RNA–Protein interactions for RNA: ENST00000585672.5

MBD1-212, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-212ENST00000585672 HYOU1Q9Y4L1 999 aa16.49■□□□□ 0.23
MBD1-212ENST00000585672 IFIT3O14879 490 aaKnown RBP16.48■□□□□ 0.23
MBD1-212ENST00000585672 NCK2O43639 380 aa16.48■□□□□ 0.23
MBD1-212ENST00000585672 FAM163BP0C2L3 166 aa16.48■□□□□ 0.23
MBD1-212ENST00000585672 TCP1P17987 556 aaKnown RBP16.48■□□□□ 0.23
MBD1-212ENST00000585672 METAP2P50579 478 aaKnown RBP eCLIP16.48■□□□□ 0.23
MBD1-212ENST00000585672 TXNDC2Q86VQ3 553 aa16.48■□□□□ 0.23
MBD1-212ENST00000585672 SPICE1Q8N0Z3 855 aa16.48■□□□□ 0.23
MBD1-212ENST00000585672 MS4A14Q96JA4 679 aa16.48■□□□□ 0.23
MBD1-212ENST00000585672 OSBPL1AQ9BXW6 950 aa16.48■□□□□ 0.23
MBD1-212ENST00000585672 G3BP2Q9UN86 482 aaKnown RBP16.48■□□□□ 0.23
MBD1-212ENST00000585672 DPPA5A6NC42 116 aa16.48■□□□□ 0.23
MBD1-212ENST00000585672 H0YGN5 161 aa16.48■□□□□ 0.23
MBD1-212ENST00000585672 MAP3K13O43283 966 aa16.48■□□□□ 0.23
MBD1-212ENST00000585672 ORC4O43929 436 aa16.48■□□□□ 0.23
MBD1-212ENST00000585672 SMIM24O75264 130 aa16.48■□□□□ 0.23
MBD1-212ENST00000585672 TACC1O75410 805 aa16.48■□□□□ 0.23
MBD1-212ENST00000585672 MOCS3O95396 460 aa16.48■□□□□ 0.23
MBD1-212ENST00000585672 GSTA1P08263 222 aa16.48■□□□□ 0.23
MBD1-212ENST00000585672 PYGBP11216 843 aa16.48■□□□□ 0.23
MBD1-212ENST00000585672 HSPA9P38646 679 aaKnown RBP16.48■□□□□ 0.23
MBD1-212ENST00000585672 EPSTI1Q96J88 318 aa16.48■□□□□ 0.23
MBD1-212ENST00000585672 TSGA10Q9BZW7 698 aa16.48■□□□□ 0.23
MBD1-212ENST00000585672 PLCB1Q9NQ66 1216 aa16.48■□□□□ 0.23
MBD1-212ENST00000585672 COPRSQ9NQ92 184 aa16.48■□□□□ 0.23
MBD1-212ENST00000585672 AGPAT5Q9NUQ2 364 aa16.48■□□□□ 0.23
MBD1-212ENST00000585672 VPS54Q9P1Q0 977 aa16.48■□□□□ 0.23
MBD1-212ENST00000585672 NFS1Q9Y697 457 aa16.48■□□□□ 0.23
MBD1-212ENST00000585672 A0A1B0GVG6 124 aa16.47■□□□□ 0.23
MBD1-212ENST00000585672 RANBP6O60518 1105 aaKnown RBP16.47■□□□□ 0.23
MBD1-212ENST00000585672 CDKL5O76039 1030 aa16.47■□□□□ 0.23
MBD1-212ENST00000585672 PAFAH1B1P43034 410 aa16.47■□□□□ 0.23
MBD1-212ENST00000585672 PPP2R2AP63151 447 aa16.47■□□□□ 0.23
MBD1-212ENST00000585672 PDIA5Q14554 519 aa16.47■□□□□ 0.23
MBD1-212ENST00000585672 CCDC96Q2M329 555 aa16.47■□□□□ 0.23
MBD1-212ENST00000585672 MTHFD1LQ6UB35 978 aa16.47■□□□□ 0.23
MBD1-212ENST00000585672 KRT26Q7Z3Y9 468 aa16.47■□□□□ 0.23
MBD1-212ENST00000585672 SPATA21Q7Z572 469 aa16.47■□□□□ 0.23
MBD1-212ENST00000585672 NOC3LQ8WTT2 800 aaKnown RBP16.47■□□□□ 0.23
MBD1-212ENST00000585672 PIDD1Q9HB75 910 aa16.47■□□□□ 0.23
MBD1-212ENST00000585672 CHCHD3Q9NX63 227 aaKnown RBP16.47■□□□□ 0.23
MBD1-212ENST00000585672 RWDD2AQ9UIY3 292 aa16.47■□□□□ 0.23
MBD1-212ENST00000585672 TSPOAP1O95153 1857 aa16.47■□□□□ 0.23
MBD1-212ENST00000585672 CPDO75976 1380 aa16.47■□□□□ 0.23
MBD1-212ENST00000585672 RNF8O76064 485 aa16.47■□□□□ 0.23
MBD1-212ENST00000585672 RANBP1P43487 201 aa16.47■□□□□ 0.23
MBD1-212ENST00000585672 PTPN12Q05209 780 aaKnown RBP16.47■□□□□ 0.23
MBD1-212ENST00000585672 MAP3K12Q12852 859 aa16.47■□□□□ 0.23
MBD1-212ENST00000585672 IMMTQ16891 758 aaKnown RBP16.47■□□□□ 0.23
MBD1-212ENST00000585672 RRAGBQ5VZM2 374 aa16.47■□□□□ 0.23
MBD1-212ENST00000585672 CHADLQ6NUI6 762 aa16.47■□□□□ 0.23
MBD1-212ENST00000585672 LRIG3Q6UXM1 1119 aa16.47■□□□□ 0.23
MBD1-212ENST00000585672 ERICH1Q86X53 443 aa16.47■□□□□ 0.23
MBD1-212ENST00000585672 IRF2BP1Q8IU81 584 aa16.47■□□□□ 0.23
MBD1-212ENST00000585672 CCDC170Q8IYT3 715 aa16.47■□□□□ 0.23
MBD1-212ENST00000585672 GALNT15Q8N3T1 639 aa16.47■□□□□ 0.23
MBD1-212ENST00000585672 WHAMMQ8TF30 809 aa16.47■□□□□ 0.23
MBD1-212ENST00000585672 PRCCQ92733 491 aaPredicted RBP16.47■□□□□ 0.23
MBD1-212ENST00000585672 STAMQ92783 540 aa16.47■□□□□ 0.23
MBD1-212ENST00000585672 LGR6Q9HBX8 967 aa16.47■□□□□ 0.23
MBD1-212ENST00000585672 STRN4Q9NRL3 753 aa16.47■□□□□ 0.23
MBD1-212ENST00000585672 ACEP12821 1306 aa16.46■□□□□ 0.23
MBD1-212ENST00000585672 CFAP73A6NFT4 308 aa16.46■□□□□ 0.23
MBD1-212ENST00000585672 KCNJ2P63252 427 aa16.46■□□□□ 0.23
MBD1-212ENST00000585672 USP4Q13107 963 aa16.46■□□□□ 0.23
MBD1-212ENST00000585672 ODF2Q5BJF6 829 aa16.46■□□□□ 0.23
MBD1-212ENST00000585672 ANKRD20A2Q5SQ80 823 aa16.46■□□□□ 0.23
MBD1-212ENST00000585672 ANKRD20A1Q5TYW2 823 aa16.46■□□□□ 0.23
MBD1-212ENST00000585672 ANKRD20A3Q5VUR7 823 aa16.46■□□□□ 0.23
MBD1-212ENST00000585672 PLPPR3Q6T4P5 718 aa16.46■□□□□ 0.23
MBD1-212ENST00000585672 CCDC197Q8NCU1 140 aa16.46■□□□□ 0.23
MBD1-212ENST00000585672 NCOA7Q8NI08 942 aa16.46■□□□□ 0.23
MBD1-212ENST00000585672 NKX2-3Q8TAU0 364 aa16.46■□□□□ 0.23
MBD1-212ENST00000585672 AGAP1Q9UPQ3 857 aa16.46■□□□□ 0.23
MBD1-212ENST00000585672 MYO5AQ9Y4I1 1855 aaKnown RBP16.46■□□□□ 0.23
MBD1-212ENST00000585672 DCDC2CA8MYV0 355 aa16.46■□□□□ 0.22
MBD1-212ENST00000585672 STXBP3O00186 592 aa16.46■□□□□ 0.22
MBD1-212ENST00000585672 RNF113AO15541 343 aaKnown RBP16.46■□□□□ 0.22
MBD1-212ENST00000585672 LUC7L3O95232 432 aaKnown RBP16.46■□□□□ 0.22
MBD1-212ENST00000585672 IGKV5-2P06315 115 aa16.46■□□□□ 0.22
MBD1-212ENST00000585672 CCND1P24385 295 aa16.46■□□□□ 0.22
MBD1-212ENST00000585672 HSD17B3P37058 310 aa16.46■□□□□ 0.22
MBD1-212ENST00000585672 RFX5P48382 616 aaPredicted RBP16.46■□□□□ 0.22
MBD1-212ENST00000585672 ZNF844Q08AG5 666 aa16.46■□□□□ 0.22
MBD1-212ENST00000585672 SF3A3Q12874 501 aaKnown RBP eCLIP16.46■□□□□ 0.223e-8■■■■■ 54.4
MBD1-212ENST00000585672 NTRK3Q16288 839 aa16.46■□□□□ 0.22
MBD1-212ENST00000585672 ZNF507Q8TCN5 953 aa16.46■□□□□ 0.22
MBD1-212ENST00000585672 OSBP2Q969R2 916 aa16.46■□□□□ 0.22
MBD1-212ENST00000585672 SH2D4AQ9H788 454 aa16.46■□□□□ 0.22
MBD1-212ENST00000585672 ARHGEF10LQ9HCE6 1279 aa16.46■□□□□ 0.22
MBD1-212ENST00000585672 DENND2AQ9ULE3 1009 aa16.46■□□□□ 0.22
MBD1-212ENST00000585672 NALCNQ8IZF0 1738 aa16.45■□□□□ 0.22
MBD1-212ENST00000585672 FGAP02671 866 aa16.45■□□□□ 0.22
MBD1-212ENST00000585672 IARSP41252 1262 aaKnown RBP16.45■□□□□ 0.22
MBD1-212ENST00000585672 PAK1Q13153 545 aa16.45■□□□□ 0.22
MBD1-212ENST00000585672 FAM133BQ5BKY9 247 aaKnown RBP16.45■□□□□ 0.22
MBD1-212ENST00000585672 PPP1R15BQ5SWA1 713 aa16.45■□□□□ 0.22
MBD1-212ENST00000585672 C1QTNF12Q5T7M4 302 aa16.45■□□□□ 0.22
MBD1-212ENST00000585672 RALYLQ86SE5 291 aaKnown RBP16.45■□□□□ 0.22
MBD1-212ENST00000585672 NELFBQ8WX92 580 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms