RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 CAP2P40123 477 aa16.63■□□□□ 0.25
MKS1-211ENST00000581761 ECE1P42892 770 aa16.63■□□□□ 0.25
MKS1-211ENST00000581761 ZNF165P49910 485 aa16.63■□□□□ 0.25
MKS1-211ENST00000581761 MAP3K10Q02779 954 aa16.63■□□□□ 0.25
MKS1-211ENST00000581761 LONRF3Q496Y0 759 aa16.63■□□□□ 0.25
MKS1-211ENST00000581761 ARL6IP4Q66PJ3 421 aaKnown RBP16.63■□□□□ 0.25
MKS1-211ENST00000581761 SULF1Q8IWU6 871 aa16.63■□□□□ 0.25
MKS1-211ENST00000581761 ELOA2Q8IYF1 753 aaPredicted RBP16.63■□□□□ 0.25
MKS1-211ENST00000581761 C4orf32Q8N8J7 132 aa16.63■□□□□ 0.25
MKS1-211ENST00000581761 ACER1Q8TDN7 264 aa16.63■□□□□ 0.25
MKS1-211ENST00000581761 SYMPKQ92797 1274 aaKnown RBP16.63■□□□□ 0.25
MKS1-211ENST00000581761 CUL5Q93034 780 aa16.63■□□□□ 0.25
MKS1-211ENST00000581761 USP25Q9UHP3 1055 aa16.63■□□□□ 0.25
MKS1-211ENST00000581761 HOOK1Q9UJC3 728 aaKnown RBP16.63■□□□□ 0.25
MKS1-211ENST00000581761 A0A087WWV3 80 aa16.62■□□□□ 0.25
MKS1-211ENST00000581761 NLRP12P59046 1061 aa16.62■□□□□ 0.25
MKS1-211ENST00000581761 PNOCQ13519 176 aa16.62■□□□□ 0.25
MKS1-211ENST00000581761 LETM2Q2VYF4 491 aa16.62■□□□□ 0.25
MKS1-211ENST00000581761 DEFB115Q30KQ5 88 aa16.62■□□□□ 0.25
MKS1-211ENST00000581761 USP49Q70CQ1 688 aa16.62■□□□□ 0.25
MKS1-211ENST00000581761 NEK8Q86SG6 692 aa16.62■□□□□ 0.25
MKS1-211ENST00000581761 LUZP1Q86V48 1076 aa16.62■□□□□ 0.25
MKS1-211ENST00000581761 CEP57L1Q8IYX8 460 aa16.62■□□□□ 0.25
MKS1-211ENST00000581761 TBCKQ8TEA7 893 aa16.62■□□□□ 0.25
MKS1-211ENST00000581761 TRIM44Q96DX7 344 aaPredicted RBP16.62■□□□□ 0.25
MKS1-211ENST00000581761 PDLIM2Q96JY6 352 aa16.62■□□□□ 0.25
MKS1-211ENST00000581761 SH2D4AQ9H788 454 aa16.62■□□□□ 0.25
MKS1-211ENST00000581761 TMX2Q9Y320 296 aa16.62■□□□□ 0.25
MKS1-211ENST00000581761 CELF2O95319 508 aaKnown RBP16.61■□□□□ 0.25
MKS1-211ENST00000581761 VEGFBP49765 207 aa16.61■□□□□ 0.25
MKS1-211ENST00000581761 MRPL12P52815 198 aaKnown RBP16.61■□□□□ 0.25
MKS1-211ENST00000581761 UBE2SQ16763 222 aa16.61■□□□□ 0.25
MKS1-211ENST00000581761 KANK3Q6NY19 840 aa16.61■□□□□ 0.25
MKS1-211ENST00000581761 BTNL9Q6UXG8 535 aa16.61■□□□□ 0.25
MKS1-211ENST00000581761 SPICE1Q8N0Z3 855 aa16.61■□□□□ 0.25
MKS1-211ENST00000581761 PDILTQ8N807 584 aa16.61■□□□□ 0.25
MKS1-211ENST00000581761 CDCA5Q96FF9 252 aa16.61■□□□□ 0.25
MKS1-211ENST00000581761 EPSTI1Q96J88 318 aa16.61■□□□□ 0.25
MKS1-211ENST00000581761 TEPSINQ96N21 525 aa16.61■□□□□ 0.25
MKS1-211ENST00000581761 GLT8D2Q9H1C3 349 aa16.61■□□□□ 0.25
MKS1-211ENST00000581761 BIN1O00499 593 aa16.6■□□□□ 0.25
MKS1-211ENST00000581761 LAD1O00515 517 aa16.6■□□□□ 0.25
MKS1-211ENST00000581761 ACTN4O43707 911 aaKnown RBP16.6■□□□□ 0.25
MKS1-211ENST00000581761 CCNT1O60563 726 aaKnown RBP16.6■□□□□ 0.25
MKS1-211ENST00000581761 ASNSP08243 561 aa16.6■□□□□ 0.25
MKS1-211ENST00000581761 LONP1P36776 959 aaKnown RBP16.6■□□□□ 0.25
MKS1-211ENST00000581761 SNAP25P60880 206 aa16.6■□□□□ 0.25
MKS1-211ENST00000581761 PLCB2Q00722 1185 aa16.6■□□□□ 0.25
MKS1-211ENST00000581761 ORC2Q13416 577 aaPredicted RBP16.6■□□□□ 0.25
MKS1-211ENST00000581761 IL17AQ16552 155 aa16.6■□□□□ 0.25
MKS1-211ENST00000581761 DTHD1Q6ZMT9 781 aa16.6■□□□□ 0.25
MKS1-211ENST00000581761 FBXO11Q86XK2 927 aa16.6■□□□□ 0.25
MKS1-211ENST00000581761 DHX58Q96C10 678 aa16.6■□□□□ 0.25
MKS1-211ENST00000581761 CCDC34Q96HJ3 373 aa16.6■□□□□ 0.25
MKS1-211ENST00000581761 NAT10Q9H0A0 1025 aaKnown RBP16.6■□□□□ 0.25
MKS1-211ENST00000581761 DEFB129Q9H1M3 183 aa16.6■□□□□ 0.25
MKS1-211ENST00000581761 TMEM60Q9H2L4 133 aa16.6■□□□□ 0.25
MKS1-211ENST00000581761 VCPKMTQ9H867 229 aa16.6■□□□□ 0.25
MKS1-211ENST00000581761 PSTPIP2Q9H939 334 aa16.6■□□□□ 0.25
MKS1-211ENST00000581761 ZNF408Q9H9D4 720 aa16.6■□□□□ 0.25
MKS1-211ENST00000581761 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.6■□□□□ 0.25
MKS1-211ENST00000581761 TUBE1Q9UJT0 475 aa16.6■□□□□ 0.25
MKS1-211ENST00000581761 PCDHA1Q9Y5I3 950 aa16.6■□□□□ 0.25
MKS1-211ENST00000581761 RASSF10A6NK89 507 aa16.59■□□□□ 0.25
MKS1-211ENST00000581761 FOXN1O15353 648 aa16.59■□□□□ 0.25
MKS1-211ENST00000581761 ADCY5O95622 1261 aa16.59■□□□□ 0.25
MKS1-211ENST00000581761 OR52Z1P0C646 297 aa16.59■□□□□ 0.25
MKS1-211ENST00000581761 HSPA1AP0DMV8 641 aaKnown RBP16.59■□□□□ 0.25
MKS1-211ENST00000581761 HSPA1BP0DMV9 641 aaKnown RBP16.59■□□□□ 0.25
MKS1-211ENST00000581761 TXLNAP40222 546 aa16.59■□□□□ 0.25
MKS1-211ENST00000581761 POSTNQ15063 836 aa16.59■□□□□ 0.25
MKS1-211ENST00000581761 KIAA1755Q5JYT7 1200 aa16.59■□□□□ 0.25
MKS1-211ENST00000581761 FAM83BQ5T0W9 1011 aa16.59■□□□□ 0.25
MKS1-211ENST00000581761 APOBEC3FQ8IUX4 373 aaKnown RBP16.59■□□□□ 0.25
MKS1-211ENST00000581761 PYM1Q9BRP8 204 aaKnown RBP16.59■□□□□ 0.25
MKS1-211ENST00000581761 AMNQ9BXJ7 453 aa16.59■□□□□ 0.25
MKS1-211ENST00000581761 GINM1Q9NU53 330 aa16.59■□□□□ 0.25
MKS1-211ENST00000581761 TRPM7Q96QT4 1865 aa16.59■□□□□ 0.25
MKS1-211ENST00000581761 A0A087X0B3 334 aa16.58■□□□□ 0.24
MKS1-211ENST00000581761 PHF20L1A8MW92 1017 aa16.58■□□□□ 0.24
MKS1-211ENST00000581761 BECN2A8MW95 431 aa16.58■□□□□ 0.24
MKS1-211ENST00000581761 GOLGA6L19H0YKK7 550 aa16.58■□□□□ 0.24
MKS1-211ENST00000581761 NEMFO60524 1076 aa16.58■□□□□ 0.24
MKS1-211ENST00000581761 PRR29P0C7W0 189 aa16.58■□□□□ 0.24
MKS1-211ENST00000581761 PRPHP41219 470 aa16.58■□□□□ 0.24
MKS1-211ENST00000581761 CLK2P49760 499 aaKnown RBP16.58■□□□□ 0.24
MKS1-211ENST00000581761 IQCB1Q15051 598 aa16.58■□□□□ 0.24
MKS1-211ENST00000581761 ZYXQ15942 572 aaKnown RBP16.58■□□□□ 0.24
MKS1-211ENST00000581761 PAXIP1Q6ZW49 1069 aaPredicted RBP16.58■□□□□ 0.24
MKS1-211ENST00000581761 CCDC84Q86UT8 332 aaPredicted RBP16.58■□□□□ 0.24
MKS1-211ENST00000581761 PRR12Q9ULL5 1215 aa16.58■□□□□ 0.24
MKS1-211ENST00000581761 STAT2P52630 851 aa16.57■□□□□ 0.24
MKS1-211ENST00000581761 MDM2Q00987 491 aaPredicted RBP16.57■□□□□ 0.24
MKS1-211ENST00000581761 GRM1Q13255 1194 aa16.57■□□□□ 0.24
MKS1-211ENST00000581761 DPCR1Q3MIW9 517 aa16.57■□□□□ 0.24
MKS1-211ENST00000581761 NBPF12Q5TAG4 269 aaPredicted RBP16.57■□□□□ 0.24
MKS1-211ENST00000581761 DCAF15Q66K64 600 aa16.57■□□□□ 0.24
MKS1-211ENST00000581761 SAPCD2Q86UD0 394 aa16.57■□□□□ 0.24
MKS1-211ENST00000581761 GRAMD1CQ8IYS0 662 aa16.57■□□□□ 0.24
MKS1-211ENST00000581761 CHURC1Q8WUH1 139 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms