RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 LAD1O00515 517 aa13.75□□□□□ -0.21
CCBE1-203ENST00000589116 WDR46O15213 610 aaKnown RBP13.75□□□□□ -0.21
CCBE1-203ENST00000589116 INPP5BP32019 993 aa13.75□□□□□ -0.21
CCBE1-203ENST00000589116 NDUFA8P51970 172 aa13.75□□□□□ -0.21
CCBE1-203ENST00000589116 KIAA1755Q5JYT7 1200 aa13.75□□□□□ -0.21
CCBE1-203ENST00000589116 FAM83BQ5T0W9 1011 aa13.75□□□□□ -0.21
CCBE1-203ENST00000589116 ARL6IP4Q66PJ3 421 aaKnown RBP13.75□□□□□ -0.21
CCBE1-203ENST00000589116 MCTP2Q6DN12 878 aa13.75□□□□□ -0.21
CCBE1-203ENST00000589116 USP50Q70EL3 339 aaPredicted RBP13.75□□□□□ -0.21
CCBE1-203ENST00000589116 FBXO11Q86XK2 927 aa13.75□□□□□ -0.21
CCBE1-203ENST00000589116 DCPSQ96C86 337 aaKnown RBP13.75□□□□□ -0.21
CCBE1-203ENST00000589116 TIGD1Q96MW7 591 aa13.75□□□□□ -0.21
CCBE1-203ENST00000589116 WRNIP1Q96S55 665 aa13.75□□□□□ -0.21
CCBE1-203ENST00000589116 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.75□□□□□ -0.21
CCBE1-203ENST00000589116 PCDHA1Q9Y5I3 950 aa13.75□□□□□ -0.21
CCBE1-203ENST00000589116 WNT7AO00755 349 aa13.74□□□□□ -0.21
CCBE1-203ENST00000589116 ITGBL1O95965 494 aaPredicted RBP13.74□□□□□ -0.21
CCBE1-203ENST00000589116 CCDC192P0DO97 292 aa13.74□□□□□ -0.21
CCBE1-203ENST00000589116 CLK2P49760 499 aaKnown RBP13.74□□□□□ -0.21
CCBE1-203ENST00000589116 USP14P54578 494 aa13.74□□□□□ -0.21
CCBE1-203ENST00000589116 PTGDRQ13258 359 aa13.74□□□□□ -0.21
CCBE1-203ENST00000589116 ZNF174Q15697 407 aa13.74□□□□□ -0.21
CCBE1-203ENST00000589116 INF2Q27J81 1249 aa13.74□□□□□ -0.21
CCBE1-203ENST00000589116 NOL9Q5SY16 702 aaKnown RBP13.74□□□□□ -0.21
CCBE1-203ENST00000589116 NEK8Q86SG6 692 aa13.74□□□□□ -0.21
CCBE1-203ENST00000589116 SULF1Q8IWU6 871 aa13.74□□□□□ -0.21
CCBE1-203ENST00000589116 ZC3H15Q8WU90 426 aaKnown RBP13.74□□□□□ -0.21
CCBE1-203ENST00000589116 FUCA2Q9BTY2 467 aa13.74□□□□□ -0.21
CCBE1-203ENST00000589116 WDR18Q9BV38 432 aa13.74□□□□□ -0.21
CCBE1-203ENST00000589116 GLIS2Q9BZE0 524 aaPredicted RBP13.74□□□□□ -0.21
CCBE1-203ENST00000589116 TAF1DQ9H5J8 278 aaPredicted RBP13.74□□□□□ -0.21
CCBE1-203ENST00000589116 PICK1Q9NRD5 415 aa13.74□□□□□ -0.21
CCBE1-203ENST00000589116 FAM13BQ9NYF5 915 aa13.74□□□□□ -0.21
CCBE1-203ENST00000589116 ZNF202O95125 648 aa13.73□□□□□ -0.21
CCBE1-203ENST00000589116 MCM7P33993 719 aa13.73□□□□□ -0.21
CCBE1-203ENST00000589116 SYKP43405 635 aa13.73□□□□□ -0.21
CCBE1-203ENST00000589116 GRM1Q13255 1194 aa13.73□□□□□ -0.21
CCBE1-203ENST00000589116 CAMK4Q16566 473 aa13.73□□□□□ -0.21
CCBE1-203ENST00000589116 CLIC6Q96NY7 704 aa13.73□□□□□ -0.21
CCBE1-203ENST00000589116 MCOLN1Q9GZU1 580 aa13.73□□□□□ -0.21
CCBE1-203ENST00000589116 RANBP17Q9H2T7 1088 aaKnown RBP13.73□□□□□ -0.21
CCBE1-203ENST00000589116 PSTPIP2Q9H939 334 aa13.73□□□□□ -0.21
CCBE1-203ENST00000589116 BIN2Q9UBW5 565 aaPredicted RBP13.73□□□□□ -0.21
CCBE1-203ENST00000589116 PHIPQ8WWQ0 1821 aa13.73□□□□□ -0.21
CCBE1-203ENST00000589116 PAPPA2Q9BXP8 1791 aa13.73□□□□□ -0.21
CCBE1-203ENST00000589116 PRPHP41219 470 aa13.72□□□□□ -0.21
CCBE1-203ENST00000589116 ZYXQ15942 572 aaKnown RBP13.72□□□□□ -0.21
CCBE1-203ENST00000589116 JAKMIP3Q5VZ66 844 aa13.72□□□□□ -0.21
CCBE1-203ENST00000589116 CCDC84Q86UT8 332 aaPredicted RBP13.72□□□□□ -0.21
CCBE1-203ENST00000589116 PTPRAP18433 802 aa13.72□□□□□ -0.21
CCBE1-203ENST00000589116 AP3B2Q13367 1082 aa13.72□□□□□ -0.21
CCBE1-203ENST00000589116 ELOA2Q8IYF1 753 aaPredicted RBP13.72□□□□□ -0.21
CCBE1-203ENST00000589116 TBCKQ8TEA7 893 aa13.72□□□□□ -0.21
CCBE1-203ENST00000589116 CSRNP2Q9H175 543 aa13.72□□□□□ -0.21
CCBE1-203ENST00000589116 TSKSQ9UJT2 592 aa13.72□□□□□ -0.21
CCBE1-203ENST00000589116 KCNH3Q9ULD8 1083 aa13.72□□□□□ -0.21
CCBE1-203ENST00000589116 EPHX2P34913 555 aa13.71□□□□□ -0.21
CCBE1-203ENST00000589116 GRIN1Q05586 938 aa13.71□□□□□ -0.21
CCBE1-203ENST00000589116 PRAMEF18Q5VWM3 479 aa13.71□□□□□ -0.21
CCBE1-203ENST00000589116 C4orf32Q8N8J7 132 aa13.71□□□□□ -0.21
CCBE1-203ENST00000589116 ZNF280CQ8ND82 737 aa13.71□□□□□ -0.21
CCBE1-203ENST00000589116 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.71□□□□□ -0.21
CCBE1-203ENST00000589116 C12orf42Q96LP6 360 aa13.71□□□□□ -0.21
CCBE1-203ENST00000589116 NAP1L4Q99733 375 aaKnown RBP13.71□□□□□ -0.21
CCBE1-203ENST00000589116 SDF4Q9BRK5 362 aa13.71□□□□□ -0.21
CCBE1-203ENST00000589116 TMEM260Q9NX78 707 aa13.71□□□□□ -0.21
CCBE1-203ENST00000589116 C19orf81C9J6K1 198 aa13.7□□□□□ -0.22
CCBE1-203ENST00000589116 LONP1P36776 959 aaKnown RBP13.7□□□□□ -0.22
CCBE1-203ENST00000589116 BACE1P56817 501 aa13.7□□□□□ -0.22
CCBE1-203ENST00000589116 MTMR2Q13614 643 aa13.7□□□□□ -0.22
CCBE1-203ENST00000589116 LETM2Q2VYF4 491 aa13.7□□□□□ -0.22
CCBE1-203ENST00000589116 SASS6Q6UVJ0 657 aa13.7□□□□□ -0.22
CCBE1-203ENST00000589116 CKAP2LQ8IYA6 745 aa13.7□□□□□ -0.22
CCBE1-203ENST00000589116 PRPF38AQ8NAV1 312 aaKnown RBP13.7□□□□□ -0.22
CCBE1-203ENST00000589116 ZKSCAN4Q969J2 545 aaPredicted RBP13.7□□□□□ -0.22
CCBE1-203ENST00000589116 KIFC2Q96AC6 838 aa13.7□□□□□ -0.22
CCBE1-203ENST00000589116 CAPNS2Q96L46 248 aa13.7□□□□□ -0.22
CCBE1-203ENST00000589116 PYM1Q9BRP8 204 aaKnown RBP13.7□□□□□ -0.22
CCBE1-203ENST00000589116 RBSNQ9H1K0 784 aa13.7□□□□□ -0.22
CCBE1-203ENST00000589116 MRVI1Q9Y6F6 885 aa13.7□□□□□ -0.22
CCBE1-203ENST00000589116 OTOFQ9HC10 1997 aa13.7□□□□□ -0.22
CCBE1-203ENST00000589116 PDE4DIPQ5VU43 2346 aa13.7□□□□□ -0.22
CCBE1-203ENST00000589116 PARP14Q460N5 1801 aa13.7□□□□□ -0.22
CCBE1-203ENST00000589116 VWA3AA6NCI4 1184 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 PPP1R12BO60237 982 aaPredicted RBP13.69□□□□□ -0.22
CCBE1-203ENST00000589116 NEMFO60524 1076 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 CCNT1O60563 726 aaKnown RBP13.69□□□□□ -0.22
CCBE1-203ENST00000589116 CAVIN2O95810 425 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 FOSP01100 380 aaPredicted RBP13.69□□□□□ -0.22
CCBE1-203ENST00000589116 FDX1P10109 184 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 XRCC6P12956 609 aaKnown RBP eCLIP13.69□□□□□ -0.22
CCBE1-203ENST00000589116 GCFC2P16383 781 aaKnown RBP13.69□□□□□ -0.22
CCBE1-203ENST00000589116 VCAM1P19320 739 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 TYRO3Q06418 890 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 SPP2Q13103 211 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 UBE2SQ16763 222 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 USH1GQ495M9 461 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 KRT26Q7Z3Y9 468 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 CCDC34Q96HJ3 373 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 SLF1Q9BQI6 1058 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms