RNA–Protein interactions for RNA: ENST00000581224.5

TRIM16-222, Transcript of tripartite motif containing 16, human

TSL 3

Gene TRIM16, Length 815 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-222	ENST00000581224	CCNT1	O60563	726 aa	Known RBP	11.24	□□□□□ -0.61
TRIM16-222	ENST00000581224	GDF11	O95390	407 aa		11.24	□□□□□ -0.61
TRIM16-222	ENST00000581224	ADCY5	O95622	1261 aa		11.24	□□□□□ -0.61
TRIM16-222	ENST00000581224	NDUFB10	O96000	172 aa		11.24	□□□□□ -0.61
TRIM16-222	ENST00000581224	OR52Z1	P0C646	297 aa		11.24	□□□□□ -0.61
TRIM16-222	ENST00000581224	PPP1R2	P41236	205 aa		11.24	□□□□□ -0.61
TRIM16-222	ENST00000581224	AMPD3	Q01432	767 aa		11.24	□□□□□ -0.61
TRIM16-222	ENST00000581224	RASA3	Q14644	834 aa		11.24	□□□□□ -0.61
TRIM16-222	ENST00000581224	INF2	Q27J81	1249 aa		11.24	□□□□□ -0.61
TRIM16-222	ENST00000581224	SLC35G1	Q2M3R5	365 aa		11.24	□□□□□ -0.61
TRIM16-222	ENST00000581224	LONRF3	Q496Y0	759 aa		11.24	□□□□□ -0.61
TRIM16-222	ENST00000581224	EAPP	Q56P03	285 aa	Predicted RBP	11.24	□□□□□ -0.61
TRIM16-222	ENST00000581224	KCTD1	Q719H9	257 aa		11.24	□□□□□ -0.61
TRIM16-222	ENST00000581224	VCPKMT	Q9H867	229 aa		11.24	□□□□□ -0.61
TRIM16-222	ENST00000581224	HACL1	Q9UJ83	578 aa		11.24	□□□□□ -0.61
TRIM16-222	ENST00000581224	FEM1B	Q9UK73	627 aa		11.24	□□□□□ -0.61
TRIM16-222	ENST00000581224	RABGAP1	Q9Y3P9	1069 aa		11.24	□□□□□ -0.61
TRIM16-222	ENST00000581224	USP17L10	C9JJH3	530 aa		11.23	□□□□□ -0.61
TRIM16-222	ENST00000581224	TMEM232	C9JQI7	657 aa		11.23	□□□□□ -0.61
TRIM16-222	ENST00000581224	TOMM70	O94826	608 aa		11.23	□□□□□ -0.61
TRIM16-222	ENST00000581224	MSN	P26038	577 aa	Known RBP	11.23	□□□□□ -0.61
TRIM16-222	ENST00000581224	CDC25B	P30305	580 aa		11.23	□□□□□ -0.61
TRIM16-222	ENST00000581224	GMPS	P49915	693 aa	Predicted RBP	11.23	□□□□□ -0.61
TRIM16-222	ENST00000581224	USP14	P54578	494 aa		11.23	□□□□□ -0.61
TRIM16-222	ENST00000581224	MDM2	Q00987	491 aa	Predicted RBP	11.23	□□□□□ -0.61
TRIM16-222	ENST00000581224	IQCB1	Q15051	598 aa		11.23	□□□□□ -0.61
TRIM16-222	ENST00000581224	CDC37	Q16543	378 aa	Predicted RBP	11.23	□□□□□ -0.61
TRIM16-222	ENST00000581224	LETM2	Q2VYF4	491 aa		11.23	□□□□□ -0.61
TRIM16-222	ENST00000581224	SUPT20HL1	Q3ZLR7	823 aa		11.23	□□□□□ -0.61
TRIM16-222	ENST00000581224	EARS2	Q5JPH6	523 aa	Known RBP	11.23	□□□□□ -0.61
TRIM16-222	ENST00000581224	TYW1B	Q6NUM6	668 aa		11.23	□□□□□ -0.61
TRIM16-222	ENST00000581224	SIAH1	Q8IUQ4	282 aa		11.23	□□□□□ -0.61
TRIM16-222	ENST00000581224	MICALL2	Q8IY33	904 aa		11.23	□□□□□ -0.61
TRIM16-222	ENST00000581224	KCTD17	Q8N5Z5	321 aa		11.23	□□□□□ -0.61
TRIM16-222	ENST00000581224	C4orf32	Q8N8J7	132 aa		11.23	□□□□□ -0.61
TRIM16-222	ENST00000581224	RASSF8	Q8NHQ8	419 aa		11.23	□□□□□ -0.61
TRIM16-222	ENST00000581224	TBCK	Q8TEA7	893 aa		11.23	□□□□□ -0.61
TRIM16-222	ENST00000581224	SYMPK	Q92797	1274 aa	Known RBP	11.23	□□□□□ -0.61
TRIM16-222	ENST00000581224	CALML4	Q96GE6	196 aa		11.23	□□□□□ -0.61
TRIM16-222	ENST00000581224	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.23	□□□□□ -0.61
TRIM16-222	ENST00000581224	MAF1	Q9H063	256 aa		11.23	□□□□□ -0.61
TRIM16-222	ENST00000581224	AS3MT	Q9HBK9	375 aa		11.23	□□□□□ -0.61
TRIM16-222	ENST00000581224	CLEC11A	Q9Y240	323 aa		11.23	□□□□□ -0.61
TRIM16-222	ENST00000581224	ATAD5	Q96QE3	1844 aa		11.23	□□□□□ -0.61
TRIM16-222	ENST00000581224	FAM205C	A6NFA0	338 aa		11.22	□□□□□ -0.61
TRIM16-222	ENST00000581224	FAM196B	A6NMK8	535 aa		11.22	□□□□□ -0.61
TRIM16-222	ENST00000581224	CBFA2T2	O43439	604 aa		11.22	□□□□□ -0.61
TRIM16-222	ENST00000581224	MARCH6	O60337	910 aa		11.22	□□□□□ -0.61
TRIM16-222	ENST00000581224	ERCC5	P28715	1186 aa	Predicted RBP	11.22	□□□□□ -0.61
TRIM16-222	ENST00000581224	EPHX2	P34913	555 aa		11.22	□□□□□ -0.61
TRIM16-222	ENST00000581224	CLK2	P49760	499 aa	Known RBP	11.22	□□□□□ -0.61
TRIM16-222	ENST00000581224	FXR2	P51116	673 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
TRIM16-222	ENST00000581224	PLCB2	Q00722	1185 aa		11.22	□□□□□ -0.61
TRIM16-222	ENST00000581224	QRICH1	Q2TAL8	776 aa		11.22	□□□□□ -0.61
TRIM16-222	ENST00000581224	KIF4B	Q2VIQ3	1234 aa		11.22	□□□□□ -0.61
TRIM16-222	ENST00000581224	NBPF9	Q3BBW0	867 aa		11.22	□□□□□ -0.61
TRIM16-222	ENST00000581224	RRAGB	Q5VZM2	374 aa		11.22	□□□□□ -0.61
TRIM16-222	ENST00000581224	ZSCAN30	Q86W11	494 aa		11.22	□□□□□ -0.61
TRIM16-222	ENST00000581224	SLFN12	Q8IYM2	578 aa		11.22	□□□□□ -0.61
TRIM16-222	ENST00000581224	SPATA20	Q8TB22	786 aa		11.22	□□□□□ -0.61
TRIM16-222	ENST00000581224	COA7	Q96BR5	231 aa		11.22	□□□□□ -0.61
TRIM16-222	ENST00000581224	MRFAP1L1	Q96HT8	127 aa		11.22	□□□□□ -0.61
TRIM16-222	ENST00000581224	ZNF341	Q9BYN7	854 aa		11.22	□□□□□ -0.61
TRIM16-222	ENST00000581224	PITPNM2	Q9BZ72	1349 aa		11.22	□□□□□ -0.61
TRIM16-222	ENST00000581224	TRIM5	Q9C035	493 aa		11.22	□□□□□ -0.61
TRIM16-222	ENST00000581224	TMEM39B	Q9GZU3	492 aa		11.22	□□□□□ -0.61
TRIM16-222	ENST00000581224	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.22	□□□□□ -0.61
TRIM16-222	ENST00000581224	MAP3K20	Q9NYL2	800 aa	Known RBP	11.22	□□□□□ -0.61
TRIM16-222	ENST00000581224	BIN2	Q9UBW5	565 aa	Predicted RBP	11.22	□□□□□ -0.61
TRIM16-222	ENST00000581224	SERTAD1	Q9UHV2	236 aa		11.22	□□□□□ -0.61
TRIM16-222	ENST00000581224	MRPL11	Q9Y3B7	192 aa	Known RBP	11.22	□□□□□ -0.61
TRIM16-222	ENST00000581224	SPDYE3	A6NKU9	549 aa		11.21	□□□□□ -0.61
TRIM16-222	ENST00000581224	ESPN	B1AK53	854 aa		11.21	□□□□□ -0.61
TRIM16-222	ENST00000581224	POTEC	B2RU33	542 aa		11.21	□□□□□ -0.61
TRIM16-222	ENST00000581224	PIK3CD	O00329	1044 aa		11.21	□□□□□ -0.61
TRIM16-222	ENST00000581224	TBX3	O15119	743 aa		11.21	□□□□□ -0.61
TRIM16-222	ENST00000581224	WDR46	O15213	610 aa	Known RBP	11.21	□□□□□ -0.61
TRIM16-222	ENST00000581224	ACTN4	O43707	911 aa	Known RBP	11.21	□□□□□ -0.61
TRIM16-222	ENST00000581224	SLC16A2	P36021	539 aa		11.21	□□□□□ -0.61
TRIM16-222	ENST00000581224	STAT6	P42226	847 aa		11.21	□□□□□ -0.61
TRIM16-222	ENST00000581224	SARS	P49591	514 aa	Known RBP	11.21	□□□□□ -0.61
TRIM16-222	ENST00000581224	MYL5	Q02045	173 aa		11.21	□□□□□ -0.61
TRIM16-222	ENST00000581224	CALCRL	Q16602	461 aa		11.21	□□□□□ -0.61
TRIM16-222	ENST00000581224	JAKMIP3	Q5VZ66	844 aa		11.21	□□□□□ -0.61
TRIM16-222	ENST00000581224	TTBK2	Q6IQ55	1244 aa		11.21	□□□□□ -0.61
TRIM16-222	ENST00000581224	SH3RF1	Q7Z6J0	888 aa		11.21	□□□□□ -0.61
TRIM16-222	ENST00000581224	LUZP1	Q86V48	1076 aa		11.21	□□□□□ -0.61
TRIM16-222	ENST00000581224	SMC1B	Q8NDV3	1235 aa		11.21	□□□□□ -0.61
TRIM16-222	ENST00000581224	RBM46	Q8TBY0	533 aa	Known RBP	11.21	□□□□□ -0.61
TRIM16-222	ENST00000581224	DHX58	Q96C10	678 aa		11.21	□□□□□ -0.61
TRIM16-222	ENST00000581224	FEZ1	Q99689	392 aa		11.21	□□□□□ -0.61
TRIM16-222	ENST00000581224	KIAA1683	Q9H0B3	1180 aa		11.21	□□□□□ -0.61
TRIM16-222	ENST00000581224	STK17A	Q9UEE5	414 aa		11.21	□□□□□ -0.61
TRIM16-222	ENST00000581224	PGAP2	Q9UHJ9	254 aa		11.21	□□□□□ -0.61
TRIM16-222	ENST00000581224	PCDHA5	Q9Y5H7	936 aa		11.21	□□□□□ -0.61
TRIM16-222	ENST00000581224	ABCB11	O95342	1321 aa		11.2	□□□□□ -0.62
TRIM16-222	ENST00000581224	CYP3A7-CYP3A51P	A0A087WV96	503 aa		11.2	□□□□□ -0.62
TRIM16-222	ENST00000581224	GTPBP6	O43824	516 aa	Predicted RBP	11.2	□□□□□ -0.62
TRIM16-222	ENST00000581224	NRDC	O43847	1150 aa		11.2	□□□□□ -0.62
TRIM16-222	ENST00000581224	POTEI	P0CG38	1075 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms