RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 PSRC1Q6PGN9 363 aaPredicted RBP16.66■□□□□ 0.26
DNMT1-213ENST00000587604 CXCL17Q6UXB2 119 aa16.66■□□□□ 0.26
DNMT1-213ENST00000587604 ZNF365Q70YC5 407 aa16.66■□□□□ 0.26
DNMT1-213ENST00000587604 KCTD1Q719H9 257 aa16.66■□□□□ 0.26
DNMT1-213ENST00000587604 SLC43A3Q8NBI5 491 aa16.66■□□□□ 0.26
DNMT1-213ENST00000587604 CHMP4CQ96CF2 233 aa16.66■□□□□ 0.26
DNMT1-213ENST00000587604 SEZ6LQ9BYH1 1024 aa16.66■□□□□ 0.26
DNMT1-213ENST00000587604 IL17RBQ9NRM6 502 aa16.66■□□□□ 0.26
DNMT1-213ENST00000587604 PRR12Q9ULL5 1215 aa16.66■□□□□ 0.26
DNMT1-213ENST00000587604 NCOR1O75376 2440 aa16.66■□□□□ 0.26
DNMT1-213ENST00000587604 FSCN1Q16658 493 aaKnown RBP16.65■□□□□ 0.26
DNMT1-213ENST00000587604 IQSEC1Q6DN90 963 aa16.65■□□□□ 0.26
DNMT1-213ENST00000587604 TLK2Q86UE8 772 aa16.65■□□□□ 0.26
DNMT1-213ENST00000587604 OTUD7AQ8TE49 926 aaPredicted RBP16.65■□□□□ 0.26
DNMT1-213ENST00000587604 SYMPKQ92797 1274 aaKnown RBP16.65■□□□□ 0.26
DNMT1-213ENST00000587604 PBX4Q9BYU1 374 aa16.65■□□□□ 0.26
DNMT1-213ENST00000587604 PPP1R12CQ9BZL4 782 aa16.65■□□□□ 0.26
DNMT1-213ENST00000587604 AP5M1Q9H0R1 490 aa16.65■□□□□ 0.26
DNMT1-213ENST00000587604 INCENPQ9NQS7 918 aa16.65■□□□□ 0.26
DNMT1-213ENST00000587604 CYP39A1Q9NYL5 469 aa16.65■□□□□ 0.26
DNMT1-213ENST00000587604 Q9Y3F1 56 aa16.65■□□□□ 0.26
DNMT1-213ENST00000587604 PCDHB15Q9Y5E8 787 aa16.65■□□□□ 0.26
DNMT1-213ENST00000587604 GRXCR1A8MXD5 290 aa16.64■□□□□ 0.25
DNMT1-213ENST00000587604 FOXP2O15409 715 aa16.64■□□□□ 0.25
DNMT1-213ENST00000587604 DYNC1LI2O43237 492 aaPredicted RBP16.64■□□□□ 0.25
DNMT1-213ENST00000587604 ZEB2O60315 1214 aa16.64■□□□□ 0.25
DNMT1-213ENST00000587604 ACRP10323 421 aa16.64■□□□□ 0.25
DNMT1-213ENST00000587604 SMPD1P17405 629 aa16.64■□□□□ 0.25
DNMT1-213ENST00000587604 MX1P20591 662 aa16.64■□□□□ 0.25
DNMT1-213ENST00000587604 CYP2C18P33260 490 aa16.64■□□□□ 0.25
DNMT1-213ENST00000587604 NOVP48745 357 aa16.64■□□□□ 0.25
DNMT1-213ENST00000587604 CTDSPL2Q05D32 466 aa16.64■□□□□ 0.25
DNMT1-213ENST00000587604 ITGA7Q13683 1181 aa16.64■□□□□ 0.25
DNMT1-213ENST00000587604 MUM1L1Q5H9M0 696 aa16.64■□□□□ 0.25
DNMT1-213ENST00000587604 TAPT1Q6NXT6 567 aa16.64■□□□□ 0.25
DNMT1-213ENST00000587604 IL23AQ9NPF7 189 aa16.64■□□□□ 0.25
DNMT1-213ENST00000587604 ANAPC4Q9UJX5 808 aa16.64■□□□□ 0.25
DNMT1-213ENST00000587604 RANBP6O60518 1105 aaKnown RBP16.63■□□□□ 0.25
DNMT1-213ENST00000587604 NMT2O60551 498 aa16.63■□□□□ 0.25
DNMT1-213ENST00000587604 PBX2P40425 430 aa16.63■□□□□ 0.25
DNMT1-213ENST00000587604 SNAP25P60880 206 aa16.63■□□□□ 0.25
DNMT1-213ENST00000587604 HERVK_113Q902F9 699 aa16.63■□□□□ 0.25
DNMT1-213ENST00000587604 HIPK3Q9H422 1215 aa16.63■□□□□ 0.25
DNMT1-213ENST00000587604 PDGFCQ9NRA1 345 aa16.63■□□□□ 0.25
DNMT1-213ENST00000587604 CCPG1Q9ULG6 757 aa16.63■□□□□ 0.25
DNMT1-213ENST00000587604 ORC4O43929 436 aa16.62■□□□□ 0.25
DNMT1-213ENST00000587604 FGBP02675 491 aa16.62■□□□□ 0.25
DNMT1-213ENST00000587604 ICAM1P05362 532 aa16.62■□□□□ 0.25
DNMT1-213ENST00000587604 EEPD1Q7L9B9 569 aa16.62■□□□□ 0.25
DNMT1-213ENST00000587604 USP38Q8NB14 1042 aa16.62■□□□□ 0.25
DNMT1-213ENST00000587604 MORC4Q8TE76 937 aa16.62■□□□□ 0.25
DNMT1-213ENST00000587604 DCAF4Q8WV16 495 aa16.62■□□□□ 0.25
DNMT1-213ENST00000587604 MTIF3Q9H2K0 278 aaKnown RBP16.62■□□□□ 0.25
DNMT1-213ENST00000587604 VTA1Q9NP79 307 aa16.62■□□□□ 0.25
DNMT1-213ENST00000587604 DDX49Q9Y6V7 483 aaKnown RBP16.62■□□□□ 0.25
DNMT1-213ENST00000587604 GRIN2DO15399 1336 aa16.62■□□□□ 0.25
DNMT1-213ENST00000587604 LCTP09848 1927 aa16.62■□□□□ 0.25
DNMT1-213ENST00000587604 MUC3AQ02505 3323 aa16.62■□□□□ 0.25
DNMT1-213ENST00000587604 CHD9Q3L8U1 2897 aa16.61■□□□□ 0.25
DNMT1-213ENST00000587604 FGRP09769 529 aa16.61■□□□□ 0.25
DNMT1-213ENST00000587604 ALX1Q15699 326 aa16.61■□□□□ 0.25
DNMT1-213ENST00000587604 RAB30Q15771 203 aa16.61■□□□□ 0.25
DNMT1-213ENST00000587604 VPS53Q5VIR6 699 aa16.61■□□□□ 0.25
DNMT1-213ENST00000587604 BTNL9Q6UXG8 535 aa16.61■□□□□ 0.25
DNMT1-213ENST00000587604 NSMFQ6X4W1 530 aa16.61■□□□□ 0.25
DNMT1-213ENST00000587604 KIAA1211Q6ZU35 1233 aa16.61■□□□□ 0.25
DNMT1-213ENST00000587604 FBXO16Q8IX29 292 aaPredicted RBP16.61■□□□□ 0.25
DNMT1-213ENST00000587604 GAS2L1Q99501 681 aaPredicted RBP16.61■□□□□ 0.25
DNMT1-213ENST00000587604 RANBP17Q9H2T7 1088 aaKnown RBP16.61■□□□□ 0.25
DNMT1-213ENST00000587604 ADD3Q9UEY8 706 aaKnown RBP16.61■□□□□ 0.25
DNMT1-213ENST00000587604 MSRAQ9UJ68 235 aa16.61■□□□□ 0.25
DNMT1-213ENST00000587604 MTMR7Q9Y216 660 aa16.61■□□□□ 0.25
DNMT1-213ENST00000587604 LRRC37A2A6NM11 1700 aa16.61■□□□□ 0.25
DNMT1-213ENST00000587604 LOC102724159A0A0B4J2E5 919 aa16.6■□□□□ 0.25
DNMT1-213ENST00000587604 PTGS1P23219 599 aa16.6■□□□□ 0.25
DNMT1-213ENST00000587604 PWP2Q15269 919 aaKnown RBP16.6■□□□□ 0.25
DNMT1-213ENST00000587604 CCDC96Q2M329 555 aa16.6■□□□□ 0.25
DNMT1-213ENST00000587604 DUSP28Q4G0W2 176 aa16.6■□□□□ 0.25
DNMT1-213ENST00000587604 TJAP1Q5JTD0 557 aa16.6■□□□□ 0.25
DNMT1-213ENST00000587604 AKNAD1Q5T1N1 836 aa16.6■□□□□ 0.25
DNMT1-213ENST00000587604 TMEM63BQ5T3F8 832 aa16.6■□□□□ 0.25
DNMT1-213ENST00000587604 RASGRP2Q7LDG7 609 aa16.6■□□□□ 0.25
DNMT1-213ENST00000587604 EVI5LQ96CN4 794 aa16.6■□□□□ 0.25
DNMT1-213ENST00000587604 PURBQ96QR8 312 aaKnown RBP16.6■□□□□ 0.25
DNMT1-213ENST00000587604 NOC4LQ9BVI4 516 aaKnown RBP16.6■□□□□ 0.25
DNMT1-213ENST00000587604 TRPV6Q9H1D0 765 aa16.6■□□□□ 0.25
DNMT1-213ENST00000587604 PRDM12Q9H4Q4 367 aa16.6■□□□□ 0.25
DNMT1-213ENST00000587604 HELLSQ9NRZ9 838 aa16.6■□□□□ 0.25
DNMT1-213ENST00000587604 CXXC1Q9P0U4 656 aaPredicted RBP16.6■□□□□ 0.25
DNMT1-213ENST00000587604 SALL3Q9BXA9 1300 aa16.6■□□□□ 0.25
DNMT1-213ENST00000587604 GBF1Q92538 1859 aa16.59■□□□□ 0.25
DNMT1-213ENST00000587604 B4GALT4O60513 344 aa16.59■□□□□ 0.25
DNMT1-213ENST00000587604 SLC16A2P36021 539 aa16.59■□□□□ 0.25
DNMT1-213ENST00000587604 PSMC6P62333 389 aa16.59■□□□□ 0.25
DNMT1-213ENST00000587604 BAATQ14032 418 aaPredicted RBP16.59■□□□□ 0.25
DNMT1-213ENST00000587604 TTBK2Q6IQ55 1244 aa16.59■□□□□ 0.25
DNMT1-213ENST00000587604 RPUSD2Q8IZ73 545 aaKnown RBP16.59■□□□□ 0.25
DNMT1-213ENST00000587604 PRDM6Q9NQX0 595 aa16.59■□□□□ 0.25
DNMT1-213ENST00000587604 TCP11L1Q9NUJ3 509 aa16.59■□□□□ 0.25
DNMT1-213ENST00000587604 ZBTB47Q9UFB7 747 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms