RNA–Protein interactions for RNA: ENST00000588580.6

SUGP1-208, Transcript of SURP and G-patch domain containing 1, humanhuman

TSL 2

Gene SUGP1, Length 715 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-208ENST00000588580 SYDE2Q5VT97 1194 aa18.39■□□□□ 0.53
SUGP1-208ENST00000588580 TMTC3Q6ZXV5 915 aa18.39■□□□□ 0.53
SUGP1-208ENST00000588580 CCDC144CPQ8IYA2 1237 aa18.39■□□□□ 0.53
SUGP1-208ENST00000588580 PRPF38AQ8NAV1 312 aaKnown RBP18.39■□□□□ 0.53
SUGP1-208ENST00000588580 IL27Q8NEV9 243 aa18.39■□□□□ 0.53
SUGP1-208ENST00000588580 PRR12Q9ULL5 1215 aa18.39■□□□□ 0.53
SUGP1-208ENST00000588580 KLRF2D3W0D1 207 aa18.38■□□□□ 0.53
SUGP1-208ENST00000588580 VWA5AO00534 786 aa18.38■□□□□ 0.53
SUGP1-208ENST00000588580 CYTH3O43739 400 aa18.38■□□□□ 0.53
SUGP1-208ENST00000588580 CYP2B6P20813 491 aa18.38■□□□□ 0.53
SUGP1-208ENST00000588580 METAP2P50579 478 aaKnown RBP eCLIP18.38■□□□□ 0.53
SUGP1-208ENST00000588580 FUT2Q10981 343 aa18.38■□□□□ 0.53
SUGP1-208ENST00000588580 RTN1Q16799 776 aa18.38■□□□□ 0.53
SUGP1-208ENST00000588580 ZNF697Q5TEC3 545 aa18.38■□□□□ 0.53
SUGP1-208ENST00000588580 SYNE3Q6ZMZ3 975 aa18.38■□□□□ 0.53
SUGP1-208ENST00000588580 MAFAQ8NHW3 353 aaPredicted RBP18.38■□□□□ 0.53
SUGP1-208ENST00000588580 CTCFLQ8NI51 663 aaPredicted RBP18.38■□□□□ 0.53
SUGP1-208ENST00000588580 CHURC1Q8WUH1 139 aa18.38■□□□□ 0.53
SUGP1-208ENST00000588580 UBA5Q9GZZ9 404 aa18.38■□□□□ 0.53
SUGP1-208ENST00000588580 TXNRD2Q9NNW7 524 aa18.38■□□□□ 0.53
SUGP1-208ENST00000588580 HOXC10Q9NYD6 342 aa18.38■□□□□ 0.53
SUGP1-208ENST00000588580 RBPJLQ9UBG7 517 aa18.38■□□□□ 0.53
SUGP1-208ENST00000588580 MORF4L1Q9UBU8 362 aa18.38■□□□□ 0.53
SUGP1-208ENST00000588580 ISY1Q9ULR0 285 aaKnown RBP18.38■□□□□ 0.53
SUGP1-208ENST00000588580 PEX10O60683 326 aa18.37■□□□□ 0.53
SUGP1-208ENST00000588580 PFKFB2O60825 505 aa18.37■□□□□ 0.53
SUGP1-208ENST00000588580 PRKAR2AP13861 404 aaKnown RBP18.37■□□□□ 0.53
SUGP1-208ENST00000588580 KIF5BP33176 963 aa18.37■□□□□ 0.53
SUGP1-208ENST00000588580 GCLCP48506 637 aaPredicted RBP18.37■□□□□ 0.53
SUGP1-208ENST00000588580 ST3GAL1Q11201 340 aa18.37■□□□□ 0.53
SUGP1-208ENST00000588580 ME3Q16798 604 aa18.37■□□□□ 0.53
SUGP1-208ENST00000588580 SRBD1Q8N5C6 995 aaKnown RBP18.37■□□□□ 0.53
SUGP1-208ENST00000588580 GTF3C2Q8WUA4 911 aaPredicted RBP18.37■□□□□ 0.53
SUGP1-208ENST00000588580 KIFC2Q96AC6 838 aa18.37■□□□□ 0.53
SUGP1-208ENST00000588580 MTMR8Q96EF0 704 aa18.37■□□□□ 0.53
SUGP1-208ENST00000588580 RANBP17Q9H2T7 1088 aaKnown RBP18.37■□□□□ 0.53
SUGP1-208ENST00000588580 SEMA6BQ9H3T3 888 aa18.37■□□□□ 0.53
SUGP1-208ENST00000588580 RIOX1Q9H6W3 641 aa18.37■□□□□ 0.53
SUGP1-208ENST00000588580 SLC38A10Q9HBR0 1119 aa18.37■□□□□ 0.53
SUGP1-208ENST00000588580 NCOA5Q9HCD5 579 aaKnown RBP18.37■□□□□ 0.53
SUGP1-208ENST00000588580 RBM28Q9NW13 759 aaKnown RBP18.37■□□□□ 0.53
SUGP1-208ENST00000588580 BTBD7Q9P203 1132 aa18.37■□□□□ 0.53
SUGP1-208ENST00000588580 CNTNAP5Q8WYK1 1306 aa18.37■□□□□ 0.53
SUGP1-208ENST00000588580 PLXNB2O15031 1838 aa18.36■□□□□ 0.53
SUGP1-208ENST00000588580 ZNF536O15090 1300 aa18.36■□□□□ 0.53
SUGP1-208ENST00000588580 ST18O60284 1047 aa18.36■□□□□ 0.53
SUGP1-208ENST00000588580 COL9A1P20849 921 aa18.36■□□□□ 0.53
SUGP1-208ENST00000588580 IKQ13123 557 aaPredicted RBP18.36■□□□□ 0.53
SUGP1-208ENST00000588580 NTRK3Q16288 839 aa18.36■□□□□ 0.53
SUGP1-208ENST00000588580 LHX8Q68G74 356 aa18.36■□□□□ 0.53
SUGP1-208ENST00000588580 NOL8Q76FK4 1167 aaKnown RBP18.36■□□□□ 0.53
SUGP1-208ENST00000588580 ADGRF4Q8IZF3 695 aa18.36■□□□□ 0.53
SUGP1-208ENST00000588580 MB21D1Q8N884 522 aa18.36■□□□□ 0.53
SUGP1-208ENST00000588580 SPZ1Q9BXG8 430 aa18.36■□□□□ 0.53
SUGP1-208ENST00000588580 JMJD4Q9H9V9 463 aa18.36■□□□□ 0.53
SUGP1-208ENST00000588580 ZNF214Q9UL59 606 aaPredicted RBP18.36■□□□□ 0.53
SUGP1-208ENST00000588580 NAP1L2Q9ULW6 460 aaPredicted RBP18.36■□□□□ 0.53
SUGP1-208ENST00000588580 RABGAP1Q9Y3P9 1069 aa18.36■□□□□ 0.53
SUGP1-208ENST00000588580 ATP2A1O14983 1001 aa18.35■□□□□ 0.53
SUGP1-208ENST00000588580 SMARCA1P28370 1054 aa18.35■□□□□ 0.53
SUGP1-208ENST00000588580 ADD1P35611 737 aaKnown RBP18.35■□□□□ 0.53
SUGP1-208ENST00000588580 GNAQP50148 359 aa18.35■□□□□ 0.53
SUGP1-208ENST00000588580 CACNB2Q08289 660 aaPredicted RBP18.35■□□□□ 0.53
SUGP1-208ENST00000588580 TMEM132BQ14DG7 1078 aa18.35■□□□□ 0.53
SUGP1-208ENST00000588580 PPP2R5BQ15173 497 aa18.35■□□□□ 0.53
SUGP1-208ENST00000588580 LBHD1Q9BQE6 289 aaPredicted RBP18.35■□□□□ 0.53
SUGP1-208ENST00000588580 LZTS2Q9BRK4 669 aa18.35■□□□□ 0.53
SUGP1-208ENST00000588580 LIMCH1Q9UPQ0 1083 aa18.35■□□□□ 0.53
SUGP1-208ENST00000588580 ZNF236Q9UL36 1845 aa18.35■□□□□ 0.53
SUGP1-208ENST00000588580 TTC28Q96AY4 2481 aa18.34■□□□□ 0.53
SUGP1-208ENST00000588580 LCTP09848 1927 aa18.34■□□□□ 0.53
SUGP1-208ENST00000588580 FDX1P10109 184 aa18.34■□□□□ 0.53
SUGP1-208ENST00000588580 SNAP25P60880 206 aa18.34■□□□□ 0.53
SUGP1-208ENST00000588580 ERVK-9P63128 1117 aa18.34■□□□□ 0.53
SUGP1-208ENST00000588580 ERVK-24P63145 666 aa18.34■□□□□ 0.53
SUGP1-208ENST00000588580 CCT2P78371 535 aaKnown RBP18.34■□□□□ 0.53
SUGP1-208ENST00000588580 SCRN1Q12765 414 aa18.34■□□□□ 0.53
SUGP1-208ENST00000588580 STK3Q13188 491 aa18.34■□□□□ 0.53
SUGP1-208ENST00000588580 SAMD1Q6SPF0 538 aaPredicted RBP18.34■□□□□ 0.53
SUGP1-208ENST00000588580 CMTR1Q8N1G2 835 aaKnown RBP18.34■□□□□ 0.53
SUGP1-208ENST00000588580 GTF3C6Q969F1 213 aa18.34■□□□□ 0.53
SUGP1-208ENST00000588580 PAGR1Q9BTK6 254 aa18.34■□□□□ 0.53
SUGP1-208ENST00000588580 CCND3P30281 292 aaPredicted RBP18.33■□□□□ 0.52
SUGP1-208ENST00000588580 CDC37Q16543 378 aaPredicted RBP18.33■□□□□ 0.52
SUGP1-208ENST00000588580 SPATC1LQ9H0A9 340 aa18.33■□□□□ 0.52
SUGP1-208ENST00000588580 ZNFX1Q9P2E3 1918 aaKnown RBP18.33■□□□□ 0.52
SUGP1-208ENST00000588580 CCDC196A0A1B0GTZ2 297 aa18.32■□□□□ 0.52
SUGP1-208ENST00000588580 PPP1R11O60927 126 aaPredicted RBP18.32■□□□□ 0.52
SUGP1-208ENST00000588580 ZBED4O75132 1171 aa18.32■□□□□ 0.52
SUGP1-208ENST00000588580 XRCC5P13010 732 aaKnown RBP18.32■□□□□ 0.52
SUGP1-208ENST00000588580 TAL1P17542 331 aaPredicted RBP18.32■□□□□ 0.52
SUGP1-208ENST00000588580 OAZ1P54368 228 aa18.32■□□□□ 0.52
SUGP1-208ENST00000588580 QRICH1Q2TAL8 776 aa18.32■□□□□ 0.52
SUGP1-208ENST00000588580 Q3C1V9 767 aa18.32■□□□□ 0.52
SUGP1-208ENST00000588580 NECAB1Q8N987 351 aa18.32■□□□□ 0.52
SUGP1-208ENST00000588580 MYLIPQ8WY64 445 aa18.32■□□□□ 0.52
SUGP1-208ENST00000588580 SYMPKQ92797 1274 aaKnown RBP18.32■□□□□ 0.52
SUGP1-208ENST00000588580 PIGSQ96S52 555 aa18.32■□□□□ 0.52
SUGP1-208ENST00000588580 NUDT12Q9BQG2 462 aa18.32■□□□□ 0.52
SUGP1-208ENST00000588580 SLKQ9H2G2 1235 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms