Q9Y216 660 aa22.16■■□□□ 1.14
CCDC43-205ENST00000592333 RBM47A0AV96 593 aaKnown RBP22.15■■□□□ 1.14
CCDC43-205ENST00000592333 B4DLN1 442 aa22.15■■□□□ 1.14
CCDC43-205ENST00000592333 ALDH5A1P51649 535 aaPredicted RBP22.15■■□□□ 1.14
CCDC43-205ENST00000592333 MRPL12P52815 198 aaKnown RBP22.15■■□□□ 1.14
CCDC43-205ENST00000592333 SNAP25P60880 206 aa22.15■■□□□ 1.14
CCDC43-205ENST00000592333 HAND2P61296 217 aa22.15■■□□□ 1.14
CCDC43-205ENST00000592333 BAATQ14032 418 aaPredicted RBP22.15■■□□□ 1.14
CCDC43-205ENST00000592333 DUSP28Q4G0W2 176 aa22.15■■□□□ 1.14
CCDC43-205ENST00000592333 RASGRP2Q7LDG7 609 aa22.15■■□□□ 1.14
CCDC43-205ENST00000592333 TBC1D10CQ8IV04 446 aa22.15■■□□□ 1.14
CCDC43-205ENST00000592333 DNERQ8NFT8 737 aa22.15■■□□□ 1.14
CCDC43-205ENST00000592333 CHMP4CQ96CF2 233 aa22.15■■□□□ 1.14
CCDC43-205ENST00000592333 DSCC1Q9BVC3 393 aa22.15■■□□□ 1.14
CCDC43-205ENST00000592333 DIAPH3Q9NSV4 1193 aa22.15■■□□□ 1.14
CCDC43-205ENST00000592333 CTNNA3Q9UI47 895 aa22.15■■□□□ 1.14
CCDC43-205ENST00000592333 DLL1O00548 723 aa22.14■■□□□ 1.13
CCDC43-205ENST00000592333 DYNC1LI2O43237 492 aaPredicted RBP22.14■■□□□ 1.13
CCDC43-205ENST00000592333 IGHDP01880 384 aa22.14■■□□□ 1.13
CCDC43-205ENST00000592333 EPHB4P54760 987 aa22.14■■□□□ 1.13
CCDC43-205ENST00000592333 GPCPD1Q9NPB8 672 aa22.14■■□□□ 1.13
CCDC43-205ENST00000592333 LRRC37A2A6NM11 1700 aa22.14■■□□□ 1.13
CCDC43-205ENST00000592333 FRMPD2Q68DX3 1309 aaPredicted RBP22.13■■□□□ 1.13
CCDC43-205ENST00000592333 NFIBO00712 420 aa22.13■■□□□ 1.13
CCDC43-205ENST00000592333 IRX5P78411 483 aaPredicted RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms