RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 SCNN1DP51172 638 aa11.77□□□□□ -0.53
TOP3A-209ENST00000580095 CHMP4BP1P59074 171 aa11.77□□□□□ -0.53
TOP3A-209ENST00000580095 GSTO1P78417 241 aa11.77□□□□□ -0.53
TOP3A-209ENST00000580095 PDE4DQ08499 809 aa11.77□□□□□ -0.53
TOP3A-209ENST00000580095 DYMQ7RTS9 669 aa11.77□□□□□ -0.53
TOP3A-209ENST00000580095 FNBP4Q8N3X1 1017 aaPredicted RBP11.77□□□□□ -0.53
TOP3A-209ENST00000580095 CSGALNACT2Q8N6G5 542 aa11.77□□□□□ -0.53
TOP3A-209ENST00000580095 CCDC148Q8NFR7 591 aa11.77□□□□□ -0.53
TOP3A-209ENST00000580095 PCMTD1Q96MG8 357 aaPredicted RBP11.77□□□□□ -0.53
TOP3A-209ENST00000580095 SLC39A2Q9NP94 309 aa11.77□□□□□ -0.53
TOP3A-209ENST00000580095 SH3GLB2Q9NR46 395 aa11.77□□□□□ -0.53
TOP3A-209ENST00000580095 ARGLU1Q9NWB6 273 aaPredicted RBP11.77□□□□□ -0.53
TOP3A-209ENST00000580095 RMND1Q9NWS8 449 aa11.77□□□□□ -0.53
TOP3A-209ENST00000580095 GGA1Q9UJY5 639 aa11.77□□□□□ -0.53
TOP3A-209ENST00000580095 REXO2Q9Y3B8 237 aaKnown RBP11.77□□□□□ -0.53
TOP3A-209ENST00000580095 COL5A3P25940 1745 aaPredicted RBP11.77□□□□□ -0.53
TOP3A-209ENST00000580095 HSPA1LP34931 641 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 SLC16A2P36021 539 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 GNAQP50148 359 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 RHBDL3P58872 404 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 ANKRD40Q6AI12 368 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 NCAPH2Q6IBW4 605 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 RSRC2Q7L4I2 434 aaKnown RBP11.76□□□□□ -0.53
TOP3A-209ENST00000580095 HINFPQ9BQA5 517 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 TCP11L1Q9NUJ3 509 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 FAM53CQ9NYF3 392 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 TNRC6CQ9HCJ0 1690 aaKnown RBP11.76□□□□□ -0.53
TOP3A-209ENST00000580095 POTEMA6NI47 508 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 TDP2O95551 362 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 TBC1D8O95759 1140 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 OR52Z1P0C646 297 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 ARHGAP25P42331 645 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 PPP4CP60510 307 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 NONOQ15233 471 aaKnown RBP eCLIP11.76□□□□□ -0.53
TOP3A-209ENST00000580095 UBE2SQ16763 222 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 CC2D1AQ6P1N0 951 aaPredicted RBP11.76□□□□□ -0.53
TOP3A-209ENST00000580095 MB21D1Q8N884 522 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 RRP36Q96EU6 259 aaKnown RBP11.76□□□□□ -0.53
TOP3A-209ENST00000580095 DUSP9Q99956 384 aaKnown RBP11.76□□□□□ -0.53
TOP3A-209ENST00000580095 KBTBD4Q9NVX7 518 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 SEC63Q9UGP8 760 aaKnown RBP11.76□□□□□ -0.53
TOP3A-209ENST00000580095 FAM196BA6NMK8 535 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 PSMA7O14818 248 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 SLC37A4O43826 429 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 SERPINB2P05120 415 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 LDHCP07864 332 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 SHROOM1Q2M3G4 852 aaPredicted RBP11.76□□□□□ -0.53
TOP3A-209ENST00000580095 SOGA3Q5TF21 947 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 CYP26C1Q6V0L0 522 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 C16orf86Q6ZW13 317 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 GLIS3Q8NEA6 775 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 ANKS1AQ92625 1134 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 ZMYND12Q9H0C1 365 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 DUSP10Q9Y6W6 482 aa11.76□□□□□ -0.53
TOP3A-209ENST00000580095 CTAGE9A4FU28 777 aa11.75□□□□□ -0.53
TOP3A-209ENST00000580095 H7C1D1 291 aa11.75□□□□□ -0.53
TOP3A-209ENST00000580095 SRGAP2O75044 1071 aa11.75□□□□□ -0.53
TOP3A-209ENST00000580095 AKR1B1P15121 316 aa11.75□□□□□ -0.53
TOP3A-209ENST00000580095 CYP27A1Q02318 531 aa11.75□□□□□ -0.53
TOP3A-209ENST00000580095 DOK7Q18PE1 504 aa11.75□□□□□ -0.53
TOP3A-209ENST00000580095 TTBK2Q6IQ55 1244 aa11.75□□□□□ -0.53
TOP3A-209ENST00000580095 TTI2Q6NXR4 508 aa11.75□□□□□ -0.53
TOP3A-209ENST00000580095 DPP8Q6V1X1 898 aaPredicted RBP11.75□□□□□ -0.53
TOP3A-209ENST00000580095 TMTC1Q8IUR5 882 aa11.75□□□□□ -0.53
TOP3A-209ENST00000580095 GOLGA1Q92805 767 aa11.75□□□□□ -0.53
TOP3A-209ENST00000580095 PNKPQ96T60 521 aa11.75□□□□□ -0.53
TOP3A-209ENST00000580095 NUDT12Q9BQG2 462 aa11.75□□□□□ -0.53
TOP3A-209ENST00000580095 MMTAG2Q9BU76 263 aaKnown RBP11.75□□□□□ -0.53
TOP3A-209ENST00000580095 NAA15Q9BXJ9 866 aaKnown RBP11.75□□□□□ -0.53
TOP3A-209ENST00000580095 TRIM9Q9C026 710 aa11.75□□□□□ -0.53
TOP3A-209ENST00000580095 SNED1Q8TER0 1413 aa11.75□□□□□ -0.53
TOP3A-209ENST00000580095 GPR75-ASB3A0A0A6YYF3 556 aa11.75□□□□□ -0.53
TOP3A-209ENST00000580095 MCM6Q14566 821 aa11.75□□□□□ -0.53
TOP3A-209ENST00000580095 LRRC41Q15345 812 aa11.75□□□□□ -0.53
TOP3A-209ENST00000580095 CT47A1Q5JQC4 288 aaPredicted RBP11.75□□□□□ -0.53
TOP3A-209ENST00000580095 NEK8Q86SG6 692 aa11.75□□□□□ -0.53
TOP3A-209ENST00000580095 TBC1D16Q8TBP0 767 aa11.75□□□□□ -0.53
TOP3A-209ENST00000580095 TUBGCP2Q9BSJ2 902 aa11.75□□□□□ -0.53
TOP3A-209ENST00000580095 DDX4Q9NQI0 724 aaKnown RBP11.75□□□□□ -0.53
TOP3A-209ENST00000580095 EXOC1Q9NV70 894 aa11.75□□□□□ -0.53
TOP3A-209ENST00000580095 MAGEC2Q9UBF1 373 aaPredicted RBP11.75□□□□□ -0.53
TOP3A-209ENST00000580095 LUC7L2Q9Y383 392 aaKnown RBP11.75□□□□□ -0.53
TOP3A-209ENST00000580095 EPN1Q9Y6I3 576 aaPredicted RBP11.75□□□□□ -0.53
TOP3A-209ENST00000580095 KIAA1551Q9HCM1 1747 aa11.75□□□□□ -0.53
TOP3A-209ENST00000580095 LGALS16A8MUM7 142 aa11.74□□□□□ -0.53
TOP3A-209ENST00000580095 NDUFA10O95299 355 aa11.74□□□□□ -0.53
TOP3A-209ENST00000580095 GYS1P13807 737 aa11.74□□□□□ -0.53
TOP3A-209ENST00000580095 IDEP14735 1019 aa11.74□□□□□ -0.53
TOP3A-209ENST00000580095 TRIM21P19474 475 aaKnown RBP11.74□□□□□ -0.53
TOP3A-209ENST00000580095 TNNI2P48788 182 aa11.74□□□□□ -0.53
TOP3A-209ENST00000580095 CACNB3P54284 484 aa11.74□□□□□ -0.53
TOP3A-209ENST00000580095 SPAG1Q07617 926 aa11.74□□□□□ -0.53
TOP3A-209ENST00000580095 WDR59Q6PJI9 974 aa11.74□□□□□ -0.53
TOP3A-209ENST00000580095 REXO1Q8N1G1 1221 aaKnown RBP11.74□□□□□ -0.53
TOP3A-209ENST00000580095 GPR161Q8N6U8 529 aaKnown RBP11.74□□□□□ -0.53
TOP3A-209ENST00000580095 NOA1Q8NC60 698 aaKnown RBP11.74□□□□□ -0.53
TOP3A-209ENST00000580095 GIMAP8Q8ND71 665 aaPredicted RBP11.74□□□□□ -0.53
TOP3A-209ENST00000580095 NEDD1Q8NHV4 660 aa11.74□□□□□ -0.53
TOP3A-209ENST00000580095 C6orf50Q9HD87 102 aa11.74□□□□□ -0.53
TOP3A-209ENST00000580095 RCCD1A6NED2 376 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms