RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 ZBED4O75132 1171 aa15.33■□□□□ 0.04
PRKCSH-210ENST00000589990 CYP2C9P11712 490 aa15.33■□□□□ 0.04
PRKCSH-210ENST00000589990 TMEM31Q5JXX7 168 aa15.33■□□□□ 0.04
PRKCSH-210ENST00000589990 DEFB128Q7Z7B8 93 aa15.33■□□□□ 0.04
PRKCSH-210ENST00000589990 ERC1Q8IUD2 1116 aa15.33■□□□□ 0.04
PRKCSH-210ENST00000589990 PURBQ96QR8 312 aaKnown RBP15.33■□□□□ 0.04
PRKCSH-210ENST00000589990 TRMT13Q9NUP7 481 aaKnown RBP15.33■□□□□ 0.04
PRKCSH-210ENST00000589990 HCN4Q9Y3Q4 1203 aa15.33■□□□□ 0.04
PRKCSH-210ENST00000589990 POU3F3P20264 500 aaPredicted RBP15.32■□□□□ 0.04
PRKCSH-210ENST00000589990 AAK1Q2M2I8 961 aa15.32■□□□□ 0.04
PRKCSH-210ENST00000589990 EEPD1Q7L9B9 569 aa15.32■□□□□ 0.04
PRKCSH-210ENST00000589990 FTSJ3Q8IY81 847 aaKnown RBP15.32■□□□□ 0.04
PRKCSH-210ENST00000589990 LRRC47Q8N1G4 583 aaKnown RBP15.32■□□□□ 0.04
PRKCSH-210ENST00000589990 ARNTL2Q8WYA1 636 aa15.32■□□□□ 0.04
PRKCSH-210ENST00000589990 A1CFQ9NQ94 594 aaKnown RBP15.32■□□□□ 0.04
PRKCSH-210ENST00000589990 NYAP2Q9P242 653 aa15.32■□□□□ 0.04
PRKCSH-210ENST00000589990 CLIP2Q9UDT6 1046 aa15.32■□□□□ 0.04
PRKCSH-210ENST00000589990 PTPRSQ13332 1948 aa15.32■□□□□ 0.04
PRKCSH-210ENST00000589990 IGKV6D-41A0A0C4DH26 115 aa15.31■□□□□ 0.04
PRKCSH-210ENST00000589990 TAP1Q03518 808 aa15.31■□□□□ 0.04
PRKCSH-210ENST00000589990 TMEM67Q5HYA8 995 aa15.31■□□□□ 0.04
PRKCSH-210ENST00000589990 TAPT1Q6NXT6 567 aa15.31■□□□□ 0.04
PRKCSH-210ENST00000589990 FBXO16Q8IX29 292 aaPredicted RBP15.31■□□□□ 0.04
PRKCSH-210ENST00000589990 AMOTL1Q8IY63 956 aa15.31■□□□□ 0.04
PRKCSH-210ENST00000589990 CHST13Q8NET6 341 aa15.31■□□□□ 0.04
PRKCSH-210ENST00000589990 ALDH8A1Q9H2A2 487 aaPredicted RBP15.31■□□□□ 0.04
PRKCSH-210ENST00000589990 ZNF536O15090 1300 aa15.31■□□□□ 0.04
PRKCSH-210ENST00000589990 TET1Q8NFU7 2136 aa15.31■□□□□ 0.04
PRKCSH-210ENST00000589990 LPXNO60711 386 aa15.3■□□□□ 0.04
PRKCSH-210ENST00000589990 PRDM1O75626 825 aa15.3■□□□□ 0.04
PRKCSH-210ENST00000589990 CABYRO75952 493 aa15.3■□□□□ 0.04
PRKCSH-210ENST00000589990 IFIT2P09913 472 aaKnown RBP15.3■□□□□ 0.04
PRKCSH-210ENST00000589990 SNAP25P60880 206 aa15.3■□□□□ 0.04
PRKCSH-210ENST00000589990 RPUSD2Q8IZ73 545 aaKnown RBP15.3■□□□□ 0.04
PRKCSH-210ENST00000589990 FBXO40Q9UH90 709 aa15.3■□□□□ 0.04
PRKCSH-210ENST00000589990 ARIH1Q9Y4X5 557 aaPredicted RBP15.3■□□□□ 0.04
PRKCSH-210ENST00000589990 CTDP1Q9Y5B0 961 aaPredicted RBP15.3■□□□□ 0.04
PRKCSH-210ENST00000589990 MINDY4BA8MYZ0 360 aa15.29■□□□□ 0.04
PRKCSH-210ENST00000589990 GTPBP6O43824 516 aaPredicted RBP15.29■□□□□ 0.04
PRKCSH-210ENST00000589990 GRB10Q13322 594 aa15.29■□□□□ 0.04
PRKCSH-210ENST00000589990 UBE3CQ15386 1083 aa15.29■□□□□ 0.04
PRKCSH-210ENST00000589990 RASGRP2Q7LDG7 609 aa15.29■□□□□ 0.04
PRKCSH-210ENST00000589990 TMCO2Q7Z6W1 182 aaPredicted RBP15.29■□□□□ 0.04
PRKCSH-210ENST00000589990 ALYREFQ86V81 257 aaKnown RBP15.29■□□□□ 0.04
PRKCSH-210ENST00000589990 SIRT2Q8IXJ6 389 aa15.29■□□□□ 0.04
PRKCSH-210ENST00000589990 CLASRPQ8N2M8 674 aaKnown RBP15.29■□□□□ 0.04
PRKCSH-210ENST00000589990 PANK1Q8TE04 598 aa15.29■□□□□ 0.04
PRKCSH-210ENST00000589990 CEP95Q96GE4 821 aa15.29■□□□□ 0.04
PRKCSH-210ENST00000589990 AP5M1Q9H0R1 490 aa15.29■□□□□ 0.04
PRKCSH-210ENST00000589990 RNF146Q9NTX7 359 aa15.29■□□□□ 0.04
PRKCSH-210ENST00000589990 WDFY4Q6ZS81 3184 aa15.29■□□□□ 0.04
PRKCSH-210ENST00000589990 TNKSO95271 1327 aa15.28■□□□□ 0.04
PRKCSH-210ENST00000589990 LCHNA4D1U4 455 aa15.28■□□□□ 0.04
PRKCSH-210ENST00000589990 GSG1L2A8MUP6 293 aa15.28■□□□□ 0.04
PRKCSH-210ENST00000589990 GPR37L1O60883 481 aa15.28■□□□□ 0.04
PRKCSH-210ENST00000589990 MUM1L1Q5H9M0 696 aa15.28■□□□□ 0.04
PRKCSH-210ENST00000589990 MIER1Q8N108 512 aa15.28■□□□□ 0.04
PRKCSH-210ENST00000589990 HLA-CQ95604 372 aa15.28■□□□□ 0.04
PRKCSH-210ENST00000589990 KIF1BPQ96EK5 621 aa15.28■□□□□ 0.04
PRKCSH-210ENST00000589990 STRBPQ96SI9 672 aaKnown RBP15.28■□□□□ 0.04
PRKCSH-210ENST00000589990 HAUS7Q99871 368 aa15.28■□□□□ 0.04
PRKCSH-210ENST00000589990 ACAD9Q9H845 621 aa15.28■□□□□ 0.04
PRKCSH-210ENST00000589990 MKNK2Q9HBH9 465 aa15.28■□□□□ 0.04
PRKCSH-210ENST00000589990 ARPP21Q9UBL0 812 aaPredicted RBP15.28■□□□□ 0.04
PRKCSH-210ENST00000589990 FEM1BQ9UK73 627 aa15.28■□□□□ 0.04
PRKCSH-210ENST00000589990 COG5Q9UP83 839 aa15.28■□□□□ 0.04
PRKCSH-210ENST00000589990 TANC1Q9C0D5 1861 aa15.27■□□□□ 0.04
PRKCSH-210ENST00000589990 TMEM232C9JQI7 657 aa15.27■□□□□ 0.04
PRKCSH-210ENST00000589990 ATP5JP18859 108 aa15.27■□□□□ 0.04
PRKCSH-210ENST00000589990 OAZ1P54368 228 aa15.27■□□□□ 0.04
PRKCSH-210ENST00000589990 MKL1Q969V6 931 aa15.27■□□□□ 0.04
PRKCSH-210ENST00000589990 DDRGK1Q96HY6 314 aa15.27■□□□□ 0.04
PRKCSH-210ENST00000589990 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.27■□□□□ 0.042e-11■■■□□ 15.9
PRKCSH-210ENST00000589990 EPB41L4AQ9HCS5 686 aaPredicted RBP15.27■□□□□ 0.04
PRKCSH-210ENST00000589990 MTMR4Q9NYA4 1195 aa15.27■□□□□ 0.04
PRKCSH-210ENST00000589990 ASB14A6NK59 587 aa15.26■□□□□ 0.03
PRKCSH-210ENST00000589990 BMP3P12645 472 aa15.26■□□□□ 0.03
PRKCSH-210ENST00000589990 ALAS1P13196 640 aa15.26■□□□□ 0.03
PRKCSH-210ENST00000589990 SBK1Q52WX2 424 aa15.26■□□□□ 0.03
PRKCSH-210ENST00000589990 SLFN13Q68D06 897 aa15.26■□□□□ 0.03
PRKCSH-210ENST00000589990 HERC6Q8IVU3 1022 aa15.26■□□□□ 0.03
PRKCSH-210ENST00000589990 TRERF1Q96PN7 1200 aa15.26■□□□□ 0.03
PRKCSH-210ENST00000589990 COG6Q9Y2V7 657 aa15.26■□□□□ 0.03
PRKCSH-210ENST00000589990 PURAQ00577 322 aaKnown RBP15.25■□□□□ 0.03
PRKCSH-210ENST00000589990 HSP90AB4PQ58FF6 505 aa15.25■□□□□ 0.03
PRKCSH-210ENST00000589990 IQSEC1Q6DN90 963 aa15.25■□□□□ 0.03
PRKCSH-210ENST00000589990 KIAA1211Q6ZU35 1233 aa15.25■□□□□ 0.03
PRKCSH-210ENST00000589990 GDPD5Q8WTR4 605 aa15.25■□□□□ 0.03
PRKCSH-210ENST00000589990 SLC9A7Q96T83 725 aa15.25■□□□□ 0.03
PRKCSH-210ENST00000589990 CYP39A1Q9NYL5 469 aa15.25■□□□□ 0.03
PRKCSH-210ENST00000589990 ISY1Q9ULR0 285 aaKnown RBP15.25■□□□□ 0.03
PRKCSH-210ENST00000589990 SCN10AQ9Y5Y9 1956 aa15.24■□□□□ 0.03
PRKCSH-210ENST00000589990 PI4K2BG5E9Z4 385 aa15.24■□□□□ 0.03
PRKCSH-210ENST00000589990 CCER2I3L3R5 266 aa15.24■□□□□ 0.03
PRKCSH-210ENST00000589990 ZEB2O60315 1214 aa15.24■□□□□ 0.03
PRKCSH-210ENST00000589990 PFKMP08237 780 aa15.24■□□□□ 0.03
PRKCSH-210ENST00000589990 MYL3P08590 195 aa15.24■□□□□ 0.03
PRKCSH-210ENST00000589990 IQCF3P0C7M6 154 aa15.24■□□□□ 0.03
PRKCSH-210ENST00000589990 GMCL1P1Q8NEA9 526 aa15.24■□□□□ 0.03
PRKCSH-210ENST00000589990 OSBP2Q969R2 916 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms