RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 SH2B1Q9NRF2 756 aaPredicted RBP18.72■□□□□ 0.59
ATG4D-205ENST00000586477 SLC1A4P43007 532 aa18.71■□□□□ 0.59
ATG4D-205ENST00000586477 TOB2Q14106 344 aaPredicted RBP18.71■□□□□ 0.59
ATG4D-205ENST00000586477 ASPRV1Q53RT3 343 aa18.71■□□□□ 0.59
ATG4D-205ENST00000586477 KCTD1Q719H9 257 aa18.71■□□□□ 0.59
ATG4D-205ENST00000586477 CPXCR1Q8N123 301 aa18.71■□□□□ 0.59
ATG4D-205ENST00000586477 RBM28Q9NW13 759 aaKnown RBP18.71■□□□□ 0.59
ATG4D-205ENST00000586477 NAP1L2Q9ULW6 460 aaPredicted RBP18.71■□□□□ 0.59
ATG4D-205ENST00000586477 NR2E3Q9Y5X4 410 aa18.71■□□□□ 0.59
ATG4D-205ENST00000586477 MCM3APO60318 1980 aa18.71■□□□□ 0.59
ATG4D-205ENST00000586477 ZNF536O15090 1300 aa18.71■□□□□ 0.59
ATG4D-205ENST00000586477 GOLGA8BA8MQT2 603 aa18.7■□□□□ 0.58
ATG4D-205ENST00000586477 PLA2G6O60733 806 aa18.7■□□□□ 0.58
ATG4D-205ENST00000586477 PARP1P09874 1014 aaKnown RBP18.7■□□□□ 0.58
ATG4D-205ENST00000586477 APOBRQ0VD83 1088 aa18.7■□□□□ 0.58
ATG4D-205ENST00000586477 TROAPQ12815 778 aa18.7■□□□□ 0.58
ATG4D-205ENST00000586477 PRAMEF19Q5SWL8 479 aa18.7■□□□□ 0.58
ATG4D-205ENST00000586477 CPLX2Q6PUV4 134 aaKnown RBP18.7■□□□□ 0.58
ATG4D-205ENST00000586477 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.7■□□□□ 0.58
ATG4D-205ENST00000586477 LZTS2Q9BRK4 669 aa18.7■□□□□ 0.58
ATG4D-205ENST00000586477 PFASO15067 1338 aa18.7■□□□□ 0.58
ATG4D-205ENST00000586477 NID2Q14112 1375 aa18.69■□□□□ 0.58
ATG4D-205ENST00000586477 LCTP09848 1927 aa18.69■□□□□ 0.58
ATG4D-205ENST00000586477 DNAJC25-GNG10A0A024R161 153 aa18.69■□□□□ 0.58
ATG4D-205ENST00000586477 ZBED4O75132 1171 aa18.69■□□□□ 0.58
ATG4D-205ENST00000586477 SNHG28P0DPA3 235 aa18.69■□□□□ 0.58
ATG4D-205ENST00000586477 COL6A1P12109 1028 aa18.69■□□□□ 0.58
ATG4D-205ENST00000586477 COPB2P35606 906 aa18.69■□□□□ 0.58
ATG4D-205ENST00000586477 METAP2P50579 478 aaKnown RBP eCLIP18.69■□□□□ 0.58
ATG4D-205ENST00000586477 STAT2P52630 851 aa18.69■□□□□ 0.58
ATG4D-205ENST00000586477 SNAP25P60880 206 aa18.69■□□□□ 0.58
ATG4D-205ENST00000586477 TTBK2Q6IQ55 1244 aa18.69■□□□□ 0.58
ATG4D-205ENST00000586477 NECAB2Q7Z6G3 386 aa18.69■□□□□ 0.58
ATG4D-205ENST00000586477 MICU3Q86XE3 530 aa18.69■□□□□ 0.58
ATG4D-205ENST00000586477 HSCBQ8IWL3 235 aa18.69■□□□□ 0.58
ATG4D-205ENST00000586477 NUP133Q8WUM0 1156 aa18.69■□□□□ 0.58
ATG4D-205ENST00000586477 SNX21Q969T3 373 aa18.69■□□□□ 0.58
ATG4D-205ENST00000586477 FGD4Q96M96 766 aa18.69■□□□□ 0.58
ATG4D-205ENST00000586477 SLKQ9H2G2 1235 aaPredicted RBP18.69■□□□□ 0.58
ATG4D-205ENST00000586477 DDX20Q9UHI6 824 aaKnown RBP18.69■□□□□ 0.58
ATG4D-205ENST00000586477 TRIOBPQ9H2D6 2365 aa18.69■□□□□ 0.58
ATG4D-205ENST00000586477 GOLGA8AA7E2F4 631 aa18.68■□□□□ 0.58
ATG4D-205ENST00000586477 PDHBP11177 359 aa18.68■□□□□ 0.58
ATG4D-205ENST00000586477 ANP32AP39687 249 aaKnown RBP18.68■□□□□ 0.58
ATG4D-205ENST00000586477 OAZ1P54368 228 aa18.68■□□□□ 0.58
ATG4D-205ENST00000586477 COL9A3Q14050 684 aaPredicted RBP18.68■□□□□ 0.58
ATG4D-205ENST00000586477 KCTD2Q14681 263 aa18.68■□□□□ 0.58
ATG4D-205ENST00000586477 GRM4Q14833 912 aa18.68■□□□□ 0.58
ATG4D-205ENST00000586477 CCDC96Q2M329 555 aa18.68■□□□□ 0.58
ATG4D-205ENST00000586477 FAM160B2Q86V87 743 aa18.68■□□□□ 0.58
ATG4D-205ENST00000586477 FANCBQ8NB91 859 aa18.68■□□□□ 0.58
ATG4D-205ENST00000586477 GPHNQ9NQX3 736 aaPredicted RBP18.68■□□□□ 0.58
ATG4D-205ENST00000586477 PRR12Q9ULL5 1215 aa18.68■□□□□ 0.58
ATG4D-205ENST00000586477 ISY1Q9ULR0 285 aaKnown RBP18.68■□□□□ 0.58
ATG4D-205ENST00000586477 EVI5O60447 810 aa18.67■□□□□ 0.58
ATG4D-205ENST00000586477 TAL1P17542 331 aaPredicted RBP18.67■□□□□ 0.58
ATG4D-205ENST00000586477 PDIA3P30101 505 aaKnown RBP18.67■□□□□ 0.58
ATG4D-205ENST00000586477 ZNF543Q08ER8 600 aa18.67■□□□□ 0.58
ATG4D-205ENST00000586477 BECN1Q14457 450 aa18.67■□□□□ 0.58
ATG4D-205ENST00000586477 RTN1Q16799 776 aa18.67■□□□□ 0.58
ATG4D-205ENST00000586477 CHRDL2Q6WN34 429 aa18.67■□□□□ 0.58
ATG4D-205ENST00000586477 CHURC1Q8WUH1 139 aa18.67■□□□□ 0.58
ATG4D-205ENST00000586477 AGBL1Q96MI9 1066 aa18.67■□□□□ 0.58
ATG4D-205ENST00000586477 C11orf49Q9H6J7 331 aa18.67■□□□□ 0.58
ATG4D-205ENST00000586477 BRPF3Q9ULD4 1205 aa18.67■□□□□ 0.58
ATG4D-205ENST00000586477 MTMR7Q9Y216 660 aa18.67■□□□□ 0.58
ATG4D-205ENST00000586477 DIS3Q9Y2L1 958 aaKnown RBP18.67■□□□□ 0.58
ATG4D-205ENST00000586477 CPLX1O14810 134 aa18.66■□□□□ 0.58
ATG4D-205ENST00000586477 CDKL5O76039 1030 aa18.66■□□□□ 0.58
ATG4D-205ENST00000586477 FDX1P10109 184 aa18.66■□□□□ 0.58
ATG4D-205ENST00000586477 SMARCA1P28370 1054 aa18.66■□□□□ 0.58
ATG4D-205ENST00000586477 CNGA1P29973 690 aa18.66■□□□□ 0.58
ATG4D-205ENST00000586477 SLC4A3P48751 1232 aa18.66■□□□□ 0.58
ATG4D-205ENST00000586477 ANO1Q5XXA6 986 aa18.66■□□□□ 0.58
ATG4D-205ENST00000586477 BTNL9Q6UXG8 535 aa18.66■□□□□ 0.58
ATG4D-205ENST00000586477 TINF2Q9BSI4 451 aa18.66■□□□□ 0.58
ATG4D-205ENST00000586477 SENP2Q9HC62 589 aa18.66■□□□□ 0.58
ATG4D-205ENST00000586477 SLC5A4Q9NY91 659 aa18.66■□□□□ 0.58
ATG4D-205ENST00000586477 TPCN1Q9ULQ1 816 aa18.66■□□□□ 0.58
ATG4D-205ENST00000586477 SEPT4O43236 478 aa18.65■□□□□ 0.58
ATG4D-205ENST00000586477 PFKFB2O60825 505 aa18.65■□□□□ 0.58
ATG4D-205ENST00000586477 SLC16A2P36021 539 aa18.65■□□□□ 0.58
ATG4D-205ENST00000586477 FXR1P51114 621 aaKnown RBP eCLIP18.65■□□□□ 0.58
ATG4D-205ENST00000586477 IKQ13123 557 aaPredicted RBP18.65■□□□□ 0.58
ATG4D-205ENST00000586477 RBM27Q9P2N5 1060 aaKnown RBP18.65■□□□□ 0.58
ATG4D-205ENST00000586477 PNMA2Q9UL42 364 aa18.65■□□□□ 0.58
ATG4D-205ENST00000586477 FRMPD2Q68DX3 1309 aaPredicted RBP18.65■□□□□ 0.58
ATG4D-205ENST00000586477 PALM3A6NDB9 673 aaPredicted RBP18.64■□□□□ 0.57
ATG4D-205ENST00000586477 ZNF865P0CJ78 1059 aaPredicted RBP18.64■□□□□ 0.57
ATG4D-205ENST00000586477 NOL8Q76FK4 1167 aaKnown RBP18.64■□□□□ 0.57
ATG4D-205ENST00000586477 CHST13Q8NET6 341 aa18.64■□□□□ 0.57
ATG4D-205ENST00000586477 MYL10Q9BUA6 226 aa18.64■□□□□ 0.57
ATG4D-205ENST00000586477 RANBP17Q9H2T7 1088 aaKnown RBP18.64■□□□□ 0.57
ATG4D-205ENST00000586477 PRO3102Q9H379 93 aa18.64■□□□□ 0.57
ATG4D-205ENST00000586477 GPCPD1Q9NPB8 672 aa18.64■□□□□ 0.57
ATG4D-205ENST00000586477 HOMER2Q9NSB8 354 aa18.64■□□□□ 0.57
ATG4D-205ENST00000586477 KLRF2D3W0D1 207 aa18.63■□□□□ 0.57
ATG4D-205ENST00000586477 K7ELQ4 463 aaPredicted RBP18.63■□□□□ 0.57
ATG4D-205ENST00000586477 MSCO60682 206 aa18.63■□□□□ 0.57
ATG4D-205ENST00000586477 SNAI1O95863 264 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms