RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 TNFAIP2Q03169 654 aa19.24■□□□□ 0.67
MBD3-206ENST00000589901 TTBK2Q6IQ55 1244 aa19.24■□□□□ 0.67
MBD3-206ENST00000589901 NOL8Q76FK4 1167 aaKnown RBP19.24■□□□□ 0.67
MBD3-206ENST00000589901 YTHDC1Q96MU7 727 aaKnown RBP19.24■□□□□ 0.67
MBD3-206ENST00000589901 PURBQ96QR8 312 aaKnown RBP19.24■□□□□ 0.67
MBD3-206ENST00000589901 CDX2Q99626 313 aaPredicted RBP19.24■□□□□ 0.67
MBD3-206ENST00000589901 TTYH1Q9H313 450 aaPredicted RBP19.24■□□□□ 0.67
MBD3-206ENST00000589901 CYP39A1Q9NYL5 469 aa19.24■□□□□ 0.67
MBD3-206ENST00000589901 TBX21Q9UL17 535 aa19.24■□□□□ 0.67
MBD3-206ENST00000589901 CCPG1Q9ULG6 757 aa19.24■□□□□ 0.67
MBD3-206ENST00000589901 CUL9Q8IWT3 2517 aa19.23■□□□□ 0.67
MBD3-206ENST00000589901 TIMP1P01033 207 aa19.23■□□□□ 0.67
MBD3-206ENST00000589901 HSPD1P10809 573 aaKnown RBP19.23■□□□□ 0.67
MBD3-206ENST00000589901 NMIQ13287 307 aaPredicted RBP19.23■□□□□ 0.67
MBD3-206ENST00000589901 NSMFQ6X4W1 530 aa19.23■□□□□ 0.67
MBD3-206ENST00000589901 DCAF4Q8WV16 495 aa19.23■□□□□ 0.67
MBD3-206ENST00000589901 LNPKQ9C0E8 428 aa19.23■□□□□ 0.67
MBD3-206ENST00000589901 PRUNE2Q8WUY3 3088 aa19.23■□□□□ 0.67
MBD3-206ENST00000589901 A0A0U1RQG5 324 aaPredicted RBP19.22■□□□□ 0.67
MBD3-206ENST00000589901 ARVCFO00192 962 aa19.22■□□□□ 0.67
MBD3-206ENST00000589901 ICAM1P05362 532 aa19.22■□□□□ 0.67
MBD3-206ENST00000589901 HAND2P61296 217 aa19.22■□□□□ 0.67
MBD3-206ENST00000589901 NKX3-2P78367 333 aa19.22■□□□□ 0.67
MBD3-206ENST00000589901 EEPD1Q7L9B9 569 aa19.22■□□□□ 0.67
MBD3-206ENST00000589901 TMEM47Q9BQJ4 181 aa19.22■□□□□ 0.67
MBD3-206ENST00000589901 RANBP17Q9H2T7 1088 aaKnown RBP19.22■□□□□ 0.67
MBD3-206ENST00000589901 PDGFCQ9NRA1 345 aa19.22■□□□□ 0.67
MBD3-206ENST00000589901 GNEQ9Y223 722 aaKnown RBP19.22■□□□□ 0.67
MBD3-206ENST00000589901 MROH7Q68CQ1 1323 aa19.22■□□□□ 0.67
MBD3-206ENST00000589901 FRMPD2Q68DX3 1309 aaPredicted RBP19.22■□□□□ 0.67
MBD3-206ENST00000589901 MCM3APO60318 1980 aa19.21■□□□□ 0.67
MBD3-206ENST00000589901 TRIM6-TRIM34B2RNG4 842 aa19.21■□□□□ 0.67
MBD3-206ENST00000589901 TOP1P11387 765 aaKnown RBP19.21■□□□□ 0.67
MBD3-206ENST00000589901 SMPD1P17405 629 aa19.21■□□□□ 0.67
MBD3-206ENST00000589901 TMEM63BQ5T3F8 832 aa19.21■□□□□ 0.67
MBD3-206ENST00000589901 BTNL9Q6UXG8 535 aa19.21■□□□□ 0.67
MBD3-206ENST00000589901 TLK2Q86UE8 772 aa19.21■□□□□ 0.67
MBD3-206ENST00000589901 FBXO16Q8IX29 292 aaPredicted RBP19.21■□□□□ 0.67
MBD3-206ENST00000589901 FAM126BQ8IXS8 530 aa19.21■□□□□ 0.67
MBD3-206ENST00000589901 GPCPD1Q9NPB8 672 aa19.21■□□□□ 0.67
MBD3-206ENST00000589901 SYDE2Q5VT97 1194 aa19.2■□□□□ 0.66
MBD3-206ENST00000589901 B4GALNT3Q6L9W6 998 aa19.2■□□□□ 0.66
MBD3-206ENST00000589901 MFSD5Q6N075 450 aa19.2■□□□□ 0.66
MBD3-206ENST00000589901 TAPT1Q6NXT6 567 aa19.2■□□□□ 0.66
MBD3-206ENST00000589901 CXCL17Q6UXB2 119 aa19.2■□□□□ 0.66
MBD3-206ENST00000589901 MYLIPQ8WY64 445 aa19.2■□□□□ 0.66
MBD3-206ENST00000589901 RILPL2Q969X0 211 aa19.2■□□□□ 0.66
MBD3-206ENST00000589901 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.2■□□□□ 0.66
MBD3-206ENST00000589901 TCP11L1Q9NUJ3 509 aa19.2■□□□□ 0.66
MBD3-206ENST00000589901 CCDC171Q6TFL3 1326 aa19.2■□□□□ 0.66
MBD3-206ENST00000589901 NFIBO00712 420 aa19.19■□□□□ 0.66
MBD3-206ENST00000589901 DYNC1LI2O43237 492 aaPredicted RBP19.19■□□□□ 0.66
MBD3-206ENST00000589901 BAATQ14032 418 aaPredicted RBP19.19■□□□□ 0.66
MBD3-206ENST00000589901 FSCN1Q16658 493 aaKnown RBP19.19■□□□□ 0.66
MBD3-206ENST00000589901 C16orf59Q7L2K0 433 aa19.19■□□□□ 0.66
MBD3-206ENST00000589901 TICAM2Q86XR7 235 aa19.19■□□□□ 0.66
MBD3-206ENST00000589901 TBC1D10CQ8IV04 446 aa19.19■□□□□ 0.66
MBD3-206ENST00000589901 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.19■□□□□ 0.66
MBD3-206ENST00000589901 PPP1R12CQ9BZL4 782 aa19.19■□□□□ 0.66
MBD3-206ENST00000589901 ZMYM6O95789 1325 aa19.19■□□□□ 0.66
MBD3-206ENST00000589901 VCANP13611 3396 aa19.18■□□□□ 0.66
MBD3-206ENST00000589901 PDHBP11177 359 aa19.18■□□□□ 0.66
MBD3-206ENST00000589901 CSF2RAP15509 400 aa19.18■□□□□ 0.66
MBD3-206ENST00000589901 AKNAD1Q5T1N1 836 aa19.18■□□□□ 0.66
MBD3-206ENST00000589901 IQSEC1Q6DN90 963 aa19.18■□□□□ 0.66
MBD3-206ENST00000589901 SMC5Q8IY18 1101 aa19.18■□□□□ 0.66
MBD3-206ENST00000589901 AP5M1Q9H0R1 490 aa19.18■□□□□ 0.66
MBD3-206ENST00000589901 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.17■□□□□ 0.66
MBD3-206ENST00000589901 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.17■□□□□ 0.66
MBD3-206ENST00000589901 TLR3O15455 904 aaKnown RBP19.17■□□□□ 0.66
MBD3-206ENST00000589901 CD4P01730 458 aa19.17■□□□□ 0.66
MBD3-206ENST00000589901 MFSD6Q6ZSS7 791 aa19.17■□□□□ 0.66
MBD3-206ENST00000589901 KIAA1211Q6ZU35 1233 aa19.17■□□□□ 0.66
MBD3-206ENST00000589901 SLC43A3Q8NBI5 491 aa19.17■□□□□ 0.66
MBD3-206ENST00000589901 MAFAQ8NHW3 353 aaPredicted RBP19.17■□□□□ 0.66
MBD3-206ENST00000589901 MORC4Q8TE76 937 aa19.17■□□□□ 0.66
MBD3-206ENST00000589901 VTA1Q9NP79 307 aa19.17■□□□□ 0.66
MBD3-206ENST00000589901 GRIN2DO15399 1336 aa19.17■□□□□ 0.66
MBD3-206ENST00000589901 PTPDC1A2A3K4 754 aa19.16■□□□□ 0.66
MBD3-206ENST00000589901 CABYRO75952 493 aa19.16■□□□□ 0.66
MBD3-206ENST00000589901 IGHDP01880 384 aa19.16■□□□□ 0.66
MBD3-206ENST00000589901 ACRP10323 421 aa19.16■□□□□ 0.66
MBD3-206ENST00000589901 SDSP20132 328 aa19.16■□□□□ 0.66
MBD3-206ENST00000589901 DNAJB2P25686 324 aa19.16■□□□□ 0.66
MBD3-206ENST00000589901 CYP2C18P33260 490 aa19.16■□□□□ 0.66
MBD3-206ENST00000589901 ALDH5A1P51649 535 aaPredicted RBP19.16■□□□□ 0.66
MBD3-206ENST00000589901 ZNF543Q08ER8 600 aa19.16■□□□□ 0.66
MBD3-206ENST00000589901 PPIGQ13427 754 aaKnown RBP eCLIP19.16■□□□□ 0.668e-27■□□□□ 8.4
MBD3-206ENST00000589901 ITGA7Q13683 1181 aa19.16■□□□□ 0.66
MBD3-206ENST00000589901 TMEM240Q5SV17 173 aa19.16■□□□□ 0.66
MBD3-206ENST00000589901 SLC30A10Q6XR72 485 aa19.16■□□□□ 0.66
MBD3-206ENST00000589901 TMEM199Q8N511 208 aa19.16■□□□□ 0.66
MBD3-206ENST00000589901 CLEC4DQ8WXI8 215 aa19.16■□□□□ 0.66
MBD3-206ENST00000589901 RWDD1Q9H446 243 aaPredicted RBP19.16■□□□□ 0.66
MBD3-206ENST00000589901 NEDD4P46934 1319 aa19.16■□□□□ 0.66
MBD3-206ENST00000589901 TMEM265A0A087WTH1 108 aa19.15■□□□□ 0.66
MBD3-206ENST00000589901 PSMC6P62333 389 aa19.15■□□□□ 0.66
MBD3-206ENST00000589901 CHD1LQ86WJ1 897 aa19.15■□□□□ 0.66
MBD3-206ENST00000589901 PLEKHM2Q8IWE5 1019 aa19.15■□□□□ 0.66
MBD3-206ENST00000589901 TTC14Q96N46 770 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms