RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-223	ENST00000588516	ZNF277	Q9NRM2	450 aa	Predicted RBP	15.8	■□□□□ 0.12
NEDD4L-223	ENST00000588516	CTNND2	Q9UQB3	1225 aa		15.8	■□□□□ 0.12
NEDD4L-223	ENST00000588516	MRFAP1	Q9Y605	127 aa		15.8	■□□□□ 0.12
NEDD4L-223	ENST00000588516		A0A1W2PQC6	194 aa		15.79	■□□□□ 0.12
NEDD4L-223	ENST00000588516	PSMA7	O14818	248 aa		15.79	■□□□□ 0.12
NEDD4L-223	ENST00000588516	MCM7	P33993	719 aa		15.79	■□□□□ 0.12
NEDD4L-223	ENST00000588516	PPP2R3A	Q06190	1150 aa		15.79	■□□□□ 0.12
NEDD4L-223	ENST00000588516	RBL2	Q08999	1139 aa		15.79	■□□□□ 0.12
NEDD4L-223	ENST00000588516	APTX	Q7Z2E3	356 aa	Known RBP	15.79	■□□□□ 0.12
NEDD4L-223	ENST00000588516	RETREG2	Q8NC44	543 aa		15.79	■□□□□ 0.12
NEDD4L-223	ENST00000588516	NELFB	Q8WX92	580 aa		15.79	■□□□□ 0.12
NEDD4L-223	ENST00000588516	MASTL	Q96GX5	879 aa		15.79	■□□□□ 0.12
NEDD4L-223	ENST00000588516	DHTKD1	Q96HY7	919 aa	Predicted RBP	15.79	■□□□□ 0.12
NEDD4L-223	ENST00000588516	CARD6	Q9BX69	1037 aa		15.79	■□□□□ 0.12
NEDD4L-223	ENST00000588516	SPZ1	Q9BXG8	430 aa		15.79	■□□□□ 0.12
NEDD4L-223	ENST00000588516	LRRC27	Q9C0I9	530 aa		15.79	■□□□□ 0.12
NEDD4L-223	ENST00000588516	C6orf50	Q9HD87	102 aa		15.79	■□□□□ 0.12
NEDD4L-223	ENST00000588516	ADGRG1	Q9Y653	693 aa		15.79	■□□□□ 0.12
NEDD4L-223	ENST00000588516	XDH	P47989	1333 aa		15.79	■□□□□ 0.12
NEDD4L-223	ENST00000588516		A0A087X0B3	334 aa		15.78	■□□□□ 0.12
NEDD4L-223	ENST00000588516	AOC2	O75106	756 aa		15.78	■□□□□ 0.12
NEDD4L-223	ENST00000588516	COPB1	P53618	953 aa	Known RBP	15.78	■□□□□ 0.12
NEDD4L-223	ENST00000588516	ST5	P78524	1137 aa		15.78	■□□□□ 0.12
NEDD4L-223	ENST00000588516	GPS2	Q13227	327 aa		15.78	■□□□□ 0.12
NEDD4L-223	ENST00000588516	GRAP	Q13588	217 aa		15.78	■□□□□ 0.12
NEDD4L-223	ENST00000588516	NAA30	Q147X3	362 aa	Predicted RBP	15.78	■□□□□ 0.12
NEDD4L-223	ENST00000588516	BRD3	Q15059	726 aa		15.78	■□□□□ 0.12
NEDD4L-223	ENST00000588516	TCP11X2	Q5H9J9	407 aa		15.78	■□□□□ 0.12
NEDD4L-223	ENST00000588516	FAM47A	Q5JRC9	791 aa		15.78	■□□□□ 0.12
NEDD4L-223	ENST00000588516	RCSD1	Q6JBY9	416 aa		15.78	■□□□□ 0.12
NEDD4L-223	ENST00000588516	C3orf67	Q6ZVT6	689 aa		15.78	■□□□□ 0.12
NEDD4L-223	ENST00000588516	CNBD1	Q8NA66	436 aa		15.78	■□□□□ 0.12
NEDD4L-223	ENST00000588516	EHBP1	Q8NDI1	1231 aa		15.78	■□□□□ 0.12
NEDD4L-223	ENST00000588516	GRAPL	Q8TC17	118 aa	Predicted RBP	15.78	■□□□□ 0.12
NEDD4L-223	ENST00000588516	ZNF384	Q8TF68	577 aa		15.78	■□□□□ 0.12
NEDD4L-223	ENST00000588516	GBP3	Q9H0R5	595 aa		15.78	■□□□□ 0.12
NEDD4L-223	ENST00000588516	DISC1	Q9NRI5	854 aa		15.78	■□□□□ 0.12
NEDD4L-223	ENST00000588516	BARHL2	Q9NY43	387 aa		15.78	■□□□□ 0.12
NEDD4L-223	ENST00000588516	ANKIB1	Q9P2G1	1089 aa		15.78	■□□□□ 0.12
NEDD4L-223	ENST00000588516	SLX4	Q8IY92	1834 aa		15.78	■□□□□ 0.12
NEDD4L-223	ENST00000588516	ANKRD31	Q8N7Z5	1873 aa		15.78	■□□□□ 0.12
NEDD4L-223	ENST00000588516	CTAGE9	A4FU28	777 aa		15.77	■□□□□ 0.12
NEDD4L-223	ENST00000588516	FAM205C	A6NFA0	338 aa		15.77	■□□□□ 0.12
NEDD4L-223	ENST00000588516	KCNJ18	B7U540	433 aa		15.77	■□□□□ 0.12
NEDD4L-223	ENST00000588516	CA12	O43570	354 aa		15.77	■□□□□ 0.12
NEDD4L-223	ENST00000588516	ERLIN1	O75477	346 aa		15.77	■□□□□ 0.12
NEDD4L-223	ENST00000588516	FGFR1OP	O95684	399 aa	Known RBP	15.77	■□□□□ 0.12
NEDD4L-223	ENST00000588516	SRGN	P10124	158 aa		15.77	■□□□□ 0.12
NEDD4L-223	ENST00000588516	ATP2B4	P23634	1241 aa		15.77	■□□□□ 0.12
NEDD4L-223	ENST00000588516	MAP2K2	P36507	400 aa		15.77	■□□□□ 0.12
NEDD4L-223	ENST00000588516	KCNJ12	Q14500	433 aa		15.77	■□□□□ 0.12
NEDD4L-223	ENST00000588516	EARS2	Q5JPH6	523 aa	Known RBP	15.77	■□□□□ 0.12
NEDD4L-223	ENST00000588516	TOGARAM2	Q6ZUX3	1019 aa		15.77	■□□□□ 0.12
NEDD4L-223	ENST00000588516	C4orf32	Q8N8J7	132 aa		15.77	■□□□□ 0.12
NEDD4L-223	ENST00000588516	TBC1D22A	Q8WUA7	517 aa		15.77	■□□□□ 0.12
NEDD4L-223	ENST00000588516	CNKSR2	Q8WXI2	1034 aa		15.77	■□□□□ 0.12
NEDD4L-223	ENST00000588516	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	15.77	■□□□□ 0.12
NEDD4L-223	ENST00000588516		V9GYY5	206 aa	Predicted RBP	15.77	■□□□□ 0.12
NEDD4L-223	ENST00000588516	PALM3	A6NDB9	673 aa	Predicted RBP	15.76	■□□□□ 0.11
NEDD4L-223	ENST00000588516	CD44	P16070	742 aa	Known RBP	15.76	■□□□□ 0.11
NEDD4L-223	ENST00000588516	MCM3	P25205	808 aa		15.76	■□□□□ 0.11
NEDD4L-223	ENST00000588516	CLCN6	P51797	869 aa		15.76	■□□□□ 0.11
NEDD4L-223	ENST00000588516	STX17	P56962	302 aa		15.76	■□□□□ 0.11
NEDD4L-223	ENST00000588516	KRT31	Q15323	416 aa		15.76	■□□□□ 0.11
NEDD4L-223	ENST00000588516	WHAMMP3	Q1A5X7	153 aa		15.76	■□□□□ 0.11
NEDD4L-223	ENST00000588516	ZNF771	Q7L3S4	317 aa	Predicted RBP	15.76	■□□□□ 0.11
NEDD4L-223	ENST00000588516	TMC4	Q7Z404	712 aa		15.76	■□□□□ 0.11
NEDD4L-223	ENST00000588516	SRGAP1	Q7Z6B7	1085 aa		15.76	■□□□□ 0.11
NEDD4L-223	ENST00000588516	ADSSL1	Q8N142	457 aa		15.76	■□□□□ 0.11
NEDD4L-223	ENST00000588516	SHISA4	Q96DD7	197 aa		15.76	■□□□□ 0.11
NEDD4L-223	ENST00000588516	RRP36	Q96EU6	259 aa	Known RBP	15.76	■□□□□ 0.11
NEDD4L-223	ENST00000588516	MED15	Q96RN5	788 aa		15.76	■□□□□ 0.11
NEDD4L-223	ENST00000588516	NUP88	Q99567	741 aa	Predicted RBP	15.76	■□□□□ 0.11
NEDD4L-223	ENST00000588516	ARFGAP3	Q9NP61	516 aa		15.76	■□□□□ 0.11
NEDD4L-223	ENST00000588516	ZNHIT6	Q9NWK9	470 aa	Known RBP	15.76	■□□□□ 0.11
NEDD4L-223	ENST00000588516	SEC63	Q9UGP8	760 aa	Known RBP	15.76	■□□□□ 0.11
NEDD4L-223	ENST00000588516	CDC23	Q9UJX2	597 aa		15.76	■□□□□ 0.11
NEDD4L-223	ENST00000588516	COL11A2	P13942	1736 aa	Predicted RBP	15.76	■□□□□ 0.11
NEDD4L-223	ENST00000588516	CASP8AP2	Q9UKL3	1982 aa		15.76	■□□□□ 0.11
NEDD4L-223	ENST00000588516	NAV1	Q8NEY1	1877 aa		15.76	■□□□□ 0.11
NEDD4L-223	ENST00000588516	ADAMTSL1	Q8N6G6	1762 aa		15.75	■□□□□ 0.11
NEDD4L-223	ENST00000588516	hCG_1642624	A0A1W2PR95	340 aa		15.75	■□□□□ 0.11
NEDD4L-223	ENST00000588516	CCDC66	A2RUB6	948 aa		15.75	■□□□□ 0.11
NEDD4L-223	ENST00000588516	TEX33	O43247	280 aa		15.75	■□□□□ 0.11
NEDD4L-223	ENST00000588516	RHOBTB3	O94955	611 aa		15.75	■□□□□ 0.11
NEDD4L-223	ENST00000588516	PRDX5	P30044	214 aa		15.75	■□□□□ 0.11
NEDD4L-223	ENST00000588516	DNM2	P50570	870 aa		15.75	■□□□□ 0.11
NEDD4L-223	ENST00000588516	KRT83	P78385	493 aa		15.75	■□□□□ 0.11
NEDD4L-223	ENST00000588516	NONO	Q15233	471 aa	Known RBP eCLIP	15.75	■□□□□ 0.11
NEDD4L-223	ENST00000588516	COBLL1	Q53SF7	1204 aa		15.75	■□□□□ 0.11
NEDD4L-223	ENST00000588516	HSP90AA4P	Q58FG1	418 aa		15.75	■□□□□ 0.11
NEDD4L-223	ENST00000588516	RSRC2	Q7L4I2	434 aa	Known RBP	15.75	■□□□□ 0.11
NEDD4L-223	ENST00000588516	OR8K1	Q8NGG5	319 aa		15.75	■□□□□ 0.11
NEDD4L-223	ENST00000588516	KIFC2	Q96AC6	838 aa		15.75	■□□□□ 0.11
NEDD4L-223	ENST00000588516	RAB34	Q9BZG1	259 aa		15.75	■□□□□ 0.11
NEDD4L-223	ENST00000588516	ESYT2	A0FGR8	921 aa		15.74	■□□□□ 0.11
NEDD4L-223	ENST00000588516		M0R2N6	131 aa		15.74	■□□□□ 0.11
NEDD4L-223	ENST00000588516	IPO7	O95373	1038 aa	Known RBP	15.74	■□□□□ 0.11
NEDD4L-223	ENST00000588516	PARP1	P09874	1014 aa	Known RBP	15.74	■□□□□ 0.11
NEDD4L-223	ENST00000588516	USP17L8	P0C7I0	530 aa		15.74	■□□□□ 0.11

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms