RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 GRM1Q13255 1194 aa16.62■□□□□ 0.25
NPC1-207ENST00000588867 HOMER2Q9NSB8 354 aa16.62■□□□□ 0.25
NPC1-207ENST00000588867 PCDHA6Q9UN73 950 aa16.62■□□□□ 0.25
NPC1-207ENST00000588867 MRPL11Q9Y3B7 192 aaKnown RBP16.62■□□□□ 0.25
NPC1-207ENST00000588867 PCDHA8Q9Y5H6 950 aa16.62■□□□□ 0.25
NPC1-207ENST00000588867 ABCB11O95342 1321 aa16.62■□□□□ 0.25
NPC1-207ENST00000588867 BTBD19C9JJ37 291 aa16.62■□□□□ 0.25
NPC1-207ENST00000588867 PDHXO00330 501 aa16.62■□□□□ 0.25
NPC1-207ENST00000588867 CEBPZQ03701 1054 aaKnown RBP16.62■□□□□ 0.25
NPC1-207ENST00000588867 UBE2SQ16763 222 aa16.62■□□□□ 0.25
NPC1-207ENST00000588867 NOM1Q5C9Z4 860 aaKnown RBP16.62■□□□□ 0.25
NPC1-207ENST00000588867 MYSM1Q5VVJ2 828 aa16.62■□□□□ 0.25
NPC1-207ENST00000588867 JAKMIP3Q5VZ66 844 aa16.62■□□□□ 0.25
NPC1-207ENST00000588867 PIK3AP1Q6ZUJ8 805 aa16.62■□□□□ 0.25
NPC1-207ENST00000588867 REXO1Q8N1G1 1221 aaKnown RBP16.62■□□□□ 0.25
NPC1-207ENST00000588867 TMEM260Q9NX78 707 aa16.62■□□□□ 0.25
NPC1-207ENST00000588867 CNPY2Q9Y2B0 182 aa16.62■□□□□ 0.25
NPC1-207ENST00000588867 TCHHQ07283 1943 aa16.61■□□□□ 0.25
NPC1-207ENST00000588867 COL11A1P12107 1806 aaPredicted RBP16.61■□□□□ 0.25
NPC1-207ENST00000588867 CCDC194A0A1B0GVG4 234 aa16.61■□□□□ 0.25
NPC1-207ENST00000588867 FAM205CA6NFA0 338 aa16.61■□□□□ 0.25
NPC1-207ENST00000588867 ATP2B1P20020 1258 aa16.61■□□□□ 0.25
NPC1-207ENST00000588867 HERVK_113P62684 666 aa16.61■□□□□ 0.25
NPC1-207ENST00000588867 TMEM132BQ14DG7 1078 aa16.61■□□□□ 0.25
NPC1-207ENST00000588867 EARS2Q5JPH6 523 aaKnown RBP16.61■□□□□ 0.25
NPC1-207ENST00000588867 USP17L6PQ6QN14 398 aa16.61■□□□□ 0.25
NPC1-207ENST00000588867 REPS2Q8NFH8 660 aa16.61■□□□□ 0.25
NPC1-207ENST00000588867 TNFRSF25Q93038 417 aa16.61■□□□□ 0.25
NPC1-207ENST00000588867 CCDC102AQ96A19 550 aa16.61■□□□□ 0.25
NPC1-207ENST00000588867 ZNF396Q96N95 335 aaPredicted RBP16.61■□□□□ 0.25
NPC1-207ENST00000588867 M0R2N6 131 aa16.6■□□□□ 0.25
NPC1-207ENST00000588867 PEX10O60683 326 aa16.6■□□□□ 0.25
NPC1-207ENST00000588867 SLC10A3P09131 477 aa16.6■□□□□ 0.25
NPC1-207ENST00000588867 KRT85P78386 507 aa16.6■□□□□ 0.25
NPC1-207ENST00000588867 SNRNP48Q6IEG0 339 aaKnown RBP16.6■□□□□ 0.25
NPC1-207ENST00000588867 CLEC17AQ6ZS10 378 aa16.6■□□□□ 0.25
NPC1-207ENST00000588867 PAGR1Q9BTK6 254 aa16.6■□□□□ 0.25
NPC1-207ENST00000588867 GLT8D2Q9H1C3 349 aa16.6■□□□□ 0.25
NPC1-207ENST00000588867 PNMA3Q9UL41 463 aa16.6■□□□□ 0.25
NPC1-207ENST00000588867 PNMA2Q9UL42 364 aa16.6■□□□□ 0.25
NPC1-207ENST00000588867 CFBP00751 764 aa16.6■□□□□ 0.25
NPC1-207ENST00000588867 CYP2C8P10632 490 aa16.6■□□□□ 0.25
NPC1-207ENST00000588867 OAZ1P54368 228 aa16.6■□□□□ 0.25
NPC1-207ENST00000588867 ANKRD23Q86SG2 305 aa16.6■□□□□ 0.25
NPC1-207ENST00000588867 FAM43AQ8N2R8 423 aa16.6■□□□□ 0.25
NPC1-207ENST00000588867 PTPN18Q99952 460 aa16.6■□□□□ 0.25
NPC1-207ENST00000588867 GDPD2Q9HCC8 539 aa16.6■□□□□ 0.25
NPC1-207ENST00000588867 ZNF214Q9UL59 606 aaPredicted RBP16.6■□□□□ 0.25
NPC1-207ENST00000588867 MANSC4A6NHS7 340 aaPredicted RBP16.59■□□□□ 0.25
NPC1-207ENST00000588867 OPLAHO14841 1288 aa16.59■□□□□ 0.25
NPC1-207ENST00000588867 FIBPO43427 364 aa16.59■□□□□ 0.25
NPC1-207ENST00000588867 STAT3P40763 770 aa16.59■□□□□ 0.25
NPC1-207ENST00000588867 POTEEQ6S8J3 1075 aa16.59■□□□□ 0.25
NPC1-207ENST00000588867 LBX2Q6XYB7 198 aa16.59■□□□□ 0.25
NPC1-207ENST00000588867 MB21D1Q8N884 522 aa16.59■□□□□ 0.25
NPC1-207ENST00000588867 SMCR8Q8TEV9 937 aaPredicted RBP16.59■□□□□ 0.25
NPC1-207ENST00000588867 TBC1D5Q92609 795 aa16.59■□□□□ 0.25
NPC1-207ENST00000588867 PGBD1Q96JS3 809 aa16.59■□□□□ 0.25
NPC1-207ENST00000588867 TRERF1Q96PN7 1200 aa16.59■□□□□ 0.25
NPC1-207ENST00000588867 TEX13BQ9BXU2 312 aa16.59■□□□□ 0.25
NPC1-207ENST00000588867 FTOQ9C0B1 505 aaKnown RBP eCLIP16.59■□□□□ 0.25
NPC1-207ENST00000588867 BTBD7Q9P203 1132 aa16.59■□□□□ 0.25
NPC1-207ENST00000588867 CFAP45Q9UL16 551 aa16.59■□□□□ 0.25
NPC1-207ENST00000588867 RIPK3Q9Y572 518 aa16.59■□□□□ 0.25
NPC1-207ENST00000588867 MYH15Q9Y2K3 1946 aa16.59■□□□□ 0.25
NPC1-207ENST00000588867 MEIS2O14770 477 aa16.58■□□□□ 0.25
NPC1-207ENST00000588867 HOXA13P31271 388 aaPredicted RBP16.58■□□□□ 0.25
NPC1-207ENST00000588867 RILPL1Q5EBL4 403 aa16.58■□□□□ 0.25
NPC1-207ENST00000588867 MUM1L1Q5H9M0 696 aa16.58■□□□□ 0.25
NPC1-207ENST00000588867 KRT25Q7Z3Z0 450 aa16.58■□□□□ 0.25
NPC1-207ENST00000588867 HHIPL1Q96JK4 782 aa16.58■□□□□ 0.25
NPC1-207ENST00000588867 USP28Q96RU2 1077 aa16.58■□□□□ 0.25
NPC1-207ENST00000588867 NOL7Q9UMY1 257 aaKnown RBP16.58■□□□□ 0.25
NPC1-207ENST00000588867 FAM155AB1AL88 458 aaPredicted RBP16.58■□□□□ 0.24
NPC1-207ENST00000588867 ATP2A1O14983 1001 aa16.58■□□□□ 0.24
NPC1-207ENST00000588867 APLP1P51693 650 aa16.58■□□□□ 0.24
NPC1-207ENST00000588867 INF2Q27J81 1249 aa16.58■□□□□ 0.24
NPC1-207ENST00000588867 CYP4F22Q6NT55 531 aa16.58■□□□□ 0.24
NPC1-207ENST00000588867 RNF146Q9NTX7 359 aa16.58■□□□□ 0.24
NPC1-207ENST00000588867 SLC45A1Q9Y2W3 748 aa16.58■□□□□ 0.24
NPC1-207ENST00000588867 GOLGA6L22H0YM25 854 aa16.57■□□□□ 0.24
NPC1-207ENST00000588867 GCOM1H8Y6P7 765 aaPredicted RBP16.57■□□□□ 0.24
NPC1-207ENST00000588867 NFIBO00712 420 aa16.57■□□□□ 0.24
NPC1-207ENST00000588867 POLR2MP0CAP2 368 aa16.57■□□□□ 0.24
NPC1-207ENST00000588867 MCM4P33991 863 aa16.57■□□□□ 0.24
NPC1-207ENST00000588867 CLK2P49760 499 aaKnown RBP16.57■□□□□ 0.24
NPC1-207ENST00000588867 TOB1P50616 345 aaPredicted RBP16.57■□□□□ 0.24
NPC1-207ENST00000588867 NBR1Q14596 966 aa16.57■□□□□ 0.24
NPC1-207ENST00000588867 NONOQ15233 471 aaKnown RBP eCLIP16.57■□□□□ 0.24
NPC1-207ENST00000588867 CLEC4DQ8WXI8 215 aa16.57■□□□□ 0.24
NPC1-207ENST00000588867 CLIC4Q9Y696 253 aa16.57■□□□□ 0.24
NPC1-207ENST00000588867 TESPA1A2RU30 521 aaPredicted RBP16.57■□□□□ 0.24
NPC1-207ENST00000588867 NFKBIBQ15653 356 aa16.57■□□□□ 0.24
NPC1-207ENST00000588867 DEFB115Q30KQ5 88 aa16.57■□□□□ 0.24
NPC1-207ENST00000588867 ATL3Q6DD88 541 aa16.57■□□□□ 0.24
NPC1-207ENST00000588867 FCHSD1Q86WN1 690 aa16.57■□□□□ 0.24
NPC1-207ENST00000588867 MCF2L2Q86YR7 1114 aa16.57■□□□□ 0.24
NPC1-207ENST00000588867 CREBZFQ9NS37 354 aa16.57■□□□□ 0.24
NPC1-207ENST00000588867 RBPJLQ9UBG7 517 aa16.57■□□□□ 0.24
NPC1-207ENST00000588867 SPDYE3A6NKU9 549 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms