RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 ALAS1P13196 640 aa13.52□□□□□ -0.25
SNORD3C-201ENST00000580533 MRPL12P52815 198 aaKnown RBP13.52□□□□□ -0.25
SNORD3C-201ENST00000580533 USH1GQ495M9 461 aa13.52□□□□□ -0.25
SNORD3C-201ENST00000580533 NOM1Q5C9Z4 860 aaKnown RBP13.52□□□□□ -0.25
SNORD3C-201ENST00000580533 IFFO2Q5TF58 517 aa13.52□□□□□ -0.25
SNORD3C-201ENST00000580533 NCAPG2Q86XI2 1143 aa13.52□□□□□ -0.25
SNORD3C-201ENST00000580533 REPS2Q8NFH8 660 aa13.52□□□□□ -0.25
SNORD3C-201ENST00000580533 TRERF1Q96PN7 1200 aa13.52□□□□□ -0.25
SNORD3C-201ENST00000580533 ZIC5Q96T25 663 aa13.52□□□□□ -0.25
SNORD3C-201ENST00000580533 MPHOSPH6Q99547 160 aaKnown RBP13.52□□□□□ -0.25
SNORD3C-201ENST00000580533 RNF186Q9NXI6 227 aa13.52□□□□□ -0.25
SNORD3C-201ENST00000580533 RBPJLQ9UBG7 517 aa13.52□□□□□ -0.25
SNORD3C-201ENST00000580533 PFASO15067 1338 aa13.52□□□□□ -0.25
SNORD3C-201ENST00000580533 PARP14Q460N5 1801 aa13.52□□□□□ -0.25
SNORD3C-201ENST00000580533 ADGRA2Q96PE1 1338 aa13.51□□□□□ -0.25
SNORD3C-201ENST00000580533 ESYT2A0FGR8 921 aa13.51□□□□□ -0.25
SNORD3C-201ENST00000580533 STRNO43815 780 aa13.51□□□□□ -0.25
SNORD3C-201ENST00000580533 JAK2O60674 1132 aa13.51□□□□□ -0.25
SNORD3C-201ENST00000580533 TRPA1O75762 1119 aa13.51□□□□□ -0.25
SNORD3C-201ENST00000580533 BCRP11274 1271 aa13.51□□□□□ -0.25
SNORD3C-201ENST00000580533 SLC4A3P48751 1232 aa13.51□□□□□ -0.25
SNORD3C-201ENST00000580533 ADCY7P51828 1080 aa13.51□□□□□ -0.25
SNORD3C-201ENST00000580533 NLRP5P59047 1200 aa13.51□□□□□ -0.25
SNORD3C-201ENST00000580533 ST3GAL1Q11201 340 aa13.51□□□□□ -0.25
SNORD3C-201ENST00000580533 GNL2Q13823 731 aaKnown RBP13.51□□□□□ -0.25
SNORD3C-201ENST00000580533 KCTD2Q14681 263 aa13.51□□□□□ -0.25
SNORD3C-201ENST00000580533 WWC2Q6AWC2 1192 aa13.51□□□□□ -0.25
SNORD3C-201ENST00000580533 C17orf99Q6UX52 265 aa13.51□□□□□ -0.25
SNORD3C-201ENST00000580533 AGBL1Q96MI9 1066 aa13.51□□□□□ -0.25
SNORD3C-201ENST00000580533 EHMT1Q9H9B1 1298 aa13.51□□□□□ -0.25
SNORD3C-201ENST00000580533 RNF146Q9NTX7 359 aa13.51□□□□□ -0.25
SNORD3C-201ENST00000580533 SLC5A4Q9NY91 659 aa13.51□□□□□ -0.25
SNORD3C-201ENST00000580533 BTBD7Q9P203 1132 aa13.51□□□□□ -0.25
SNORD3C-201ENST00000580533 CPA4Q9UI42 421 aa13.51□□□□□ -0.25
SNORD3C-201ENST00000580533 ZNF536O15090 1300 aa13.5□□□□□ -0.25
SNORD3C-201ENST00000580533 hCG_1642624A0A1W2PR95 340 aa13.5□□□□□ -0.25
SNORD3C-201ENST00000580533 B4DLN1 442 aa13.5□□□□□ -0.25
SNORD3C-201ENST00000580533 STXBP3O00186 592 aa13.5□□□□□ -0.25
SNORD3C-201ENST00000580533 SNAP25P60880 206 aa13.5□□□□□ -0.25
SNORD3C-201ENST00000580533 PKN1Q16512 942 aa13.5□□□□□ -0.25
SNORD3C-201ENST00000580533 WDR78Q5VTH9 848 aa13.5□□□□□ -0.25
SNORD3C-201ENST00000580533 LARP1BQ659C4 914 aaKnown RBP13.5□□□□□ -0.25
SNORD3C-201ENST00000580533 ABRAQ8N0Z2 381 aa13.5□□□□□ -0.25
SNORD3C-201ENST00000580533 GPKOWQ92917 476 aaPredicted RBP eCLIP13.5□□□□□ -0.25
SNORD3C-201ENST00000580533 MOV10L1Q9BXT6 1211 aaKnown RBP13.5□□□□□ -0.25
SNORD3C-201ENST00000580533 PSTPIP2Q9H939 334 aa13.5□□□□□ -0.25
SNORD3C-201ENST00000580533 RLFQ13129 1914 aa13.5□□□□□ -0.25
SNORD3C-201ENST00000580533 SMCO2A6NFE2 343 aa13.49□□□□□ -0.25
SNORD3C-201ENST00000580533 GCOM1H8Y6P7 765 aaPredicted RBP13.49□□□□□ -0.25
SNORD3C-201ENST00000580533 CNMDO75829 334 aa13.49□□□□□ -0.25
SNORD3C-201ENST00000580533 GNRH1P01148 92 aa13.49□□□□□ -0.25
SNORD3C-201ENST00000580533 POLR2MP0CAP2 368 aa13.49□□□□□ -0.25
SNORD3C-201ENST00000580533 FCER1AP12319 257 aa13.49□□□□□ -0.25
SNORD3C-201ENST00000580533 FDPSP14324 419 aaKnown RBP13.49□□□□□ -0.25
SNORD3C-201ENST00000580533 ERCC3P19447 782 aa13.49□□□□□ -0.25
SNORD3C-201ENST00000580533 FCGRTP55899 365 aa13.49□□□□□ -0.25
SNORD3C-201ENST00000580533 SP3Q02447 781 aa13.49□□□□□ -0.25
SNORD3C-201ENST00000580533 SLC35G1Q2M3R5 365 aa13.49□□□□□ -0.25
SNORD3C-201ENST00000580533 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.49□□□□□ -0.25
SNORD3C-201ENST00000580533 ANKRD35Q8N283 1001 aa13.49□□□□□ -0.25
SNORD3C-201ENST00000580533 COA7Q96BR5 231 aa13.49□□□□□ -0.25
SNORD3C-201ENST00000580533 ERO1AQ96HE7 468 aa13.49□□□□□ -0.25
SNORD3C-201ENST00000580533 ZMYND12Q9H0C1 365 aa13.49□□□□□ -0.25
SNORD3C-201ENST00000580533 TXNRD2Q9NNW7 524 aa13.49□□□□□ -0.25
SNORD3C-201ENST00000580533 RIC8AQ9NPQ8 531 aa13.49□□□□□ -0.25
SNORD3C-201ENST00000580533 HOMER2Q9NSB8 354 aa13.49□□□□□ -0.25
SNORD3C-201ENST00000580533 VPS54Q9P1Q0 977 aa13.49□□□□□ -0.25
SNORD3C-201ENST00000580533 PIK3CDO00329 1044 aa13.48□□□□□ -0.25
SNORD3C-201ENST00000580533 PPFIA3O75145 1194 aa13.48□□□□□ -0.25
SNORD3C-201ENST00000580533 FOSP01100 380 aaPredicted RBP13.48□□□□□ -0.25
SNORD3C-201ENST00000580533 HOXD10P28358 340 aa13.48□□□□□ -0.25
SNORD3C-201ENST00000580533 KRT2P35908 639 aa13.48□□□□□ -0.25
SNORD3C-201ENST00000580533 AP3B2Q13367 1082 aa13.48□□□□□ -0.25
SNORD3C-201ENST00000580533 RNF207Q6ZRF8 634 aa13.48□□□□□ -0.25
SNORD3C-201ENST00000580533 PLEKHH3Q7Z736 793 aa13.48□□□□□ -0.25
SNORD3C-201ENST00000580533 REXO1Q8N1G1 1221 aaKnown RBP13.48□□□□□ -0.25
SNORD3C-201ENST00000580533 DNAJC5GQ8N7S2 189 aa13.48□□□□□ -0.25
SNORD3C-201ENST00000580533 DAGLBQ8NCG7 672 aa13.48□□□□□ -0.25
SNORD3C-201ENST00000580533 FBXO18Q8NFZ0 1043 aa13.48□□□□□ -0.25
SNORD3C-201ENST00000580533 SOCS4Q8WXH5 440 aa13.48□□□□□ -0.25
SNORD3C-201ENST00000580533 MMP19Q99542 508 aa13.48□□□□□ -0.25
SNORD3C-201ENST00000580533 FOXD4L1Q9NU39 408 aa13.48□□□□□ -0.25
SNORD3C-201ENST00000580533 WBP1LQ9NX94 342 aa13.48□□□□□ -0.25
SNORD3C-201ENST00000580533 PCDHA4Q9UN74 947 aa13.48□□□□□ -0.25
SNORD3C-201ENST00000580533 MYH6P13533 1939 aa13.48□□□□□ -0.25
SNORD3C-201ENST00000580533 SLC15A5A6NIM6 579 aa13.47□□□□□ -0.25
SNORD3C-201ENST00000580533 SPDYE3A6NKU9 549 aa13.47□□□□□ -0.25
SNORD3C-201ENST00000580533 TNPO2O14787 897 aaKnown RBP13.47□□□□□ -0.25
SNORD3C-201ENST00000580533 PPP1R11O60927 126 aaPredicted RBP13.47□□□□□ -0.25
SNORD3C-201ENST00000580533 FKTNO75072 461 aa13.47□□□□□ -0.25
SNORD3C-201ENST00000580533 TBC1D8O95759 1140 aa13.47□□□□□ -0.25
SNORD3C-201ENST00000580533 CFBP00751 764 aa13.47□□□□□ -0.25
SNORD3C-201ENST00000580533 MMP1P03956 469 aa13.47□□□□□ -0.25
SNORD3C-201ENST00000580533 NBR1Q14596 966 aa13.47□□□□□ -0.25
SNORD3C-201ENST00000580533 NSMFQ6X4W1 530 aa13.47□□□□□ -0.25
SNORD3C-201ENST00000580533 JMYQ8N9B5 988 aa13.47□□□□□ -0.25
SNORD3C-201ENST00000580533 PHF20Q9BVI0 1012 aa13.47□□□□□ -0.25
SNORD3C-201ENST00000580533 ADD3Q9UEY8 706 aaKnown RBP13.47□□□□□ -0.25
SNORD3C-201ENST00000580533 COL11A1P12107 1806 aaPredicted RBP13.46□□□□□ -0.25
SNORD3C-201ENST00000580533 LOC102724159A0A0B4J2E5 919 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms