RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 SF3B2Q13435 895 aaKnown RBP13.28□□□□□ -0.28
ERBB2-218ENST00000584450 NCAPHQ15003 741 aa13.28□□□□□ -0.28
ERBB2-218ENST00000584450 SF3B3Q15393 1217 aaKnown RBP13.28□□□□□ -0.28
ERBB2-218ENST00000584450 WDR78Q5VTH9 848 aa13.28□□□□□ -0.28
ERBB2-218ENST00000584450 USP17L6PQ6QN14 398 aa13.28□□□□□ -0.28
ERBB2-218ENST00000584450 TXLNBQ8N3L3 684 aa13.28□□□□□ -0.28
ERBB2-218ENST00000584450 KIFC2Q96AC6 838 aa13.28□□□□□ -0.28
ERBB2-218ENST00000584450 LZTS2Q9BRK4 669 aa13.28□□□□□ -0.28
ERBB2-218ENST00000584450 RIOK1Q9BRS2 568 aaKnown RBP13.28□□□□□ -0.28
ERBB2-218ENST00000584450 PHF20Q9BVI0 1012 aa13.28□□□□□ -0.28
ERBB2-218ENST00000584450 QTRT2Q9H974 415 aaKnown RBP13.28□□□□□ -0.28
ERBB2-218ENST00000584450 RSPH14Q9UHP6 348 aa13.28□□□□□ -0.28
ERBB2-218ENST00000584450 TMEM110-MUSTN1A8MSY1 372 aa13.28□□□□□ -0.28
ERBB2-218ENST00000584450 EFCAB8A8MWE9 144 aa13.28□□□□□ -0.28
ERBB2-218ENST00000584450 SRGAP2O75044 1071 aa13.28□□□□□ -0.28
ERBB2-218ENST00000584450 TRAPPC10P48553 1259 aa13.28□□□□□ -0.28
ERBB2-218ENST00000584450 DNM2P50570 870 aa13.28□□□□□ -0.28
ERBB2-218ENST00000584450 CERKLQ49MI3 558 aaPredicted RBP13.28□□□□□ -0.28
ERBB2-218ENST00000584450 TPH2Q8IWU9 490 aa13.28□□□□□ -0.28
ERBB2-218ENST00000584450 PARD6BQ9BYG5 372 aa13.28□□□□□ -0.28
ERBB2-218ENST00000584450 GTPBP4Q9BZE4 634 aaKnown RBP13.28□□□□□ -0.28
ERBB2-218ENST00000584450 CAMTA1Q9Y6Y1 1673 aa13.28□□□□□ -0.28
ERBB2-218ENST00000584450 FCER1AP12319 257 aa13.28□□□□□ -0.28
ERBB2-218ENST00000584450 IBSPP21815 317 aaPredicted RBP13.28□□□□□ -0.28
ERBB2-218ENST00000584450 FXR1P51114 621 aaKnown RBP eCLIP13.28□□□□□ -0.28
ERBB2-218ENST00000584450 TCP11X2Q5H9J9 407 aa13.28□□□□□ -0.28
ERBB2-218ENST00000584450 C12orf60Q5U649 245 aa13.28□□□□□ -0.28
ERBB2-218ENST00000584450 SECISBP2LQ93073 1101 aaKnown RBP13.28□□□□□ -0.28
ERBB2-218ENST00000584450 THRAP3Q9Y2W1 955 aaKnown RBP13.28□□□□□ -0.28
ERBB2-218ENST00000584450 CKAP4Q07065 602 aaKnown RBP13.27□□□□□ -0.28
ERBB2-218ENST00000584450 UTP14CQ5TAP6 766 aaKnown RBP13.27□□□□□ -0.28
ERBB2-218ENST00000584450 SLFN13Q68D06 897 aa13.27□□□□□ -0.28
ERBB2-218ENST00000584450 ZNF579Q8NAF0 562 aaKnown RBP13.27□□□□□ -0.28
ERBB2-218ENST00000584450 CHP1Q99653 195 aa13.27□□□□□ -0.28
ERBB2-218ENST00000584450 BPIFA3Q9BQP9 254 aa13.27□□□□□ -0.28
ERBB2-218ENST00000584450 MYO6Q9UM54 1294 aa13.27□□□□□ -0.28
ERBB2-218ENST00000584450 SAR1BQ9Y6B6 198 aa13.27□□□□□ -0.28
ERBB2-218ENST00000584450 ECM2O94769 699 aaPredicted RBP13.27□□□□□ -0.29
ERBB2-218ENST00000584450 CD44P16070 742 aaKnown RBP13.27□□□□□ -0.29
ERBB2-218ENST00000584450 TRIM14Q14142 442 aa13.27□□□□□ -0.29
ERBB2-218ENST00000584450 TTBK2Q6IQ55 1244 aa13.27□□□□□ -0.29
ERBB2-218ENST00000584450 CETN3O15182 167 aa13.27□□□□□ -0.29
ERBB2-218ENST00000584450 MFAP3LO75121 409 aa13.27□□□□□ -0.29
ERBB2-218ENST00000584450 GCNT3O95395 438 aa13.27□□□□□ -0.29
ERBB2-218ENST00000584450 TDP2O95551 362 aa13.27□□□□□ -0.29
ERBB2-218ENST00000584450 POTEDQ86YR6 584 aa13.27□□□□□ -0.29
ERBB2-218ENST00000584450 GPR161Q8N6U8 529 aaKnown RBP13.27□□□□□ -0.29
ERBB2-218ENST00000584450 LARP4BQ92615 738 aaKnown RBP13.27□□□□□ -0.29
ERBB2-218ENST00000584450 P2RX5Q93086 422 aa13.27□□□□□ -0.29
ERBB2-218ENST00000584450 ACTN4O43707 911 aaKnown RBP13.26□□□□□ -0.29
ERBB2-218ENST00000584450 HOXA13P31271 388 aaPredicted RBP13.26□□□□□ -0.29
ERBB2-218ENST00000584450 POLR2FP61218 127 aaKnown RBP13.26□□□□□ -0.29
ERBB2-218ENST00000584450 ATP2C1P98194 919 aaPredicted RBP13.26□□□□□ -0.29
ERBB2-218ENST00000584450 TNIP1Q15025 636 aa13.26□□□□□ -0.29
ERBB2-218ENST00000584450 HDXQ7Z353 690 aa13.26□□□□□ -0.29
ERBB2-218ENST00000584450 NAA15Q9BXJ9 866 aaKnown RBP13.26□□□□□ -0.29
ERBB2-218ENST00000584450 NWD1Q149M9 1564 aa13.26□□□□□ -0.29
ERBB2-218ENST00000584450 PPEF1O14829 653 aaPredicted RBP13.26□□□□□ -0.29
ERBB2-218ENST00000584450 SORBS3O60504 671 aa13.26□□□□□ -0.29
ERBB2-218ENST00000584450 ICA1Q05084 483 aa13.26□□□□□ -0.29
ERBB2-218ENST00000584450 SF3A3Q12874 501 aaKnown RBP eCLIP13.26□□□□□ -0.292e-6■■■□□ 15.5
ERBB2-218ENST00000584450 FBXO33Q7Z6M2 555 aa13.26□□□□□ -0.29
ERBB2-218ENST00000584450 MYOCDQ8IZQ8 938 aa13.26□□□□□ -0.29
ERBB2-218ENST00000584450 LRRN4CLQ8ND94 238 aa13.26□□□□□ -0.29
ERBB2-218ENST00000584450 MRPL44Q9H9J2 332 aaKnown RBP13.26□□□□□ -0.29
ERBB2-218ENST00000584450 PANK4Q9NVE7 773 aa13.26□□□□□ -0.29
ERBB2-218ENST00000584450 CDC23Q9UJX2 597 aa13.26□□□□□ -0.29
ERBB2-218ENST00000584450 HPSEQ9Y251 543 aa13.26□□□□□ -0.29
ERBB2-218ENST00000584450 TTC26A0AVF1 554 aa13.26□□□□□ -0.29
ERBB2-218ENST00000584450 FAM26FQ5R3K3 315 aa13.26□□□□□ -0.29
ERBB2-218ENST00000584450 KLHL7Q8IXQ5 586 aa13.26□□□□□ -0.29
ERBB2-218ENST00000584450 TRIM31Q9BZY9 425 aa13.26□□□□□ -0.29
ERBB2-218ENST00000584450 TRIM10Q9UDY6 481 aa13.26□□□□□ -0.29
ERBB2-218ENST00000584450 RWDD2AQ9UIY3 292 aa13.26□□□□□ -0.29
ERBB2-218ENST00000584450 SFI1A8K8P3 1242 aa13.25□□□□□ -0.29
ERBB2-218ENST00000584450 ZEB2O60315 1214 aa13.25□□□□□ -0.29
ERBB2-218ENST00000584450 AKR1B1P15121 316 aa13.25□□□□□ -0.29
ERBB2-218ENST00000584450 KLHL30Q0D2K2 578 aa13.25□□□□□ -0.29
ERBB2-218ENST00000584450 TC2NQ8N9U0 490 aa13.25□□□□□ -0.29
ERBB2-218ENST00000584450 LSM14BQ9BX40 385 aaKnown RBP13.25□□□□□ -0.29
ERBB2-218ENST00000584450 HDAC6Q9UBN7 1215 aa13.25□□□□□ -0.29
ERBB2-218ENST00000584450 DNM3Q9UQ16 869 aa13.25□□□□□ -0.29
ERBB2-218ENST00000584450 H0YIN7 160 aa13.25□□□□□ -0.29
ERBB2-218ENST00000584450 RASSF7Q02833 373 aa13.25□□□□□ -0.29
ERBB2-218ENST00000584450 SEC23AQ15436 765 aa13.25□□□□□ -0.29
ERBB2-218ENST00000584450 RAD9BQ6WBX8 426 aa13.25□□□□□ -0.29
ERBB2-218ENST00000584450 MYCT1Q8N699 235 aa13.25□□□□□ -0.29
ERBB2-218ENST00000584450 CTNNBL1Q8WYA6 563 aaPredicted RBP13.25□□□□□ -0.29
ERBB2-218ENST00000584450 PDE11AQ9HCR9 933 aa13.25□□□□□ -0.29
ERBB2-218ENST00000584450 CALCOCO1Q9P1Z2 691 aa13.25□□□□□ -0.29
ERBB2-218ENST00000584450 USP17L10C9JJH3 530 aa13.25□□□□□ -0.29
ERBB2-218ENST00000584450 PPIP5K2O43314 1243 aa13.25□□□□□ -0.29
ERBB2-218ENST00000584450 NDUFA10O95299 355 aa13.25□□□□□ -0.29
ERBB2-218ENST00000584450 PRKG1Q13976 671 aa13.25□□□□□ -0.29
ERBB2-218ENST00000584450 HS2ST1Q7LGA3 356 aa13.25□□□□□ -0.29
ERBB2-218ENST00000584450 ADGRG1Q9Y653 693 aa13.25□□□□□ -0.29
ERBB2-218ENST00000584450 A0A087X0B3 334 aa13.24□□□□□ -0.29
ERBB2-218ENST00000584450 TTLL1O95922 423 aa13.24□□□□□ -0.29
ERBB2-218ENST00000584450 PKN1Q16512 942 aa13.24□□□□□ -0.29
ERBB2-218ENST00000584450 SND1Q7KZF4 910 aaKnown RBP eCLIP13.24□□□□□ -0.295e-6■□□□□ 9.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms