RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 PPIGQ13427 754 aaKnown RBP eCLIP17.74■□□□□ 0.43
VAPA-209ENST00000585042 HDAC1Q13547 482 aaPredicted RBP17.74■□□□□ 0.43
VAPA-209ENST00000585042 AAMPQ13685 434 aa17.74■□□□□ 0.43
VAPA-209ENST00000585042 BTNL9Q6UXG8 535 aa17.74■□□□□ 0.43
VAPA-209ENST00000585042 KCTD1Q719H9 257 aa17.74■□□□□ 0.43
VAPA-209ENST00000585042 SLC43A3Q8NBI5 491 aa17.74■□□□□ 0.43
VAPA-209ENST00000585042 TTYH1Q9H313 450 aaPredicted RBP17.74■□□□□ 0.43
VAPA-209ENST00000585042 PNMA2Q9UL42 364 aa17.74■□□□□ 0.43
VAPA-209ENST00000585042 GNEQ9Y223 722 aaKnown RBP17.74■□□□□ 0.43
VAPA-209ENST00000585042 CUL9Q8IWT3 2517 aa17.73■□□□□ 0.43
VAPA-209ENST00000585042 MCM3APO60318 1980 aa17.73■□□□□ 0.43
VAPA-209ENST00000585042 ZEB2O60315 1214 aa17.73■□□□□ 0.43
VAPA-209ENST00000585042 ICAM1P05362 532 aa17.73■□□□□ 0.43
VAPA-209ENST00000585042 PCP11498 1178 aaKnown RBP17.73■□□□□ 0.43
VAPA-209ENST00000585042 RRP1P56182 461 aaKnown RBP17.73■□□□□ 0.43
VAPA-209ENST00000585042 MCMDC2Q4G0Z9 681 aa17.73■□□□□ 0.43
VAPA-209ENST00000585042 TMEM199Q8N511 208 aa17.73■□□□□ 0.43
VAPA-209ENST00000585042 MORC4Q8TE76 937 aa17.73■□□□□ 0.43
VAPA-209ENST00000585042 CYP39A1Q9NYL5 469 aa17.73■□□□□ 0.43
VAPA-209ENST00000585042 ZMYM6O95789 1325 aa17.72■□□□□ 0.43
VAPA-209ENST00000585042 CD4P01730 458 aa17.72■□□□□ 0.43
VAPA-209ENST00000585042 FGAP02671 866 aa17.72■□□□□ 0.43
VAPA-209ENST00000585042 TOP1P11387 765 aaKnown RBP17.72■□□□□ 0.43
VAPA-209ENST00000585042 FAM126BQ8IXS8 530 aa17.72■□□□□ 0.43
VAPA-209ENST00000585042 YTHDC1Q96MU7 727 aaKnown RBP17.72■□□□□ 0.43
VAPA-209ENST00000585042 TTC14Q96N46 770 aa17.72■□□□□ 0.43
VAPA-209ENST00000585042 AP5M1Q9H0R1 490 aa17.72■□□□□ 0.43
VAPA-209ENST00000585042 RANBP17Q9H2T7 1088 aaKnown RBP17.72■□□□□ 0.43
VAPA-209ENST00000585042 INCENPQ9NQS7 918 aa17.72■□□□□ 0.43
VAPA-209ENST00000585042 NMT2O60551 498 aa17.71■□□□□ 0.43
VAPA-209ENST00000585042 NT5C2P49902 561 aa17.71■□□□□ 0.43
VAPA-209ENST00000585042 IRX5P78411 483 aaPredicted RBP17.71■□□□□ 0.43
VAPA-209ENST00000585042 VPS53Q5VIR6 699 aa17.71■□□□□ 0.43
VAPA-209ENST00000585042 TAPT1Q6NXT6 567 aa17.71■□□□□ 0.43
VAPA-209ENST00000585042 NOL8Q76FK4 1167 aaKnown RBP17.71■□□□□ 0.43
VAPA-209ENST00000585042 MAFAQ8NHW3 353 aaPredicted RBP17.71■□□□□ 0.43
VAPA-209ENST00000585042 VTA1Q9NP79 307 aa17.71■□□□□ 0.43
VAPA-209ENST00000585042 ADD3Q9UEY8 706 aaKnown RBP17.71■□□□□ 0.43
VAPA-209ENST00000585042 CCPG1Q9ULG6 757 aa17.71■□□□□ 0.43
VAPA-209ENST00000585042 UNC80Q8N2C7 3258 aa17.71■□□□□ 0.42
VAPA-209ENST00000585042 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.7■□□□□ 0.42
VAPA-209ENST00000585042 FSCN1Q16658 493 aaKnown RBP17.7■□□□□ 0.42
VAPA-209ENST00000585042 MUM1L1Q5H9M0 696 aa17.7■□□□□ 0.42
VAPA-209ENST00000585042 TMEM240Q5SV17 173 aa17.7■□□□□ 0.42
VAPA-209ENST00000585042 RASIP1Q5U651 963 aa17.7■□□□□ 0.42
VAPA-209ENST00000585042 TLK2Q86UE8 772 aa17.7■□□□□ 0.42
VAPA-209ENST00000585042 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.7■□□□□ 0.422e-6■■□□□ 11.8
VAPA-209ENST00000585042 ASTN1O14525 1302 aa17.7■□□□□ 0.42
VAPA-209ENST00000585042 DYNC1LI2O43237 492 aaPredicted RBP17.69■□□□□ 0.42
VAPA-209ENST00000585042 HSPD1P10809 573 aaKnown RBP17.69■□□□□ 0.42
VAPA-209ENST00000585042 SMPD1P17405 629 aa17.69■□□□□ 0.42
VAPA-209ENST00000585042 DNAJB2P25686 324 aa17.69■□□□□ 0.42
VAPA-209ENST00000585042 MFAP1P55081 439 aaKnown RBP17.69■□□□□ 0.42
VAPA-209ENST00000585042 ITGA7Q13683 1181 aa17.69■□□□□ 0.42
VAPA-209ENST00000585042 CCDC96Q2M329 555 aa17.69■□□□□ 0.42
VAPA-209ENST00000585042 PSRC1Q6PGN9 363 aaPredicted RBP17.69■□□□□ 0.42
VAPA-209ENST00000585042 C16orf59Q7L2K0 433 aa17.69■□□□□ 0.42
VAPA-209ENST00000585042 MYLIPQ8WY64 445 aa17.69■□□□□ 0.42
VAPA-209ENST00000585042 TMEM47Q9BQJ4 181 aa17.69■□□□□ 0.42
VAPA-209ENST00000585042 COL25A1Q9BXS0 654 aaPredicted RBP17.69■□□□□ 0.42
VAPA-209ENST00000585042 MAF1Q9H063 256 aa17.69■□□□□ 0.42
VAPA-209ENST00000585042 FOSL2P15408 326 aa17.68■□□□□ 0.42
VAPA-209ENST00000585042 CSF2RAP15509 400 aa17.68■□□□□ 0.42
VAPA-209ENST00000585042 BEX3Q00994 111 aa17.68■□□□□ 0.42
VAPA-209ENST00000585042 SYDE2Q5VT97 1194 aa17.68■□□□□ 0.42
VAPA-209ENST00000585042 CXCL17Q6UXB2 119 aa17.68■□□□□ 0.42
VAPA-209ENST00000585042 NSMFQ6X4W1 530 aa17.68■□□□□ 0.42
VAPA-209ENST00000585042 FAM227BQ96M60 508 aa17.68■□□□□ 0.42
VAPA-209ENST00000585042 TOMM22Q9NS69 142 aa17.68■□□□□ 0.42
VAPA-209ENST00000585042 SNAP25P60880 206 aa17.67■□□□□ 0.42
VAPA-209ENST00000585042 BAATQ14032 418 aaPredicted RBP17.67■□□□□ 0.42
VAPA-209ENST00000585042 DUSP28Q4G0W2 176 aa17.67■□□□□ 0.42
VAPA-209ENST00000585042 TTBK2Q6IQ55 1244 aa17.67■□□□□ 0.42
VAPA-209ENST00000585042 KIAA1211Q6ZU35 1233 aa17.67■□□□□ 0.42
VAPA-209ENST00000585042 CHMP4CQ96CF2 233 aa17.67■□□□□ 0.42
VAPA-209ENST00000585042 CRBNQ96SW2 442 aa17.67■□□□□ 0.42
VAPA-209ENST00000585042 MTIF3Q9H2K0 278 aaKnown RBP17.67■□□□□ 0.42
VAPA-209ENST00000585042 RNF41Q9H4P4 317 aaPredicted RBP17.67■□□□□ 0.42
VAPA-209ENST00000585042 ZNF576Q9H609 170 aa17.67■□□□□ 0.42
VAPA-209ENST00000585042 IL23AQ9NPF7 189 aa17.67■□□□□ 0.42
VAPA-209ENST00000585042 PDGFCQ9NRA1 345 aa17.67■□□□□ 0.42
VAPA-209ENST00000585042 A0A0D9SFI3 127 aa17.66■□□□□ 0.42
VAPA-209ENST00000585042 RBM47A0AV96 593 aaKnown RBP17.66■□□□□ 0.42
VAPA-209ENST00000585042 RRP12Q5JTH9 1297 aaKnown RBP17.66■□□□□ 0.42
VAPA-209ENST00000585042 AKNAD1Q5T1N1 836 aa17.66■□□□□ 0.42
VAPA-209ENST00000585042 MFSD6Q6ZSS7 791 aa17.66■□□□□ 0.42
VAPA-209ENST00000585042 ZNF365Q70YC5 407 aa17.66■□□□□ 0.42
VAPA-209ENST00000585042 HERVK_113Q902F9 699 aa17.66■□□□□ 0.42
VAPA-209ENST00000585042 TIFAQ96CG3 184 aa17.66■□□□□ 0.42
VAPA-209ENST00000585042 MPHOSPH6Q99547 160 aaKnown RBP17.66■□□□□ 0.42
VAPA-209ENST00000585042 HIPK3Q9H422 1215 aa17.66■□□□□ 0.42
VAPA-209ENST00000585042 POLR3EQ9NVU0 708 aa17.66■□□□□ 0.42
VAPA-209ENST00000585042 GRIN2DO15399 1336 aa17.66■□□□□ 0.42
VAPA-209ENST00000585042 B4DLN1 442 aa17.65■□□□□ 0.42
VAPA-209ENST00000585042 FGBP02675 491 aa17.65■□□□□ 0.42
VAPA-209ENST00000585042 SNHG28P0DPA3 235 aa17.65■□□□□ 0.42
VAPA-209ENST00000585042 PDHBP11177 359 aa17.65■□□□□ 0.42
VAPA-209ENST00000585042 SLC16A2P36021 539 aa17.65■□□□□ 0.42
VAPA-209ENST00000585042 ALDH5A1P51649 535 aaPredicted RBP17.65■□□□□ 0.42
VAPA-209ENST00000585042 MRPL12P52815 198 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms