RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 VAMP4O75379 141 aa6.74□□□□□ -1.33
COPS3-217ENST00000583160 PPM1BO75688 479 aa6.74□□□□□ -1.33
COPS3-217ENST00000583160 TBC1D8O95759 1140 aa6.74□□□□□ -1.33
COPS3-217ENST00000583160 ERCC5P28715 1186 aaPredicted RBP6.74□□□□□ -1.33
COPS3-217ENST00000583160 RAB3GAP1Q15042 981 aa6.74□□□□□ -1.33
COPS3-217ENST00000583160 KIAA1211LQ6NV74 962 aa6.74□□□□□ -1.33
COPS3-217ENST00000583160 VHLLQ6RSH7 139 aa6.74□□□□□ -1.33
COPS3-217ENST00000583160 ANAPC16Q96DE5 110 aa6.74□□□□□ -1.33
COPS3-217ENST00000583160 PTCHD1Q96NR3 888 aa6.74□□□□□ -1.33
COPS3-217ENST00000583160 MCMBPQ9BTE3 642 aa6.74□□□□□ -1.33
COPS3-217ENST00000583160 TNFRSF12AQ9NP84 129 aa6.74□□□□□ -1.33
COPS3-217ENST00000583160 CNOT6Q9ULM6 557 aaKnown RBP6.74□□□□□ -1.33
COPS3-217ENST00000583160 NUDT19A8MXV4 375 aa6.73□□□□□ -1.33
COPS3-217ENST00000583160 MSL3P1P0C860 447 aa6.73□□□□□ -1.33
COPS3-217ENST00000583160 DPY19L1Q2PZI1 675 aa6.73□□□□□ -1.33
COPS3-217ENST00000583160 OLFML2BQ68BL8 750 aa6.73□□□□□ -1.33
COPS3-217ENST00000583160 AMIGO3Q86WK7 504 aa6.73□□□□□ -1.33
COPS3-217ENST00000583160 IRF2BPLQ9H1B7 796 aa6.73□□□□□ -1.33
COPS3-217ENST00000583160 CNTD2Q9H8S5 307 aa6.73□□□□□ -1.33
COPS3-217ENST00000583160 CAPN10Q9HC96 672 aa6.73□□□□□ -1.33
COPS3-217ENST00000583160 SUSD2Q9UGT4 822 aa6.73□□□□□ -1.33
COPS3-217ENST00000583160 SUGT1Q9Y2Z0 365 aa6.73□□□□□ -1.33
COPS3-217ENST00000583160 ADAMTS20P59510 1910 aa6.73□□□□□ -1.33
COPS3-217ENST00000583160 TMEM62Q0P6H9 643 aa6.72□□□□□ -1.33
COPS3-217ENST00000583160 VPS37DQ86XT2 251 aa6.72□□□□□ -1.33
COPS3-217ENST00000583160 ARHGEF39Q8N4T4 335 aa6.72□□□□□ -1.33
COPS3-217ENST00000583160 RCC1LQ96I51 464 aaKnown RBP6.72□□□□□ -1.33
COPS3-217ENST00000583160 CGGBP1Q9UFW8 167 aaPredicted RBP6.72□□□□□ -1.33
COPS3-217ENST00000583160 KCTD3Q9Y597 815 aa6.72□□□□□ -1.33
COPS3-217ENST00000583160 A0A1W2PQJ5 194 aa6.71□□□□□ -1.34
COPS3-217ENST00000583160 ANKRD34BA5PLL1 514 aa6.71□□□□□ -1.34
COPS3-217ENST00000583160 STXBP3O00186 592 aa6.71□□□□□ -1.34
COPS3-217ENST00000583160 AURKAO14965 403 aa6.71□□□□□ -1.34
COPS3-217ENST00000583160 N4BP3O15049 544 aa6.71□□□□□ -1.34
COPS3-217ENST00000583160 TCF3P15923 654 aa6.71□□□□□ -1.34
COPS3-217ENST00000583160 L1CAMP32004 1257 aa6.71□□□□□ -1.34
COPS3-217ENST00000583160 EPHB3P54753 998 aa6.71□□□□□ -1.34
COPS3-217ENST00000583160 AMPD2Q01433 879 aa6.71□□□□□ -1.34
COPS3-217ENST00000583160 SSPNQ14714 243 aa6.71□□□□□ -1.34
COPS3-217ENST00000583160 CBX2Q14781 532 aaPredicted RBP6.71□□□□□ -1.34
COPS3-217ENST00000583160 ZNF385BQ569K4 471 aa6.71□□□□□ -1.34
COPS3-217ENST00000583160 EEF1DP3Q658K8 133 aa6.71□□□□□ -1.34
COPS3-217ENST00000583160 RCSD1Q6JBY9 416 aa6.71□□□□□ -1.34
COPS3-217ENST00000583160 TMC6Q7Z403 805 aa6.71□□□□□ -1.34
COPS3-217ENST00000583160 ZNF428Q96B54 188 aa6.71□□□□□ -1.34
COPS3-217ENST00000583160 MRVI1Q9Y6F6 885 aa6.71□□□□□ -1.34
COPS3-217ENST00000583160 CDR1P51861 262 aa6.7□□□□□ -1.34
COPS3-217ENST00000583160 NR1I3Q14994 352 aa6.7□□□□□ -1.34
COPS3-217ENST00000583160 RPTNQ6XPR3 784 aa6.7□□□□□ -1.34
COPS3-217ENST00000583160 NLGN2Q8NFZ4 835 aa6.7□□□□□ -1.34
COPS3-217ENST00000583160 SIGLEC10Q96LC7 697 aa6.7□□□□□ -1.34
COPS3-217ENST00000583160 APBA2Q99767 749 aa6.7□□□□□ -1.34
COPS3-217ENST00000583160 PDLIM7Q9NR12 457 aa6.7□□□□□ -1.34
COPS3-217ENST00000583160 AKT3Q9Y243 479 aa6.7□□□□□ -1.34
COPS3-217ENST00000583160 IRAK3Q9Y616 596 aa6.7□□□□□ -1.34
COPS3-217ENST00000583160 C2orf71A6NGG8 1288 aa6.69□□□□□ -1.34
COPS3-217ENST00000583160 SSBP05455 408 aaKnown RBP eCLIP6.69□□□□□ -1.34
COPS3-217ENST00000583160 TACR1P25103 407 aa6.69□□□□□ -1.34
COPS3-217ENST00000583160 SEPHS1P49903 392 aa6.69□□□□□ -1.34
COPS3-217ENST00000583160 GRB10Q13322 594 aa6.69□□□□□ -1.34
COPS3-217ENST00000583160 BICRALQ6AI39 1079 aa6.69□□□□□ -1.34
COPS3-217ENST00000583160 LDHDQ86WU2 507 aa6.69□□□□□ -1.34
COPS3-217ENST00000583160 ZNF513Q8N8E2 541 aaPredicted RBP6.69□□□□□ -1.34
COPS3-217ENST00000583160 PANK1Q8TE04 598 aa6.69□□□□□ -1.34
COPS3-217ENST00000583160 MZB1Q8WU39 189 aa6.69□□□□□ -1.34
COPS3-217ENST00000583160 APEX2Q9UBZ4 518 aa6.69□□□□□ -1.34
COPS3-217ENST00000583160 BACE2Q9Y5Z0 518 aa6.69□□□□□ -1.34
COPS3-217ENST00000583160 RFXAPO00287 272 aa6.68□□□□□ -1.34
COPS3-217ENST00000583160 SMAD7O15105 426 aaKnown RBP6.68□□□□□ -1.34
COPS3-217ENST00000583160 DBHP09172 617 aa6.68□□□□□ -1.34
COPS3-217ENST00000583160 PI3P19957 117 aa6.68□□□□□ -1.34
COPS3-217ENST00000583160 MAPKAPK2P49137 400 aa6.68□□□□□ -1.34
COPS3-217ENST00000583160 CORO7P57737 925 aa6.68□□□□□ -1.34
COPS3-217ENST00000583160 GNL2Q13823 731 aaKnown RBP6.68□□□□□ -1.34
COPS3-217ENST00000583160 NCAPHQ15003 741 aa6.68□□□□□ -1.34
COPS3-217ENST00000583160 ZC3H14Q6PJT7 736 aaKnown RBP6.68□□□□□ -1.34
COPS3-217ENST00000583160 PAQR3Q6TCH7 311 aa6.68□□□□□ -1.34
COPS3-217ENST00000583160 IRS4O14654 1257 aaPredicted RBP6.67□□□□□ -1.34
COPS3-217ENST00000583160 SRGAP3O43295 1099 aa6.67□□□□□ -1.34
COPS3-217ENST00000583160 KCNH1O95259 989 aa6.67□□□□□ -1.34
COPS3-217ENST00000583160 CYBBP04839 570 aa6.67□□□□□ -1.34
COPS3-217ENST00000583160 ZNF143P52747 638 aaPredicted RBP6.67□□□□□ -1.34
COPS3-217ENST00000583160 NCKAP1LP55160 1127 aa6.67□□□□□ -1.34
COPS3-217ENST00000583160 PLEKHN1Q494U1 663 aaPredicted RBP6.67□□□□□ -1.34
COPS3-217ENST00000583160 CPNE8Q86YQ8 564 aa6.67□□□□□ -1.34
COPS3-217ENST00000583160 BVESQ8NE79 360 aa6.67□□□□□ -1.34
COPS3-217ENST00000583160 ACTR10Q9NZ32 417 aa6.67□□□□□ -1.34
COPS3-217ENST00000583160 EMC9Q9Y3B6 208 aa6.67□□□□□ -1.34
COPS3-217ENST00000583160 PCDHA5Q9Y5H7 936 aa6.67□□□□□ -1.34
COPS3-217ENST00000583160 F8W031 263 aaPredicted RBP6.66□□□□□ -1.34
COPS3-217ENST00000583160 NOP56O00567 594 aaKnown RBP6.66□□□□□ -1.34
COPS3-217ENST00000583160 NAT2P11245 290 aa6.66□□□□□ -1.34
COPS3-217ENST00000583160 ETFBP38117 255 aa6.66□□□□□ -1.34
COPS3-217ENST00000583160 TNNI3KQ59H18 835 aa6.66□□□□□ -1.34
COPS3-217ENST00000583160 TCERG1LQ5VWI1 586 aa6.66□□□□□ -1.34
COPS3-217ENST00000583160 IGDCC3Q8IVU1 814 aa6.66□□□□□ -1.34
COPS3-217ENST00000583160 TMEFF1Q8IYR6 380 aa6.66□□□□□ -1.34
COPS3-217ENST00000583160 CRACR2BQ8N4Y2 399 aaPredicted RBP6.66□□□□□ -1.34
COPS3-217ENST00000583160 PPP1R14AQ96A00 147 aa6.66□□□□□ -1.34
COPS3-217ENST00000583160 EPB41L4AQ9HCS5 686 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms