RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 ITGA7Q13683 1181 aa23.09■■□□□ 1.29
LIMD2-209ENST00000580222 OTUD7AQ8TE49 926 aaPredicted RBP23.09■■□□□ 1.29
LIMD2-209ENST00000580222 AGBL1Q96MI9 1066 aa23.09■■□□□ 1.29
LIMD2-209ENST00000580222 GBF1Q92538 1859 aa23.09■■□□□ 1.29
LIMD2-209ENST00000580222 ZBBXA8MT70 800 aa23.08■■□□□ 1.29
LIMD2-209ENST00000580222 ATP2A2P16615 1042 aaKnown RBP23.08■■□□□ 1.29
LIMD2-209ENST00000580222 PSMC6P62333 389 aa23.08■■□□□ 1.29
LIMD2-209ENST00000580222 TTF1Q15361 905 aaPredicted RBP23.08■■□□□ 1.29
LIMD2-209ENST00000580222 DNAJC2Q99543 621 aaKnown RBP23.08■■□□□ 1.29
LIMD2-209ENST00000580222 GNEQ9Y223 722 aaKnown RBP23.08■■□□□ 1.29
LIMD2-209ENST00000580222 MUC6Q6W4X9 2439 aa23.07■■□□□ 1.28
LIMD2-209ENST00000580222 ATP2A1O14983 1001 aa23.07■■□□□ 1.28
LIMD2-209ENST00000580222 MX1P20591 662 aa23.07■■□□□ 1.28
LIMD2-209ENST00000580222 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.07■■□□□ 1.28
LIMD2-209ENST00000580222 SPRED2Q7Z698 418 aa23.07■■□□□ 1.28
LIMD2-209ENST00000580222 ALYREFQ86V81 257 aaKnown RBP23.07■■□□□ 1.28
LIMD2-209ENST00000580222 ATP8A2Q9NTI2 1148 aa23.07■■□□□ 1.28
LIMD2-209ENST00000580222 ECHDC1Q9NTX5 307 aa23.07■■□□□ 1.28
LIMD2-209ENST00000580222 GTF3C3Q9Y5Q9 886 aa23.07■■□□□ 1.28
LIMD2-209ENST00000580222 F5H6K3 240 aa23.06■■□□□ 1.28
LIMD2-209ENST00000580222 GPR37L1O60883 481 aa23.06■■□□□ 1.28
LIMD2-209ENST00000580222 NDUFB10O96000 172 aa23.06■■□□□ 1.28
LIMD2-209ENST00000580222 TNFAIP2Q03169 654 aa23.06■■□□□ 1.28
LIMD2-209ENST00000580222 KLRC3Q07444 240 aa23.06■■□□□ 1.28
LIMD2-209ENST00000580222 ANKRD35Q8N283 1001 aa23.06■■□□□ 1.28
LIMD2-209ENST00000580222 TTC41PQ6P2S7 1318 aa23.06■■□□□ 1.28
LIMD2-209ENST00000580222 SALL3Q9BXA9 1300 aa23.06■■□□□ 1.28
LIMD2-209ENST00000580222 TMEM67Q5HYA8 995 aa23.05■■□□□ 1.28
LIMD2-209ENST00000580222 TSHZ3Q63HK5 1081 aa23.05■■□□□ 1.28
LIMD2-209ENST00000580222 CTR9Q6PD62 1173 aa23.05■■□□□ 1.28
LIMD2-209ENST00000580222 NOL8Q76FK4 1167 aaKnown RBP23.05■■□□□ 1.28
LIMD2-209ENST00000580222 PRPF38AQ8NAV1 312 aaKnown RBP23.05■■□□□ 1.28
LIMD2-209ENST00000580222 SOWAHBA6NEL2 793 aa23.04■■□□□ 1.28
LIMD2-209ENST00000580222 SMPD1P17405 629 aa23.04■■□□□ 1.28
LIMD2-209ENST00000580222 ADD2P35612 726 aa23.04■■□□□ 1.28
LIMD2-209ENST00000580222 FSCN1Q16658 493 aaKnown RBP23.04■■□□□ 1.28
LIMD2-209ENST00000580222 RPUSD2Q8IZ73 545 aaKnown RBP23.04■■□□□ 1.28
LIMD2-209ENST00000580222 KIFC2Q96AC6 838 aa23.04■■□□□ 1.28
LIMD2-209ENST00000580222 SLC38A10Q9HBR0 1119 aa23.04■■□□□ 1.28
LIMD2-209ENST00000580222 PDGFCQ9NRA1 345 aa23.04■■□□□ 1.28
LIMD2-209ENST00000580222 COG5Q9UP83 839 aa23.04■■□□□ 1.28
LIMD2-209ENST00000580222 DYNC1LI2O43237 492 aaPredicted RBP23.03■■□□□ 1.28
LIMD2-209ENST00000580222 ZBED4O75132 1171 aa23.03■■□□□ 1.28
LIMD2-209ENST00000580222 CYP2C9P11712 490 aa23.03■■□□□ 1.28
LIMD2-209ENST00000580222 ATP5JP18859 108 aa23.03■■□□□ 1.28
LIMD2-209ENST00000580222 PDE4AP27815 886 aa23.03■■□□□ 1.28
LIMD2-209ENST00000580222 TAP1Q03518 808 aa23.03■■□□□ 1.28
LIMD2-209ENST00000580222 TLK2Q86UE8 772 aa23.03■■□□□ 1.28
LIMD2-209ENST00000580222 FAM133AQ8N9E0 248 aa23.03■■□□□ 1.28
LIMD2-209ENST00000580222 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.03■■□□□ 1.28
LIMD2-209ENST00000580222 ARNTL2Q8WYA1 636 aa23.03■■□□□ 1.28
LIMD2-209ENST00000580222 BOLA2Q9H3K6 86 aa23.03■■□□□ 1.28
LIMD2-209ENST00000580222 RBAK-RBAKDNI3L0D1 243 aa23.02■■□□□ 1.28
LIMD2-209ENST00000580222 GTPBP6O43824 516 aaPredicted RBP23.02■■□□□ 1.28
LIMD2-209ENST00000580222 CABYRO75952 493 aa23.02■■□□□ 1.28
LIMD2-209ENST00000580222 PDE1AP54750 535 aa23.02■■□□□ 1.28
LIMD2-209ENST00000580222 DEFB128Q7Z7B8 93 aa23.02■■□□□ 1.28
LIMD2-209ENST00000580222 STK11IPQ8N1F8 1099 aa23.02■■□□□ 1.28
LIMD2-209ENST00000580222 HLA-CQ95604 372 aa23.02■■□□□ 1.28
LIMD2-209ENST00000580222 HOMER2Q9NSB8 354 aa23.02■■□□□ 1.28
LIMD2-209ENST00000580222 TRMT13Q9NUP7 481 aaKnown RBP23.02■■□□□ 1.28
LIMD2-209ENST00000580222 LPXNO60711 386 aa23.01■■□□□ 1.27
LIMD2-209ENST00000580222 RASA1P20936 1047 aa23.01■■□□□ 1.27
LIMD2-209ENST00000580222 PLEKHM2Q8IWE5 1019 aa23.01■■□□□ 1.27
LIMD2-209ENST00000580222 ALDH8A1Q9H2A2 487 aaPredicted RBP23.01■■□□□ 1.27
LIMD2-209ENST00000580222 NYAP2Q9P242 653 aa23.01■■□□□ 1.27
LIMD2-209ENST00000580222 PI4K2BG5E9Z4 385 aa23■■□□□ 1.27
LIMD2-209ENST00000580222 GRB10Q13322 594 aa23■■□□□ 1.27
LIMD2-209ENST00000580222 CHST13Q8NET6 341 aa23■■□□□ 1.27
LIMD2-209ENST00000580222 PI4K2BQ8TCG2 481 aa23■■□□□ 1.27
LIMD2-209ENST00000580222 CLIP2Q9UDT6 1046 aa23■■□□□ 1.27
LIMD2-209ENST00000580222 SLC4A4Q9Y6R1 1079 aa23■■□□□ 1.27
LIMD2-209ENST00000580222 TAPT1Q6NXT6 567 aa22.99■■□□□ 1.27
LIMD2-209ENST00000580222 PPP1R13LQ8WUF5 828 aa22.99■■□□□ 1.27
LIMD2-209ENST00000580222 FBXO40Q9UH90 709 aa22.99■■□□□ 1.27
LIMD2-209ENST00000580222 MCM3APO60318 1980 aa22.99■■□□□ 1.27
LIMD2-209ENST00000580222 EEPD1Q7L9B9 569 aa22.98■■□□□ 1.27
LIMD2-209ENST00000580222 HAUS7Q99871 368 aa22.98■■□□□ 1.27
LIMD2-209ENST00000580222 AP5M1Q9H0R1 490 aa22.98■■□□□ 1.27
LIMD2-209ENST00000580222 A1CFQ9NQ94 594 aaKnown RBP22.98■■□□□ 1.27
LIMD2-209ENST00000580222 LRRC37A2A6NM11 1700 aa22.98■■□□□ 1.27
LIMD2-209ENST00000580222 BAZ2AQ9UIF9 1905 aaKnown RBP22.98■■□□□ 1.27
LIMD2-209ENST00000580222 WDFY4Q6ZS81 3184 aa22.97■■□□□ 1.27
LIMD2-209ENST00000580222 IGKV6D-41A0A0C4DH26 115 aa22.97■■□□□ 1.27
LIMD2-209ENST00000580222 PURBQ96QR8 312 aaKnown RBP22.97■■□□□ 1.27
LIMD2-209ENST00000580222 PUS7LQ9H0K6 701 aaKnown RBP22.97■■□□□ 1.27
LIMD2-209ENST00000580222 OSBPL3Q9H4L5 887 aa22.97■■□□□ 1.27
LIMD2-209ENST00000580222 PAG1Q9NWQ8 432 aa22.97■■□□□ 1.27
LIMD2-209ENST00000580222 CTDP1Q9Y5B0 961 aaPredicted RBP22.97■■□□□ 1.27
LIMD2-209ENST00000580222 SKAP1Q86WV1 359 aa22.96■■□□□ 1.27
LIMD2-209ENST00000580222 HERC6Q8IVU3 1022 aa22.96■■□□□ 1.27
LIMD2-209ENST00000580222 FBXO16Q8IX29 292 aaPredicted RBP22.96■■□□□ 1.27
LIMD2-209ENST00000580222 AMOTL1Q8IY63 956 aa22.96■■□□□ 1.27
LIMD2-209ENST00000580222 ZNF536O15090 1300 aa22.96■■□□□ 1.27
LIMD2-209ENST00000580222 FEM1BQ9UK73 627 aa22.95■■□□□ 1.26
LIMD2-209ENST00000580222 TNKSO95271 1327 aa22.94■■□□□ 1.26
LIMD2-209ENST00000580222 LCHNA4D1U4 455 aa22.94■■□□□ 1.26
LIMD2-209ENST00000580222 PFKMP08237 780 aa22.94■■□□□ 1.26
LIMD2-209ENST00000580222 OAZ1P54368 228 aa22.94■■□□□ 1.26
LIMD2-209ENST00000580222 TMCO2Q7Z6W1 182 aaPredicted RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms