RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 SSRP1Q08945 709 aaKnown RBP14.58□□□□□ -0.08
VMP1-202ENST00000585847 TRIM29Q14134 588 aa14.58□□□□□ -0.08
VMP1-202ENST00000585847 FAM110CQ1W6H9 321 aa14.58□□□□□ -0.08
VMP1-202ENST00000585847 SMCR8Q8TEV9 937 aaPredicted RBP14.58□□□□□ -0.08
VMP1-202ENST00000585847 GTF3C2Q8WUA4 911 aaPredicted RBP14.58□□□□□ -0.08
VMP1-202ENST00000585847 TNPO1Q92973 898 aaKnown RBP14.58□□□□□ -0.08
VMP1-202ENST00000585847 PAGR1Q9BTK6 254 aa14.58□□□□□ -0.08
VMP1-202ENST00000585847 ANP32EQ9BTT0 268 aa14.58□□□□□ -0.08
VMP1-202ENST00000585847 SPZ1Q9BXG8 430 aa14.58□□□□□ -0.08
VMP1-202ENST00000585847 FOXD4L1Q9NU39 408 aa14.58□□□□□ -0.08
VMP1-202ENST00000585847 ORC3Q9UBD5 711 aaPredicted RBP14.58□□□□□ -0.08
VMP1-202ENST00000585847 ISY1Q9ULR0 285 aaKnown RBP14.58□□□□□ -0.08
VMP1-202ENST00000585847 RABGAP1Q9Y3P9 1069 aa14.58□□□□□ -0.08
VMP1-202ENST00000585847 TRIM17Q9Y577 477 aa14.58□□□□□ -0.08
VMP1-202ENST00000585847 ZNFX1Q9P2E3 1918 aaKnown RBP14.57□□□□□ -0.08
VMP1-202ENST00000585847 ATP2A1O14983 1001 aa14.57□□□□□ -0.08
VMP1-202ENST00000585847 CTDNEP1O95476 244 aa14.57□□□□□ -0.08
VMP1-202ENST00000585847 F13A1P00488 732 aa14.57□□□□□ -0.08
VMP1-202ENST00000585847 RAVER2Q9HCJ3 691 aaKnown RBP14.57□□□□□ -0.08
VMP1-202ENST00000585847 VAT1LQ9HCJ6 419 aa14.57□□□□□ -0.08
VMP1-202ENST00000585847 MTMR6Q9Y217 621 aa14.57□□□□□ -0.08
VMP1-202ENST00000585847 RIPK3Q9Y572 518 aa14.57□□□□□ -0.08
VMP1-202ENST00000585847 IKQ13123 557 aaPredicted RBP14.56□□□□□ -0.08
VMP1-202ENST00000585847 CDC37Q16543 378 aaPredicted RBP14.56□□□□□ -0.08
VMP1-202ENST00000585847 QRICH1Q2TAL8 776 aa14.56□□□□□ -0.08
VMP1-202ENST00000585847 SKOR2Q2VWA4 1001 aaPredicted RBP14.56□□□□□ -0.08
VMP1-202ENST00000585847 BRAPQ7Z569 592 aa14.56□□□□□ -0.08
VMP1-202ENST00000585847 MB21D1Q8N884 522 aa14.56□□□□□ -0.08
VMP1-202ENST00000585847 C8orf76Q96K31 380 aa14.56□□□□□ -0.08
VMP1-202ENST00000585847 AGBL1Q96MI9 1066 aa14.56□□□□□ -0.08
VMP1-202ENST00000585847 PIGSQ96S52 555 aa14.56□□□□□ -0.08
VMP1-202ENST00000585847 MOV10L1Q9BXT6 1211 aaKnown RBP14.56□□□□□ -0.08
VMP1-202ENST00000585847 SPATC1LQ9H0A9 340 aa14.56□□□□□ -0.08
VMP1-202ENST00000585847 PORCNQ9H237 461 aa14.56□□□□□ -0.08
VMP1-202ENST00000585847 LCTP09848 1927 aa14.55□□□□□ -0.08
VMP1-202ENST00000585847 hCG_1642624A0A1W2PR95 340 aa14.55□□□□□ -0.08
VMP1-202ENST00000585847 PRPF3O43395 683 aaKnown RBP14.55□□□□□ -0.08
VMP1-202ENST00000585847 JAK2O60674 1132 aa14.55□□□□□ -0.08
VMP1-202ENST00000585847 ZBED4O75132 1171 aa14.55□□□□□ -0.08
VMP1-202ENST00000585847 FDX1P10109 184 aa14.55□□□□□ -0.08
VMP1-202ENST00000585847 TRAF1Q13077 416 aa14.55□□□□□ -0.08
VMP1-202ENST00000585847 SAFBQ15424 915 aaKnown RBP eCLIP14.55□□□□□ -0.08
VMP1-202ENST00000585847 CCDC174Q6PII3 467 aa14.55□□□□□ -0.08
VMP1-202ENST00000585847 RIOX2Q8IUF8 465 aa14.55□□□□□ -0.08
VMP1-202ENST00000585847 CCDC82Q8N4S0 544 aa14.55□□□□□ -0.08
VMP1-202ENST00000585847 GPRC5AQ8NFJ5 357 aa14.55□□□□□ -0.08
VMP1-202ENST00000585847 FBXO18Q8NFZ0 1043 aa14.55□□□□□ -0.08
VMP1-202ENST00000585847 ERO1AQ96HE7 468 aa14.55□□□□□ -0.08
VMP1-202ENST00000585847 ARHGAP39Q9C0H5 1083 aa14.55□□□□□ -0.08
VMP1-202ENST00000585847 EFCC1Q9HA90 598 aa14.55□□□□□ -0.08
VMP1-202ENST00000585847 VPS37CA5D8V6 355 aaPredicted RBP14.54□□□□□ -0.08
VMP1-202ENST00000585847 PPFIA3O75145 1194 aa14.54□□□□□ -0.08
VMP1-202ENST00000585847 ICAM1P05362 532 aa14.54□□□□□ -0.08
VMP1-202ENST00000585847 MCM4P33991 863 aa14.54□□□□□ -0.08
VMP1-202ENST00000585847 STAT3P40763 770 aa14.54□□□□□ -0.08
VMP1-202ENST00000585847 OAZ1P54368 228 aa14.54□□□□□ -0.08
VMP1-202ENST00000585847 PKN1Q16512 942 aa14.54□□□□□ -0.08
VMP1-202ENST00000585847 GALNT17Q6IS24 598 aa14.54□□□□□ -0.08
VMP1-202ENST00000585847 OTOP1Q7RTM1 612 aa14.54□□□□□ -0.08
VMP1-202ENST00000585847 CPXCR1Q8N123 301 aa14.54□□□□□ -0.08
VMP1-202ENST00000585847 CCDC12Q8WUD4 166 aaPredicted RBP14.54□□□□□ -0.08
VMP1-202ENST00000585847 PHKBQ93100 1093 aa14.54□□□□□ -0.08
VMP1-202ENST00000585847 SHISA4Q96DD7 197 aa14.54□□□□□ -0.08
VMP1-202ENST00000585847 BRMS1Q9HCU9 246 aa14.54□□□□□ -0.08
VMP1-202ENST00000585847 SH3GLB2Q9NR46 395 aa14.54□□□□□ -0.08
VMP1-202ENST00000585847 PNMA6FA0A0J9YX94 578 aa14.53□□□□□ -0.08
VMP1-202ENST00000585847 ZBTB5O15062 677 aa14.53□□□□□ -0.08
VMP1-202ENST00000585847 BAG4O95429 457 aaKnown RBP14.53□□□□□ -0.08
VMP1-202ENST00000585847 LACTBP83111 547 aaPredicted RBP14.53□□□□□ -0.08
VMP1-202ENST00000585847 SP3Q02447 781 aa14.53□□□□□ -0.08
VMP1-202ENST00000585847 HOMER1Q86YM7 354 aa14.53□□□□□ -0.08
VMP1-202ENST00000585847 TMEM87AQ8NBN3 555 aa14.53□□□□□ -0.08
VMP1-202ENST00000585847 CCDC148Q8NFR7 591 aa14.53□□□□□ -0.08
VMP1-202ENST00000585847 CD99L2Q8TCZ2 262 aa14.53□□□□□ -0.08
VMP1-202ENST00000585847 CLEC4DQ8WXI8 215 aa14.53□□□□□ -0.08
VMP1-202ENST00000585847 PIBF1Q8WXW3 757 aa14.53□□□□□ -0.08
VMP1-202ENST00000585847 ALG1Q9BT22 464 aa14.53□□□□□ -0.08
VMP1-202ENST00000585847 TEX13BQ9BXU2 312 aa14.53□□□□□ -0.08
VMP1-202ENST00000585847 SCAND2PQ9GZW5 306 aaPredicted RBP14.53□□□□□ -0.08
VMP1-202ENST00000585847 CFAP45Q9UL16 551 aa14.53□□□□□ -0.08
VMP1-202ENST00000585847 ZDHHC9Q9Y397 364 aa14.53□□□□□ -0.08
VMP1-202ENST00000585847 OPLAHO14841 1288 aa14.52□□□□□ -0.09
VMP1-202ENST00000585847 ECM2O94769 699 aaPredicted RBP14.52□□□□□ -0.09
VMP1-202ENST00000585847 FDPSP14324 419 aaKnown RBP14.52□□□□□ -0.09
VMP1-202ENST00000585847 ERCC3P19447 782 aa14.52□□□□□ -0.09
VMP1-202ENST00000585847 CALML3P27482 149 aa14.52□□□□□ -0.09
VMP1-202ENST00000585847 KRT85P78386 507 aa14.52□□□□□ -0.09
VMP1-202ENST00000585847 PLS1Q14651 629 aa14.52□□□□□ -0.09
VMP1-202ENST00000585847 NFKBIBQ15653 356 aa14.52□□□□□ -0.09
VMP1-202ENST00000585847 MUM1L1Q5H9M0 696 aa14.52□□□□□ -0.09
VMP1-202ENST00000585847 SNRNP48Q6IEG0 339 aaKnown RBP14.52□□□□□ -0.09
VMP1-202ENST00000585847 TYW1BQ6NUM6 668 aa14.52□□□□□ -0.09
VMP1-202ENST00000585847 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.52□□□□□ -0.09
VMP1-202ENST00000585847 SHCBP1Q8NEM2 672 aa14.52□□□□□ -0.09
VMP1-202ENST00000585847 DDX11Q96FC9 970 aa14.52□□□□□ -0.09
VMP1-202ENST00000585847 TRIM47Q96LD4 638 aa14.52□□□□□ -0.09
VMP1-202ENST00000585847 SLC26A6Q9BXS9 759 aa14.52□□□□□ -0.09
VMP1-202ENST00000585847 V9GY48 417 aaPredicted RBP14.52□□□□□ -0.09
VMP1-202ENST00000585847 ELP1O95163 1332 aa14.51□□□□□ -0.09
VMP1-202ENST00000585847 ZNF236Q9UL36 1845 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms