RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 KRT26Q7Z3Y9 468 aa17.02■□□□□ 0.32
CDK5RAP3-236ENST00000584991 ZC3H15Q8WU90 426 aaKnown RBP17.02■□□□□ 0.32
CDK5RAP3-236ENST00000584991 GPKOWQ92917 476 aaPredicted RBP eCLIP17.02■□□□□ 0.32
CDK5RAP3-236ENST00000584991 GMCL1Q96IK5 515 aa17.02■□□□□ 0.32
CDK5RAP3-236ENST00000584991 PIGSQ96S52 555 aa17.02■□□□□ 0.32
CDK5RAP3-236ENST00000584991 WRNIP1Q96S55 665 aa17.02■□□□□ 0.32
CDK5RAP3-236ENST00000584991 NUP88Q99567 741 aaPredicted RBP17.02■□□□□ 0.32
CDK5RAP3-236ENST00000584991 GLIS2Q9BZE0 524 aaPredicted RBP17.02■□□□□ 0.32
CDK5RAP3-236ENST00000584991 BTBD18B2RXH4 712 aa17.01■□□□□ 0.31
CDK5RAP3-236ENST00000584991 PRKG1Q13976 671 aa17.01■□□□□ 0.31
CDK5RAP3-236ENST00000584991 DIS3L2Q8IYB7 885 aaKnown RBP17.01■□□□□ 0.31
CDK5RAP3-236ENST00000584991 SPICE1Q8N0Z3 855 aa17.01■□□□□ 0.31
CDK5RAP3-236ENST00000584991 PHF20Q9BVI0 1012 aa17.01■□□□□ 0.31
CDK5RAP3-236ENST00000584991 GOPCQ9HD26 462 aa17.01■□□□□ 0.31
CDK5RAP3-236ENST00000584991 GINM1Q9NU53 330 aa17.01■□□□□ 0.31
CDK5RAP3-236ENST00000584991 CGNQ9P2M7 1197 aaKnown RBP17.01■□□□□ 0.31
CDK5RAP3-236ENST00000584991 NCAPHQ15003 741 aa17.01■□□□□ 0.31
CDK5RAP3-236ENST00000584991 ZYXQ15942 572 aaKnown RBP17.01■□□□□ 0.31
CDK5RAP3-236ENST00000584991 KIAA1755Q5JYT7 1200 aa17.01■□□□□ 0.31
CDK5RAP3-236ENST00000584991 FILIP1Q7Z7B0 1213 aa17.01■□□□□ 0.31
CDK5RAP3-236ENST00000584991 ADGRF4Q8IZF3 695 aa17.01■□□□□ 0.31
CDK5RAP3-236ENST00000584991 KIF18AQ8NI77 898 aa17.01■□□□□ 0.31
CDK5RAP3-236ENST00000584991 ZKSCAN4Q969J2 545 aaPredicted RBP17.01■□□□□ 0.31
CDK5RAP3-236ENST00000584991 JMJD4Q9H9V9 463 aa17.01■□□□□ 0.31
CDK5RAP3-236ENST00000584991 SEC63Q9UGP8 760 aaKnown RBP17.01■□□□□ 0.31
CDK5RAP3-236ENST00000584991 BMP3P12645 472 aa17■□□□□ 0.31
CDK5RAP3-236ENST00000584991 WWC2Q6AWC2 1192 aa17■□□□□ 0.31
CDK5RAP3-236ENST00000584991 HEATR3Q7Z4Q2 680 aa17■□□□□ 0.31
CDK5RAP3-236ENST00000584991 SCYL3Q8IZE3 742 aa17■□□□□ 0.31
CDK5RAP3-236ENST00000584991 OXER1Q8TDS5 423 aa17■□□□□ 0.31
CDK5RAP3-236ENST00000584991 KLRG1Q96E93 195 aa17■□□□□ 0.31
CDK5RAP3-236ENST00000584991 FOXP1Q9H334 677 aaPredicted RBP17■□□□□ 0.31
CDK5RAP3-236ENST00000584991 SH2D4AQ9H788 454 aa17■□□□□ 0.31
CDK5RAP3-236ENST00000584991 SFPQP23246 707 aaKnown RBP eCLIP16.99■□□□□ 0.31
CDK5RAP3-236ENST00000584991 NLRP5P59047 1200 aa16.99■□□□□ 0.31
CDK5RAP3-236ENST00000584991 RILPL1Q5EBL4 403 aa16.99■□□□□ 0.31
CDK5RAP3-236ENST00000584991 ZNF579Q8NAF0 562 aaKnown RBP16.99■□□□□ 0.31
CDK5RAP3-236ENST00000584991 XPO4Q9C0E2 1151 aaKnown RBP16.99■□□□□ 0.31
CDK5RAP3-236ENST00000584991 VCPKMTQ9H867 229 aa16.99■□□□□ 0.31
CDK5RAP3-236ENST00000584991 SH3GLB2Q9NR46 395 aa16.99■□□□□ 0.31
CDK5RAP3-236ENST00000584991 USP17L10C9JJH3 530 aa16.99■□□□□ 0.31
CDK5RAP3-236ENST00000584991 TMEM232C9JQI7 657 aa16.99■□□□□ 0.31
CDK5RAP3-236ENST00000584991 STXBP3O00186 592 aa16.99■□□□□ 0.31
CDK5RAP3-236ENST00000584991 USP2O75604 605 aaPredicted RBP16.99■□□□□ 0.31
CDK5RAP3-236ENST00000584991 MYL5Q02045 173 aa16.99■□□□□ 0.31
CDK5RAP3-236ENST00000584991 NR5A1Q13285 461 aa16.99■□□□□ 0.31
CDK5RAP3-236ENST00000584991 CT47A1Q5JQC4 288 aaPredicted RBP16.99■□□□□ 0.31
CDK5RAP3-236ENST00000584991 TYW1BQ6NUM6 668 aa16.99■□□□□ 0.31
CDK5RAP3-236ENST00000584991 SHC4Q6S5L8 630 aa16.99■□□□□ 0.31
CDK5RAP3-236ENST00000584991 PNMA8AQ86V59 439 aaPredicted RBP16.99■□□□□ 0.31
CDK5RAP3-236ENST00000584991 BARHL2Q9NY43 387 aa16.99■□□□□ 0.31
CDK5RAP3-236ENST00000584991 IFNKQ9P0W0 207 aa16.99■□□□□ 0.31
CDK5RAP3-236ENST00000584991 KRT2P35908 639 aa16.98■□□□□ 0.31
CDK5RAP3-236ENST00000584991 NCBP1Q09161 790 aaKnown RBP16.98■□□□□ 0.31
CDK5RAP3-236ENST00000584991 IKQ13123 557 aaPredicted RBP16.98■□□□□ 0.31
CDK5RAP3-236ENST00000584991 NPY5RQ15761 445 aa16.98■□□□□ 0.31
CDK5RAP3-236ENST00000584991 KANK3Q6NY19 840 aa16.98■□□□□ 0.31
CDK5RAP3-236ENST00000584991 NOSTRINQ8IVI9 506 aa16.98■□□□□ 0.31
CDK5RAP3-236ENST00000584991 KRI1Q8N9T8 703 aaKnown RBP16.98■□□□□ 0.31
CDK5RAP3-236ENST00000584991 PICK1Q9NRD5 415 aa16.98■□□□□ 0.31
CDK5RAP3-236ENST00000584991 CEP131Q9UPN4 1083 aa16.98■□□□□ 0.31
CDK5RAP3-236ENST00000584991 FANCCQ00597 558 aa16.97■□□□□ 0.31
CDK5RAP3-236ENST00000584991 FAM83BQ5T0W9 1011 aa16.97■□□□□ 0.31
CDK5RAP3-236ENST00000584991 KRBA2Q6ZNG9 492 aa16.97■□□□□ 0.31
CDK5RAP3-236ENST00000584991 TRIML1Q8N9V2 468 aa16.97■□□□□ 0.31
CDK5RAP3-236ENST00000584991 TSC1Q92574 1164 aa16.97■□□□□ 0.31
CDK5RAP3-236ENST00000584991 CDCA5Q96FF9 252 aa16.97■□□□□ 0.31
CDK5RAP3-236ENST00000584991 ZMYND15Q9H091 742 aa16.97■□□□□ 0.31
CDK5RAP3-236ENST00000584991 BRMS1Q9HCU9 246 aa16.97■□□□□ 0.31
CDK5RAP3-236ENST00000584991 DACH1Q9UI36 760 aa16.97■□□□□ 0.31
CDK5RAP3-236ENST00000584991 CLEC11AQ9Y240 323 aa16.97■□□□□ 0.31
CDK5RAP3-236ENST00000584991 PNMA6FA0A0J9YX94 578 aa16.97■□□□□ 0.31
CDK5RAP3-236ENST00000584991 SMC2O95347 1197 aa16.97■□□□□ 0.31
CDK5RAP3-236ENST00000584991 POTEIP0CG38 1075 aa16.97■□□□□ 0.31
CDK5RAP3-236ENST00000584991 POTEJP0CG39 1038 aa16.97■□□□□ 0.31
CDK5RAP3-236ENST00000584991 PTPRAP18433 802 aa16.97■□□□□ 0.31
CDK5RAP3-236ENST00000584991 FCHSD1Q86WN1 690 aa16.97■□□□□ 0.31
CDK5RAP3-236ENST00000584991 CCDC148Q8NFR7 591 aa16.97■□□□□ 0.31
CDK5RAP3-236ENST00000584991 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.97■□□□□ 0.31
CDK5RAP3-236ENST00000584991 MTMR8Q96EF0 704 aa16.97■□□□□ 0.31
CDK5RAP3-236ENST00000584991 ERO1AQ96HE7 468 aa16.97■□□□□ 0.31
CDK5RAP3-236ENST00000584991 KCNH3Q9ULD8 1083 aa16.97■□□□□ 0.31
CDK5RAP3-236ENST00000584991 PHIPQ8WWQ0 1821 aa16.96■□□□□ 0.31
CDK5RAP3-236ENST00000584991 ZBTB5O15062 677 aa16.96■□□□□ 0.31
CDK5RAP3-236ENST00000584991 ADAMTS3O15072 1205 aa16.96■□□□□ 0.31
CDK5RAP3-236ENST00000584991 PPP1R12BO60237 982 aaPredicted RBP16.96■□□□□ 0.31
CDK5RAP3-236ENST00000584991 CALML3P27482 149 aa16.96■□□□□ 0.31
CDK5RAP3-236ENST00000584991 MARCKSP29966 332 aaPredicted RBP16.96■□□□□ 0.31
CDK5RAP3-236ENST00000584991 NAPAP54920 295 aa16.96■□□□□ 0.31
CDK5RAP3-236ENST00000584991 ARID5BQ14865 1188 aa16.96■□□□□ 0.31
CDK5RAP3-236ENST00000584991 NT5DC1Q5TFE4 455 aa16.96■□□□□ 0.31
CDK5RAP3-236ENST00000584991 SYDE2Q5VT97 1194 aa16.96■□□□□ 0.31
CDK5RAP3-236ENST00000584991 BTNL9Q6UXG8 535 aa16.96■□□□□ 0.31
CDK5RAP3-236ENST00000584991 COA7Q96BR5 231 aa16.96■□□□□ 0.31
CDK5RAP3-236ENST00000584991 CCDC34Q96HJ3 373 aa16.96■□□□□ 0.31
CDK5RAP3-236ENST00000584991 RRAGCQ9HB90 399 aa16.96■□□□□ 0.31
CDK5RAP3-236ENST00000584991 AS3MTQ9HBK9 375 aa16.96■□□□□ 0.31
CDK5RAP3-236ENST00000584991 DCAF8L1A6NGE4 600 aa16.95■□□□□ 0.3
CDK5RAP3-236ENST00000584991 SPP2Q13103 211 aa16.95■□□□□ 0.3
CDK5RAP3-236ENST00000584991 NOL9Q5SY16 702 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms