RNA–Protein interactions for RNA: ENST00000591107.6

NPC1-212, Transcript of NPC intracellular cholesterol transporter 1, human

TSL 3

Gene NPC1, Length 890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPC1-212	ENST00000591107	PATL2	C9JE40	543 aa	Known RBP	15.72	■□□□□ 0.11
NPC1-212	ENST00000591107	KIAA0355	O15063	1070 aa		15.72	■□□□□ 0.11
NPC1-212	ENST00000591107	BMP3	P12645	472 aa		15.72	■□□□□ 0.11
NPC1-212	ENST00000591107	GNAT2	P19087	354 aa		15.72	■□□□□ 0.11
NPC1-212	ENST00000591107	FPGS	Q05932	587 aa		15.72	■□□□□ 0.11
NPC1-212	ENST00000591107	ACVR2B	Q13705	512 aa		15.72	■□□□□ 0.11
NPC1-212	ENST00000591107	ZMYM1	Q5SVZ6	1142 aa		15.72	■□□□□ 0.11
NPC1-212	ENST00000591107	MAMDC4	Q6UXC1	1216 aa		15.72	■□□□□ 0.11
NPC1-212	ENST00000591107	CCDC144CP	Q8IYA2	1237 aa		15.72	■□□□□ 0.11
NPC1-212	ENST00000591107	GMCL1P1	Q8NEA9	526 aa		15.72	■□□□□ 0.11
NPC1-212	ENST00000591107	NEDD1	Q8NHV4	660 aa		15.72	■□□□□ 0.11
NPC1-212	ENST00000591107	PURB	Q96QR8	312 aa	Known RBP	15.72	■□□□□ 0.11
NPC1-212	ENST00000591107	PPP1R12C	Q9BZL4	782 aa		15.72	■□□□□ 0.11
NPC1-212	ENST00000591107	KATNBL1	Q9H079	304 aa		15.72	■□□□□ 0.11
NPC1-212	ENST00000591107	A1CF	Q9NQ94	594 aa	Known RBP	15.72	■□□□□ 0.11
NPC1-212	ENST00000591107	RNF146	Q9NTX7	359 aa		15.72	■□□□□ 0.11
NPC1-212	ENST00000591107	FEM1B	Q9UK73	627 aa		15.72	■□□□□ 0.11
NPC1-212	ENST00000591107	VCAN	P13611	3396 aa		15.72	■□□□□ 0.11
NPC1-212	ENST00000591107	ZNF536	O15090	1300 aa		15.71	■□□□□ 0.11
NPC1-212	ENST00000591107	TTC41P	Q6P2S7	1318 aa		15.71	■□□□□ 0.11
NPC1-212	ENST00000591107	ATP2A1	O14983	1001 aa		15.71	■□□□□ 0.11
NPC1-212	ENST00000591107	ASGR1	P07306	291 aa		15.71	■□□□□ 0.11
NPC1-212	ENST00000591107	MX1	P20591	662 aa		15.71	■□□□□ 0.11
NPC1-212	ENST00000591107	MCC	P23508	829 aa		15.71	■□□□□ 0.11
NPC1-212	ENST00000591107	TMEM63B	Q5T3F8	832 aa		15.71	■□□□□ 0.11
NPC1-212	ENST00000591107	MAFA	Q8NHW3	353 aa	Predicted RBP	15.71	■□□□□ 0.11
NPC1-212	ENST00000591107	MKL1	Q969V6	931 aa		15.71	■□□□□ 0.11
NPC1-212	ENST00000591107	TBX21	Q9UL17	535 aa		15.71	■□□□□ 0.11
NPC1-212	ENST00000591107	STX8	Q9UNK0	236 aa		15.71	■□□□□ 0.11
NPC1-212	ENST00000591107	SOWAHB	A6NEL2	793 aa		15.7	■□□□□ 0.1
NPC1-212	ENST00000591107	CTAGE5	O15320	804 aa		15.7	■□□□□ 0.1
NPC1-212	ENST00000591107	DUSP11	O75319	330 aa	Known RBP	15.7	■□□□□ 0.1
NPC1-212	ENST00000591107	IGHD	P01880	384 aa		15.7	■□□□□ 0.1
NPC1-212	ENST00000591107	ALAS1	P13196	640 aa		15.7	■□□□□ 0.1
NPC1-212	ENST00000591107	PDE4B	Q07343	736 aa		15.7	■□□□□ 0.1
NPC1-212	ENST00000591107	MUM1L1	Q5H9M0	696 aa		15.7	■□□□□ 0.1
NPC1-212	ENST00000591107	EEPD1	Q7L9B9	569 aa		15.7	■□□□□ 0.1
NPC1-212	ENST00000591107	VTI1A	Q96AJ9	217 aa		15.7	■□□□□ 0.1
NPC1-212	ENST00000591107	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	15.7	■□□□□ 0.1	2e-9	■■■□□ 14.6
NPC1-212	ENST00000591107	NACAP1	Q9BZK3	213 aa		15.7	■□□□□ 0.1
NPC1-212	ENST00000591107	ACAD9	Q9H845	621 aa		15.7	■□□□□ 0.1
NPC1-212	ENST00000591107	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	15.7	■□□□□ 0.1
NPC1-212	ENST00000591107	SPTBN5	Q9NRC6	3674 aa	Known RBP	15.7	■□□□□ 0.1
NPC1-212	ENST00000591107	SALL3	Q9BXA9	1300 aa		15.69	■□□□□ 0.1
NPC1-212	ENST00000591107	GRXCR1	A8MXD5	290 aa		15.69	■□□□□ 0.1
NPC1-212	ENST00000591107	ACR	P10323	421 aa		15.69	■□□□□ 0.1
NPC1-212	ENST00000591107	FOSL2	P15408	326 aa		15.69	■□□□□ 0.1
NPC1-212	ENST00000591107	SLC1A4	P43007	532 aa		15.69	■□□□□ 0.1
NPC1-212	ENST00000591107	STAT2	P52630	851 aa		15.69	■□□□□ 0.1
NPC1-212	ENST00000591107	SMAD3	P84022	425 aa	Known RBP	15.69	■□□□□ 0.1
NPC1-212	ENST00000591107	ANKRD33	Q7Z3H0	272 aa		15.69	■□□□□ 0.1
NPC1-212	ENST00000591107	FBXO16	Q8IX29	292 aa	Predicted RBP	15.69	■□□□□ 0.1
NPC1-212	ENST00000591107	MSL3	Q8N5Y2	521 aa	Known RBP	15.69	■□□□□ 0.1
NPC1-212	ENST00000591107	FAM133A	Q8N9E0	248 aa		15.69	■□□□□ 0.1
NPC1-212	ENST00000591107	CHST13	Q8NET6	341 aa		15.69	■□□□□ 0.1
NPC1-212	ENST00000591107	GLT1D1	Q96MS3	346 aa		15.69	■□□□□ 0.1
NPC1-212	ENST00000591107	TSEN34	Q9BSV6	310 aa	Known RBP	15.69	■□□□□ 0.1
NPC1-212	ENST00000591107	UPF3A	Q9H1J1	476 aa	Known RBP	15.69	■□□□□ 0.1
NPC1-212	ENST00000591107	RWDD1	Q9H446	243 aa	Predicted RBP	15.69	■□□□□ 0.1
NPC1-212	ENST00000591107	IL17RB	Q9NRM6	502 aa		15.69	■□□□□ 0.1
NPC1-212	ENST00000591107	UMODL1	Q5DID0	1318 aa		15.68	■□□□□ 0.1
NPC1-212	ENST00000591107	MOXD2P	A6NHM9	499 aa		15.68	■□□□□ 0.1
NPC1-212	ENST00000591107	TSPY2	A6NKD2	308 aa		15.68	■□□□□ 0.1
NPC1-212	ENST00000591107	DCDC2C	A8MYV0	355 aa		15.68	■□□□□ 0.1
NPC1-212	ENST00000591107	RBAK-RBAKDN	I3L0D1	243 aa		15.68	■□□□□ 0.1
NPC1-212	ENST00000591107	ERC2	O15083	957 aa		15.68	■□□□□ 0.1
NPC1-212	ENST00000591107	CST5	P28325	142 aa	Predicted RBP	15.68	■□□□□ 0.1
NPC1-212	ENST00000591107	PBX2	P40425	430 aa		15.68	■□□□□ 0.1
NPC1-212	ENST00000591107	HDAC1	Q13547	482 aa	Predicted RBP	15.68	■□□□□ 0.1
NPC1-212	ENST00000591107	CCDC96	Q2M329	555 aa		15.68	■□□□□ 0.1
NPC1-212	ENST00000591107	NOL8	Q76FK4	1167 aa	Known RBP	15.68	■□□□□ 0.1
NPC1-212	ENST00000591107	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	15.68	■□□□□ 0.1
NPC1-212	ENST00000591107	USP38	Q8NB14	1042 aa		15.68	■□□□□ 0.1
NPC1-212	ENST00000591107	NUP133	Q8WUM0	1156 aa		15.68	■□□□□ 0.1
NPC1-212	ENST00000591107	ABHD16B	Q9H3Z7	469 aa		15.68	■□□□□ 0.1
NPC1-212	ENST00000591107	ZNF287	Q9HBT7	754 aa		15.68	■□□□□ 0.1
NPC1-212	ENST00000591107	PDGFC	Q9NRA1	345 aa		15.68	■□□□□ 0.1
NPC1-212	ENST00000591107	FBXO40	Q9UH90	709 aa		15.68	■□□□□ 0.1
NPC1-212	ENST00000591107	FRMPD2	Q68DX3	1309 aa	Predicted RBP	15.68	■□□□□ 0.1
NPC1-212	ENST00000591107		A0A0D9SFI3	127 aa		15.67	■□□□□ 0.1
NPC1-212	ENST00000591107	RANBP6	O60518	1105 aa	Known RBP	15.67	■□□□□ 0.1
NPC1-212	ENST00000591107	CSF2RA	P15509	400 aa		15.67	■□□□□ 0.1
NPC1-212	ENST00000591107	DNAJB2	P25686	324 aa		15.67	■□□□□ 0.1
NPC1-212	ENST00000591107	SLC16A2	P36021	539 aa		15.67	■□□□□ 0.1
NPC1-212	ENST00000591107	OAZ1	P54368	228 aa		15.67	■□□□□ 0.1
NPC1-212	ENST00000591107	GJA9	P57773	515 aa		15.67	■□□□□ 0.1
NPC1-212	ENST00000591107	GRIN2C	Q14957	1233 aa		15.67	■□□□□ 0.1
NPC1-212	ENST00000591107	GNAS	Q5JWF2	1037 aa		15.67	■□□□□ 0.1
NPC1-212	ENST00000591107	TTBK2	Q6IQ55	1244 aa		15.67	■□□□□ 0.1
NPC1-212	ENST00000591107	CXCL17	Q6UXB2	119 aa		15.67	■□□□□ 0.1
NPC1-212	ENST00000591107	NSMF	Q6X4W1	530 aa		15.67	■□□□□ 0.1
NPC1-212	ENST00000591107	C16orf59	Q7L2K0	433 aa		15.67	■□□□□ 0.1
NPC1-212	ENST00000591107	CENPQ	Q7L2Z9	268 aa	Predicted RBP	15.67	■□□□□ 0.1
NPC1-212	ENST00000591107	TLK2	Q86UE8	772 aa		15.67	■□□□□ 0.1
NPC1-212	ENST00000591107	FAM126B	Q8IXS8	530 aa		15.67	■□□□□ 0.1
NPC1-212	ENST00000591107	PPP1R13L	Q8WUF5	828 aa		15.67	■□□□□ 0.1
NPC1-212	ENST00000591107	GMCL1	Q96IK5	515 aa		15.67	■□□□□ 0.1
NPC1-212	ENST00000591107	FAM227B	Q96M60	508 aa		15.67	■□□□□ 0.1
NPC1-212	ENST00000591107	TRERF1	Q96PN7	1200 aa		15.67	■□□□□ 0.1
NPC1-212	ENST00000591107	TOMM22	Q9NS69	142 aa		15.67	■□□□□ 0.1

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