RNA–Protein interactions for RNA: ENST00000580745.5

PPP4R1-218, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-218ENST00000580745 BTNL9Q6UXG8 535 aa13.11□□□□□ -0.31
PPP4R1-218ENST00000580745 NOL8Q76FK4 1167 aaKnown RBP13.11□□□□□ -0.31
PPP4R1-218ENST00000580745 FBXO16Q8IX29 292 aaPredicted RBP13.11□□□□□ -0.31
PPP4R1-218ENST00000580745 FAM161BQ96MY7 647 aa13.11□□□□□ -0.31
PPP4R1-218ENST00000580745 TSEN34Q9BSV6 310 aaKnown RBP13.11□□□□□ -0.31
PPP4R1-218ENST00000580745 TCP11L1Q9NUJ3 509 aa13.11□□□□□ -0.31
PPP4R1-218ENST00000580745 MTMR10Q9NXD2 777 aa13.11□□□□□ -0.31
PPP4R1-218ENST00000580745 CYP39A1Q9NYL5 469 aa13.11□□□□□ -0.31
PPP4R1-218ENST00000580745 MYH8P13535 1937 aa13.11□□□□□ -0.31
PPP4R1-218ENST00000580745 ZMYM6O95789 1325 aa13.11□□□□□ -0.31
PPP4R1-218ENST00000580745 ASGR1P07306 291 aa13.1□□□□□ -0.31
PPP4R1-218ENST00000580745 SMPD1P17405 629 aa13.1□□□□□ -0.31
PPP4R1-218ENST00000580745 GJA9P57773 515 aa13.1□□□□□ -0.31
PPP4R1-218ENST00000580745 TNFAIP2Q03169 654 aa13.1□□□□□ -0.31
PPP4R1-218ENST00000580745 ZNF543Q08ER8 600 aa13.1□□□□□ -0.31
PPP4R1-218ENST00000580745 VTI1AQ96AJ9 217 aa13.1□□□□□ -0.31
PPP4R1-218ENST00000580745 UPF3AQ9H1J1 476 aaKnown RBP13.1□□□□□ -0.31
PPP4R1-218ENST00000580745 DIAPH3Q9NSV4 1193 aa13.1□□□□□ -0.31
PPP4R1-218ENST00000580745 TMEM39AQ9NV64 488 aa13.1□□□□□ -0.31
PPP4R1-218ENST00000580745 COL11A1P12107 1806 aaPredicted RBP13.1□□□□□ -0.31
PPP4R1-218ENST00000580745 FRMPD3Q5JV73 1810 aa13.09□□□□□ -0.31
PPP4R1-218ENST00000580745 MOXD2PA6NHM9 499 aa13.09□□□□□ -0.31
PPP4R1-218ENST00000580745 B4E1Z4 1266 aa13.09□□□□□ -0.31
PPP4R1-218ENST00000580745 ZNF213O14771 459 aa13.09□□□□□ -0.31
PPP4R1-218ENST00000580745 KIAA0355O15063 1070 aa13.09□□□□□ -0.31
PPP4R1-218ENST00000580745 KDM4AO75164 1064 aa13.09□□□□□ -0.31
PPP4R1-218ENST00000580745 CST5P28325 142 aaPredicted RBP13.09□□□□□ -0.31
PPP4R1-218ENST00000580745 GNASQ5JWF2 1037 aa13.09□□□□□ -0.31
PPP4R1-218ENST00000580745 TAPT1Q6NXT6 567 aa13.09□□□□□ -0.31
PPP4R1-218ENST00000580745 SLC30A10Q6XR72 485 aa13.09□□□□□ -0.31
PPP4R1-218ENST00000580745 TICAM2Q86XR7 235 aa13.09□□□□□ -0.31
PPP4R1-218ENST00000580745 CLEC4DQ8WXI8 215 aa13.09□□□□□ -0.31
PPP4R1-218ENST00000580745 UBA5Q9GZZ9 404 aa13.09□□□□□ -0.31
PPP4R1-218ENST00000580745 GNEQ9Y223 722 aaKnown RBP13.09□□□□□ -0.31
PPP4R1-218ENST00000580745 PTPDC1A2A3K4 754 aa13.08□□□□□ -0.32
PPP4R1-218ENST00000580745 ASB14A6NK59 587 aa13.08□□□□□ -0.32
PPP4R1-218ENST00000580745 DYNC1LI2O43237 492 aaPredicted RBP13.08□□□□□ -0.32
PPP4R1-218ENST00000580745 SNHG28P0DPA3 235 aa13.08□□□□□ -0.32
PPP4R1-218ENST00000580745 GSPT1P15170 499 aaKnown RBP13.08□□□□□ -0.32
PPP4R1-218ENST00000580745 RAG1P15918 1043 aa13.08□□□□□ -0.32
PPP4R1-218ENST00000580745 CDK7P50613 346 aa13.08□□□□□ -0.32
PPP4R1-218ENST00000580745 GPR153Q6NV75 609 aa13.08□□□□□ -0.32
PPP4R1-218ENST00000580745 CXCL17Q6UXB2 119 aa13.08□□□□□ -0.32
PPP4R1-218ENST00000580745 ANKRD33Q7Z3H0 272 aa13.08□□□□□ -0.32
PPP4R1-218ENST00000580745 NUP133Q8WUM0 1156 aa13.08□□□□□ -0.32
PPP4R1-218ENST00000580745 ESR2Q92731 530 aa13.08□□□□□ -0.32
PPP4R1-218ENST00000580745 GLT1D1Q96MS3 346 aa13.08□□□□□ -0.32
PPP4R1-218ENST00000580745 RNF41Q9H4P4 317 aaPredicted RBP13.08□□□□□ -0.32
PPP4R1-218ENST00000580745 SPC25Q9HBM1 224 aa13.08□□□□□ -0.32
PPP4R1-218ENST00000580745 DCDC2CA8MYV0 355 aa13.07□□□□□ -0.32
PPP4R1-218ENST00000580745 CALML3P27482 149 aa13.07□□□□□ -0.32
PPP4R1-218ENST00000580745 MFAP1P55081 439 aaKnown RBP13.07□□□□□ -0.32
PPP4R1-218ENST00000580745 TLK2Q86UE8 772 aa13.07□□□□□ -0.32
PPP4R1-218ENST00000580745 PCSK9Q8NBP7 692 aaKnown RBP13.07□□□□□ -0.32
PPP4R1-218ENST00000580745 TTC14Q96N46 770 aa13.07□□□□□ -0.32
PPP4R1-218ENST00000580745 TOX2Q96NM4 488 aa13.07□□□□□ -0.32
PPP4R1-218ENST00000580745 GUCD1Q96NT3 240 aa13.07□□□□□ -0.32
PPP4R1-218ENST00000580745 TBX21Q9UL17 535 aa13.07□□□□□ -0.32
PPP4R1-218ENST00000580745 ELP1O95163 1332 aa13.07□□□□□ -0.32
PPP4R1-218ENST00000580745 ARVCFO00192 962 aa13.06□□□□□ -0.32
PPP4R1-218ENST00000580745 ALDH5A1P51649 535 aaPredicted RBP13.06□□□□□ -0.32
PPP4R1-218ENST00000580745 PSMC6P62333 389 aa13.06□□□□□ -0.32
PPP4R1-218ENST00000580745 FSCN1Q16658 493 aaKnown RBP13.06□□□□□ -0.32
PPP4R1-218ENST00000580745 USH1GQ495M9 461 aa13.06□□□□□ -0.32
PPP4R1-218ENST00000580745 KIAA1211Q6ZU35 1233 aa13.06□□□□□ -0.32
PPP4R1-218ENST00000580745 SLC17A8Q8NDX2 589 aa13.06□□□□□ -0.32
PPP4R1-218ENST00000580745 MORC4Q8TE76 937 aa13.06□□□□□ -0.32
PPP4R1-218ENST00000580745 PPP1R13LQ8WUF5 828 aa13.06□□□□□ -0.32
PPP4R1-218ENST00000580745 TBC1D5Q92609 795 aa13.06□□□□□ -0.32
PPP4R1-218ENST00000580745 DSCC1Q9BVC3 393 aa13.06□□□□□ -0.32
PPP4R1-218ENST00000580745 PPP1R12CQ9BZL4 782 aa13.06□□□□□ -0.32
PPP4R1-218ENST00000580745 ZSWIM5Q9P217 1185 aa13.06□□□□□ -0.32
PPP4R1-218ENST00000580745 GRIN2DO15399 1336 aa13.06□□□□□ -0.32
PPP4R1-218ENST00000580745 A0A0U1RQG5 324 aaPredicted RBP13.05□□□□□ -0.32
PPP4R1-218ENST00000580745 TIMP1P01033 207 aa13.05□□□□□ -0.32
PPP4R1-218ENST00000580745 PCP11498 1178 aaKnown RBP13.05□□□□□ -0.32
PPP4R1-218ENST00000580745 RPS6P62753 249 aaKnown RBP13.05□□□□□ -0.32
PPP4R1-218ENST00000580745 NKX3-2P78367 333 aa13.05□□□□□ -0.32
PPP4R1-218ENST00000580745 FPGSQ05932 587 aa13.05□□□□□ -0.32
PPP4R1-218ENST00000580745 TTC22Q5TAA0 569 aa13.05□□□□□ -0.32
PPP4R1-218ENST00000580745 IQSEC1Q6DN90 963 aa13.05□□□□□ -0.32
PPP4R1-218ENST00000580745 RNF207Q6ZRF8 634 aa13.05□□□□□ -0.32
PPP4R1-218ENST00000580745 C16orf59Q7L2K0 433 aa13.05□□□□□ -0.32
PPP4R1-218ENST00000580745 DGKHQ86XP1 1220 aa13.05□□□□□ -0.32
PPP4R1-218ENST00000580745 FAM126BQ8IXS8 530 aa13.05□□□□□ -0.32
PPP4R1-218ENST00000580745 ENAHQ8N8S7 591 aaPredicted RBP13.05□□□□□ -0.32
PPP4R1-218ENST00000580745 PNMA1Q8ND90 353 aa13.05□□□□□ -0.32
PPP4R1-218ENST00000580745 RNPC3Q96LT9 517 aaKnown RBP13.05□□□□□ -0.32
PPP4R1-218ENST00000580745 ZSCAN10Q96SZ4 725 aaPredicted RBP13.05□□□□□ -0.32
PPP4R1-218ENST00000580745 AP5M1Q9H0R1 490 aa13.05□□□□□ -0.32
PPP4R1-218ENST00000580745 STXBP5LQ9Y2K9 1186 aa13.05□□□□□ -0.32
PPP4R1-218ENST00000580745 TAF6LQ9Y6J9 622 aa13.05□□□□□ -0.32
PPP4R1-218ENST00000580745 HIP1O00291 1037 aa13.04□□□□□ -0.32
PPP4R1-218ENST00000580745 ACRP10323 421 aa13.04□□□□□ -0.32
PPP4R1-218ENST00000580745 CDC37Q16543 378 aaPredicted RBP13.04□□□□□ -0.32
PPP4R1-218ENST00000580745 IMMTQ16891 758 aaKnown RBP13.04□□□□□ -0.32
PPP4R1-218ENST00000580745 FAM109BQ6ICB4 259 aaPredicted RBP13.04□□□□□ -0.32
PPP4R1-218ENST00000580745 CYB5R4Q7L1T6 521 aa13.04□□□□□ -0.32
PPP4R1-218ENST00000580745 IQCA1Q86XH1 822 aa13.04□□□□□ -0.32
PPP4R1-218ENST00000580745 ANKS1AQ92625 1134 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms