RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 TAF1LQ8IZX4 1826 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 PVALEFA0A1B0GWK0 134 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 SERPINB2P05120 415 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 CD44P16070 742 aaKnown RBP8.03□□□□□ -1.12
SPIDR-228ENST00000588781 GCFC2P16383 781 aaKnown RBP8.03□□□□□ -1.12
SPIDR-228ENST00000588781 NOVP48745 357 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 ADCY7P51828 1080 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 UBXN1Q04323 297 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 PDIA5Q14554 519 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 KARSQ15046 597 aaKnown RBP8.03□□□□□ -1.12
SPIDR-228ENST00000588781 BRD3Q15059 726 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 INF2Q27J81 1249 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 ERCC6LQ2NKX8 1250 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 KMT5BQ4FZB7 885 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 MFSD14BQ5SR56 506 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 GPATCH4Q5T3I0 446 aaKnown RBP8.03□□□□□ -1.12
SPIDR-228ENST00000588781 IQCEQ6IPM2 695 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 PRR5LQ6MZQ0 368 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 FBXO38Q6PIJ6 1188 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 ZNF662Q6ZS27 426 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 ARHGAP27Q6ZUM4 889 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 SV2BQ7L1I2 683 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 APTXQ7Z2E3 356 aaKnown RBP8.03□□□□□ -1.12
SPIDR-228ENST00000588781 TEX2Q8IWB9 1127 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 SP8Q8IXZ3 490 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 GIMAP8Q8ND71 665 aaPredicted RBP8.03□□□□□ -1.12
SPIDR-228ENST00000588781 DYNLL2Q96FJ2 89 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 RPGRIP1Q96KN7 1286 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 CCDC17Q96LX7 622 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 NAPGQ99747 312 aaPredicted RBP8.03□□□□□ -1.12
SPIDR-228ENST00000588781 TSG101Q99816 390 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 CARD6Q9BX69 1037 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 TSGA10Q9BZW7 698 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 BLZF1Q9H2G9 400 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 ACBD3Q9H3P7 528 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 HAUS4Q9H6D7 363 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 ABHD10Q9NUJ1 306 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 CDC23Q9UJX2 597 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 KDM3AQ9Y4C1 1321 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 USP17L3A6NCW0 530 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 USP17L4A6NCW7 530 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 G3V3G9 751 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 C6orf229H3BNL8 230 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 TEX33O43247 280 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 CCNT1O60563 726 aaKnown RBP8.02□□□□□ -1.13
SPIDR-228ENST00000588781 GYPCP04921 128 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 CASP14P31944 242 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 KRT9P35527 623 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 CCT6AP40227 531 aaKnown RBP8.02□□□□□ -1.13
SPIDR-228ENST00000588781 PRCPP42785 496 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 MTIF2P46199 727 aaKnown RBP8.02□□□□□ -1.13
SPIDR-228ENST00000588781 FXR2P51116 673 aaKnown RBP eCLIP8.02□□□□□ -1.13
SPIDR-228ENST00000588781 MRPL12P52815 198 aaKnown RBP8.02□□□□□ -1.13
SPIDR-228ENST00000588781 ASIC1P78348 528 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 CKAP4Q07065 602 aaKnown RBP8.02□□□□□ -1.13
SPIDR-228ENST00000588781 TRAF1Q13077 416 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 SLC15A2Q16348 729 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 GPR162Q16538 588 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 CALCRLQ16602 461 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 KIF4BQ2VIQ3 1234 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 LETM2Q2VYF4 491 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 HSP90AA4PQ58FG1 418 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 FIGNQ5HY92 759 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 DCAF8Q5TAQ9 597 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 TAF3Q5VWG9 929 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 TOGARAM2Q6ZUX3 1019 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 USP17L1Q7RTZ2 530 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 SRGAP1Q7Z6B7 1085 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 TXNRD3Q86VQ6 643 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 CCDC170Q8IYT3 715 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 STAG2Q8N3U4 1231 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 CSGALNACT2Q8N6G5 542 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 MB21D1Q8N884 522 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 P2RX5Q93086 422 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 MED15Q96RN5 788 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 ARID3AQ99856 593 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 VPS16Q9H269 839 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 RIOX1Q9H6W3 641 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 ARFGAP3Q9NP61 516 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 BMP2KQ9NSY1 1161 aaPredicted RBP8.02□□□□□ -1.13
SPIDR-228ENST00000588781 TAB2Q9NYJ8 693 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 SAP30BPQ9UHR5 308 aaKnown RBP8.02□□□□□ -1.13
SPIDR-228ENST00000588781 CAPN11Q9UMQ6 739 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 TAF1P21675 1872 aa8.02□□□□□ -1.13
SPIDR-228ENST00000588781 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.01□□□□□ -1.13
SPIDR-228ENST00000588781 PNMA6FA0A0J9YX94 578 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 A0A1W2PQJ5 194 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 WTIPA6NIX2 430 aaPredicted RBP8.01□□□□□ -1.13
SPIDR-228ENST00000588781 SOWAHDA6NJG2 315 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 SPDYE4A6NLX3 237 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 SMIM22K7EJ46 135 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 PES1O00541 588 aaKnown RBP8.01□□□□□ -1.13
SPIDR-228ENST00000588781 PPEF1O14829 653 aaPredicted RBP8.01□□□□□ -1.13
SPIDR-228ENST00000588781 KRT86O43790 486 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 MARCH6O60337 910 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 EIF3JO75822 258 aaKnown RBP8.01□□□□□ -1.13
SPIDR-228ENST00000588781 TTLL1O95922 423 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 PLCG1P19174 1290 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 ALDH1B1P30837 517 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 CHMP4BP1P59074 171 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms