RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 FCRL2Q96LA5 508 aaPredicted RBP7.08□□□□□ -1.28
SMCHD1-205ENST00000581383 SRPK1Q96SB4 655 aaKnown RBP7.08□□□□□ -1.28
SMCHD1-205ENST00000581383 KRTAP9-3Q9BYQ3 159 aa7.08□□□□□ -1.28
SMCHD1-205ENST00000581383 CRTAC1Q9NQ79 661 aa7.08□□□□□ -1.28
SMCHD1-205ENST00000581383 TNFRSF10DQ9UBN6 386 aa7.08□□□□□ -1.28
SMCHD1-205ENST00000581383 MINPP1Q9UNW1 487 aa7.08□□□□□ -1.28
SMCHD1-205ENST00000581383 SLC12A7Q9Y666 1083 aa7.08□□□□□ -1.28
SMCHD1-205ENST00000581383 ABLIM1O14639 778 aa7.07□□□□□ -1.28
SMCHD1-205ENST00000581383 TMEM62Q0P6H9 643 aa7.07□□□□□ -1.28
SMCHD1-205ENST00000581383 DDR2Q16832 855 aa7.07□□□□□ -1.28
SMCHD1-205ENST00000581383 C6orf15Q6UXA7 325 aaPredicted RBP7.07□□□□□ -1.28
SMCHD1-205ENST00000581383 JAMLQ86YT9 394 aa7.07□□□□□ -1.28
SMCHD1-205ENST00000581383 TMEM192Q8IY95 271 aa7.07□□□□□ -1.28
SMCHD1-205ENST00000581383 HHIPL1Q96JK4 782 aa7.07□□□□□ -1.28
SMCHD1-205ENST00000581383 G6PC3Q9BUM1 346 aa7.07□□□□□ -1.28
SMCHD1-205ENST00000581383 CDK11AQ9UQ88 783 aaPredicted RBP7.07□□□□□ -1.28
SMCHD1-205ENST00000581383 GPR55Q9Y2T6 319 aaPredicted RBP7.07□□□□□ -1.28
SMCHD1-205ENST00000581383 B2RBV5 119 aa7.06□□□□□ -1.28
SMCHD1-205ENST00000581383 GJB6O95452 261 aa7.06□□□□□ -1.28
SMCHD1-205ENST00000581383 PNLIPP16233 465 aa7.06□□□□□ -1.28
SMCHD1-205ENST00000581383 CYP4F8P98187 520 aa7.06□□□□□ -1.28
SMCHD1-205ENST00000581383 AUHQ13825 339 aaKnown RBP7.06□□□□□ -1.28
SMCHD1-205ENST00000581383 RAB3GAP1Q15042 981 aa7.06□□□□□ -1.28
SMCHD1-205ENST00000581383 NFE2L2Q16236 605 aa7.06□□□□□ -1.28
SMCHD1-205ENST00000581383 GNPTABQ3T906 1256 aa7.06□□□□□ -1.28
SMCHD1-205ENST00000581383 FAM178BQ8IXR5 827 aa7.06□□□□□ -1.28
SMCHD1-205ENST00000581383 NUP43Q8NFH3 380 aa7.06□□□□□ -1.28
SMCHD1-205ENST00000581383 PHAXQ9H814 394 aaKnown RBP7.06□□□□□ -1.28
SMCHD1-205ENST00000581383 FAM86C1Q9NVL1 165 aa7.06□□□□□ -1.28
SMCHD1-205ENST00000581383 ZNF214Q9UL59 606 aaPredicted RBP7.06□□□□□ -1.28
SMCHD1-205ENST00000581383 TMEM82A0PJX8 343 aa7.05□□□□□ -1.28
SMCHD1-205ENST00000581383 FAM221BA6H8Z2 402 aa7.05□□□□□ -1.28
SMCHD1-205ENST00000581383 NUDT19A8MXV4 375 aa7.05□□□□□ -1.28
SMCHD1-205ENST00000581383 PRKCAP17252 672 aa7.05□□□□□ -1.28
SMCHD1-205ENST00000581383 LAPTM5Q13571 262 aa7.05□□□□□ -1.28
SMCHD1-205ENST00000581383 BBS9Q3SYG4 887 aa7.05□□□□□ -1.28
SMCHD1-205ENST00000581383 GIMAP6Q6P9H5 292 aa7.05□□□□□ -1.28
SMCHD1-205ENST00000581383 VHLLQ6RSH7 139 aa7.05□□□□□ -1.28
SMCHD1-205ENST00000581383 NOP9Q86U38 636 aaKnown RBP7.05□□□□□ -1.28
SMCHD1-205ENST00000581383 MKL1Q969V6 931 aa7.05□□□□□ -1.28
SMCHD1-205ENST00000581383 SHISA4Q96DD7 197 aa7.05□□□□□ -1.28
SMCHD1-205ENST00000581383 SIGLEC10Q96LC7 697 aa7.05□□□□□ -1.28
SMCHD1-205ENST00000581383 B8ZZF3 427 aa7.04□□□□□ -1.28
SMCHD1-205ENST00000581383 TP53P04637 393 aaPredicted RBP7.04□□□□□ -1.28
SMCHD1-205ENST00000581383 GSTM1P09488 218 aa7.04□□□□□ -1.28
SMCHD1-205ENST00000581383 PI3P19957 117 aa7.04□□□□□ -1.28
SMCHD1-205ENST00000581383 VIPR1P32241 457 aa7.04□□□□□ -1.28
SMCHD1-205ENST00000581383 SLC7A5Q01650 507 aa7.04□□□□□ -1.28
SMCHD1-205ENST00000581383 KIAA1211LQ6NV74 962 aa7.04□□□□□ -1.28
SMCHD1-205ENST00000581383 CRTC3Q6UUV7 619 aa7.04□□□□□ -1.28
SMCHD1-205ENST00000581383 TTLL10Q6ZVT0 673 aa7.04□□□□□ -1.28
SMCHD1-205ENST00000581383 MRFAP1L1Q96HT8 127 aa7.04□□□□□ -1.28
SMCHD1-205ENST00000581383 DEPDC7Q96QD5 511 aa7.04□□□□□ -1.28
SMCHD1-205ENST00000581383 CCDC113Q9H0I3 377 aa7.04□□□□□ -1.28
SMCHD1-205ENST00000581383 AP5S1Q9NUS5 200 aa7.04□□□□□ -1.28
SMCHD1-205ENST00000581383 SNTG2Q9NY99 539 aa7.04□□□□□ -1.28
SMCHD1-205ENST00000581383 SUCOQ9UBS9 1254 aaKnown RBP7.04□□□□□ -1.28
SMCHD1-205ENST00000581383 SMARCA5O60264 1052 aaPredicted RBP7.03□□□□□ -1.28
SMCHD1-205ENST00000581383 SASH1O94885 1247 aa7.03□□□□□ -1.28
SMCHD1-205ENST00000581383 GSNP06396 782 aa7.03□□□□□ -1.28
SMCHD1-205ENST00000581383 BMP8BP34820 402 aa7.03□□□□□ -1.28
SMCHD1-205ENST00000581383 PMS1P54277 932 aaKnown RBP7.03□□□□□ -1.28
SMCHD1-205ENST00000581383 NCAPHQ15003 741 aa7.03□□□□□ -1.28
SMCHD1-205ENST00000581383 HSF5Q4G112 596 aaPredicted RBP7.03□□□□□ -1.28
SMCHD1-205ENST00000581383 TDRD10Q5VZ19 366 aaKnown RBP7.03□□□□□ -1.28
SMCHD1-205ENST00000581383 TMC6Q7Z403 805 aa7.03□□□□□ -1.28
SMCHD1-205ENST00000581383 PPFIBP1Q86W92 1011 aa7.03□□□□□ -1.28
SMCHD1-205ENST00000581383 C7orf61Q8IZ16 206 aa7.03□□□□□ -1.28
SMCHD1-205ENST00000581383 PLCD4Q9BRC7 762 aa7.03□□□□□ -1.28
SMCHD1-205ENST00000581383 MSRB2Q9Y3D2 182 aa7.03□□□□□ -1.28
SMCHD1-205ENST00000581383 A0A1W2PQ45 241 aaPredicted RBP7.02□□□□□ -1.29
SMCHD1-205ENST00000581383 A0A1W2PQY0 241 aa7.02□□□□□ -1.29
SMCHD1-205ENST00000581383 C9IYK1 514 aa7.02□□□□□ -1.29
SMCHD1-205ENST00000581383 PDPK1O15530 556 aa7.02□□□□□ -1.29
SMCHD1-205ENST00000581383 VAV1P15498 845 aa7.02□□□□□ -1.29
SMCHD1-205ENST00000581383 NOP2P46087 812 aaKnown RBP7.02□□□□□ -1.29
SMCHD1-205ENST00000581383 RASA3Q14644 834 aa7.02□□□□□ -1.29
SMCHD1-205ENST00000581383 SSPNQ14714 243 aa7.02□□□□□ -1.29
SMCHD1-205ENST00000581383 MRM1Q6IN84 353 aaKnown RBP7.02□□□□□ -1.29
SMCHD1-205ENST00000581383 KLHL6Q8WZ60 621 aa7.02□□□□□ -1.29
SMCHD1-205ENST00000581383 PARD6AQ9NPB6 346 aa7.02□□□□□ -1.29
SMCHD1-205ENST00000581383 MBD1Q9UIS9 605 aaPredicted RBP7.02□□□□□ -1.29
SMCHD1-205ENST00000581383 ZNF281Q9Y2X9 895 aa7.02□□□□□ -1.29
SMCHD1-205ENST00000581383 NOTOA8MTQ0 251 aa7.01□□□□□ -1.29
SMCHD1-205ENST00000581383 FADS2P1A8MWK0 482 aa7.01□□□□□ -1.29
SMCHD1-205ENST00000581383 N4BP3O15049 544 aa7.01□□□□□ -1.29
SMCHD1-205ENST00000581383 AFF3P51826 1226 aaKnown RBP7.01□□□□□ -1.29
SMCHD1-205ENST00000581383 HLA-DQA1Q5Y7H0 255 aa7.01□□□□□ -1.29
SMCHD1-205ENST00000581383 LRP10Q7Z4F1 713 aa7.01□□□□□ -1.29
SMCHD1-205ENST00000581383 DNAJC7Q99615 494 aa7.01□□□□□ -1.29
SMCHD1-205ENST00000581383 GCM1Q9NP62 436 aa7.01□□□□□ -1.29
SMCHD1-205ENST00000581383 ERVK13-1Q9NX77 482 aa7.01□□□□□ -1.29
SMCHD1-205ENST00000581383 IMPACTQ9P2X3 320 aa7.01□□□□□ -1.29
SMCHD1-205ENST00000581383 DBR1Q9UK59 544 aaKnown RBP7.01□□□□□ -1.29
SMCHD1-205ENST00000581383 HRKO00198 91 aa7□□□□□ -1.29
SMCHD1-205ENST00000581383 ZNF205O95201 554 aa7□□□□□ -1.29
SMCHD1-205ENST00000581383 EPHB3P54753 998 aa7□□□□□ -1.29
SMCHD1-205ENST00000581383 KIR3DS1Q14943 382 aa7□□□□□ -1.29
SMCHD1-205ENST00000581383 TCEAL1Q15170 157 aa7□□□□□ -1.29
SMCHD1-205ENST00000581383 AXDND1Q5T1B0 1012 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms