RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 STX8Q9UNK0 236 aa22.76■■□□□ 1.23
CDKN2A-213ENST00000579122 TSPY2A6NKD2 308 aa22.75■■□□□ 1.23
CDKN2A-213ENST00000579122 KCTD1Q719H9 257 aa22.75■■□□□ 1.23
CDKN2A-213ENST00000579122 TLK2Q86UE8 772 aa22.75■■□□□ 1.23
CDKN2A-213ENST00000579122 OTUD7AQ8TE49 926 aaPredicted RBP22.75■■□□□ 1.23
CDKN2A-213ENST00000579122 SYMPKQ92797 1274 aaKnown RBP22.75■■□□□ 1.23
CDKN2A-213ENST00000579122 SEZ6LQ9BYH1 1024 aa22.75■■□□□ 1.23
CDKN2A-213ENST00000579122 AP5M1Q9H0R1 490 aa22.75■■□□□ 1.23
CDKN2A-213ENST00000579122 IL17RBQ9NRM6 502 aa22.75■■□□□ 1.23
CDKN2A-213ENST00000579122 CHD9Q3L8U1 2897 aa22.74■■□□□ 1.23
CDKN2A-213ENST00000579122 FOXP2O15409 715 aa22.74■■□□□ 1.23
CDKN2A-213ENST00000579122 FSCN1Q16658 493 aaKnown RBP22.74■■□□□ 1.23
CDKN2A-213ENST00000579122 CXCL17Q6UXB2 119 aa22.74■■□□□ 1.23
CDKN2A-213ENST00000579122 ZNF365Q70YC5 407 aa22.74■■□□□ 1.23
CDKN2A-213ENST00000579122 CHMP4CQ96CF2 233 aa22.74■■□□□ 1.23
CDKN2A-213ENST00000579122 PBX4Q9BYU1 374 aa22.74■■□□□ 1.23
CDKN2A-213ENST00000579122 IL23AQ9NPF7 189 aa22.74■■□□□ 1.23
CDKN2A-213ENST00000579122 CYP39A1Q9NYL5 469 aa22.74■■□□□ 1.23
CDKN2A-213ENST00000579122 PRR12Q9ULL5 1215 aa22.74■■□□□ 1.23
CDKN2A-213ENST00000579122 ZEB2O60315 1214 aa22.73■■□□□ 1.23
CDKN2A-213ENST00000579122 ACRP10323 421 aa22.73■■□□□ 1.23
CDKN2A-213ENST00000579122 SMPD1P17405 629 aa22.73■■□□□ 1.23
CDKN2A-213ENST00000579122 MX1P20591 662 aa22.73■■□□□ 1.23
CDKN2A-213ENST00000579122 CYP2C18P33260 490 aa22.73■■□□□ 1.23
CDKN2A-213ENST00000579122 CTDSPL2Q05D32 466 aa22.73■■□□□ 1.23
CDKN2A-213ENST00000579122 IQSEC1Q6DN90 963 aa22.73■■□□□ 1.23
CDKN2A-213ENST00000579122 ANAPC4Q9UJX5 808 aa22.73■■□□□ 1.23
CDKN2A-213ENST00000579122 Q9Y3F1 56 aa22.73■■□□□ 1.23
CDKN2A-213ENST00000579122 PCDHB15Q9Y5E8 787 aa22.73■■□□□ 1.23
CDKN2A-213ENST00000579122 LRRC37A2A6NM11 1700 aa22.73■■□□□ 1.23
CDKN2A-213ENST00000579122 GRXCR1A8MXD5 290 aa22.72■■□□□ 1.23
CDKN2A-213ENST00000579122 NMT2O60551 498 aa22.72■■□□□ 1.23
CDKN2A-213ENST00000579122 PBX2P40425 430 aa22.72■■□□□ 1.23
CDKN2A-213ENST00000579122 NOVP48745 357 aa22.72■■□□□ 1.23
CDKN2A-213ENST00000579122 ITGA7Q13683 1181 aa22.72■■□□□ 1.23
CDKN2A-213ENST00000579122 MUM1L1Q5H9M0 696 aa22.72■■□□□ 1.23
CDKN2A-213ENST00000579122 TAPT1Q6NXT6 567 aa22.72■■□□□ 1.23
CDKN2A-213ENST00000579122 HERVK_113Q902F9 699 aa22.72■■□□□ 1.23
CDKN2A-213ENST00000579122 DYNC1LI2O43237 492 aaPredicted RBP22.71■■□□□ 1.23
CDKN2A-213ENST00000579122 ICAM1P05362 532 aa22.71■■□□□ 1.23
CDKN2A-213ENST00000579122 SNAP25P60880 206 aa22.71■■□□□ 1.23
CDKN2A-213ENST00000579122 USP38Q8NB14 1042 aa22.71■■□□□ 1.23
CDKN2A-213ENST00000579122 MORC4Q8TE76 937 aa22.71■■□□□ 1.23
CDKN2A-213ENST00000579122 DCAF4Q8WV16 495 aa22.71■■□□□ 1.23
CDKN2A-213ENST00000579122 HIPK3Q9H422 1215 aa22.71■■□□□ 1.23
CDKN2A-213ENST00000579122 VTA1Q9NP79 307 aa22.71■■□□□ 1.23
CDKN2A-213ENST00000579122 INCENPQ9NQS7 918 aa22.71■■□□□ 1.23
CDKN2A-213ENST00000579122 PDGFCQ9NRA1 345 aa22.71■■□□□ 1.23
CDKN2A-213ENST00000579122 CCPG1Q9ULG6 757 aa22.71■■□□□ 1.23
CDKN2A-213ENST00000579122 MUC3AQ02505 3323 aa22.7■■□□□ 1.23
CDKN2A-213ENST00000579122 ORC4O43929 436 aa22.7■■□□□ 1.22
CDKN2A-213ENST00000579122 RANBP6O60518 1105 aaKnown RBP22.7■■□□□ 1.22
CDKN2A-213ENST00000579122 NSMFQ6X4W1 530 aa22.7■■□□□ 1.22
CDKN2A-213ENST00000579122 FBXO16Q8IX29 292 aaPredicted RBP22.7■■□□□ 1.22
CDKN2A-213ENST00000579122 GAS2L1Q99501 681 aaPredicted RBP22.7■■□□□ 1.22
CDKN2A-213ENST00000579122 MTIF3Q9H2K0 278 aaKnown RBP22.7■■□□□ 1.22
CDKN2A-213ENST00000579122 RANBP17Q9H2T7 1088 aaKnown RBP22.7■■□□□ 1.22
CDKN2A-213ENST00000579122 DDX49Q9Y6V7 483 aaKnown RBP22.7■■□□□ 1.22
CDKN2A-213ENST00000579122 GRIN2DO15399 1336 aa22.7■■□□□ 1.22
CDKN2A-213ENST00000579122 SALL3Q9BXA9 1300 aa22.7■■□□□ 1.22
CDKN2A-213ENST00000579122 FGBP02675 491 aa22.69■■□□□ 1.22
CDKN2A-213ENST00000579122 CENPBP07199 599 aaPredicted RBP22.69■■□□□ 1.22
CDKN2A-213ENST00000579122 FGRP09769 529 aa22.69■■□□□ 1.22
CDKN2A-213ENST00000579122 RAB30Q15771 203 aa22.69■■□□□ 1.22
CDKN2A-213ENST00000579122 TJAP1Q5JTD0 557 aa22.69■■□□□ 1.22
CDKN2A-213ENST00000579122 EEPD1Q7L9B9 569 aa22.69■■□□□ 1.22
CDKN2A-213ENST00000579122 RASGRP2Q7LDG7 609 aa22.69■■□□□ 1.22
CDKN2A-213ENST00000579122 MSRAQ9UJ68 235 aa22.69■■□□□ 1.22
CDKN2A-213ENST00000579122 TTC28Q96AY4 2481 aa22.69■■□□□ 1.22
CDKN2A-213ENST00000579122 PTGS1P23219 599 aa22.68■■□□□ 1.22
CDKN2A-213ENST00000579122 ALX1Q15699 326 aa22.68■■□□□ 1.22
CDKN2A-213ENST00000579122 CCDC96Q2M329 555 aa22.68■■□□□ 1.22
CDKN2A-213ENST00000579122 VPS53Q5VIR6 699 aa22.68■■□□□ 1.22
CDKN2A-213ENST00000579122 BTNL9Q6UXG8 535 aa22.68■■□□□ 1.22
CDKN2A-213ENST00000579122 NOC4LQ9BVI4 516 aaKnown RBP22.68■■□□□ 1.22
CDKN2A-213ENST00000579122 CXXC1Q9P0U4 656 aaPredicted RBP22.68■■□□□ 1.22
CDKN2A-213ENST00000579122 ADD3Q9UEY8 706 aaKnown RBP22.68■■□□□ 1.22
CDKN2A-213ENST00000579122 MTMR7Q9Y216 660 aa22.68■■□□□ 1.22
CDKN2A-213ENST00000579122 UMODL1Q5DID0 1318 aa22.67■■□□□ 1.22
CDKN2A-213ENST00000579122 LOC102724159A0A0B4J2E5 919 aa22.67■■□□□ 1.22
CDKN2A-213ENST00000579122 PWP2Q15269 919 aaKnown RBP22.67■■□□□ 1.22
CDKN2A-213ENST00000579122 AKNAD1Q5T1N1 836 aa22.67■■□□□ 1.22
CDKN2A-213ENST00000579122 TMEM63BQ5T3F8 832 aa22.67■■□□□ 1.22
CDKN2A-213ENST00000579122 KIAA1211Q6ZU35 1233 aa22.67■■□□□ 1.22
CDKN2A-213ENST00000579122 EVI5LQ96CN4 794 aa22.67■■□□□ 1.22
CDKN2A-213ENST00000579122 TRPV6Q9H1D0 765 aa22.67■■□□□ 1.22
CDKN2A-213ENST00000579122 PRDM12Q9H4Q4 367 aa22.67■■□□□ 1.22
CDKN2A-213ENST00000579122 HELLSQ9NRZ9 838 aa22.67■■□□□ 1.22
CDKN2A-213ENST00000579122 B4GALT4O60513 344 aa22.66■■□□□ 1.22
CDKN2A-213ENST00000579122 DUSP28Q4G0W2 176 aa22.66■■□□□ 1.22
CDKN2A-213ENST00000579122 SYDE2Q5VT97 1194 aa22.66■■□□□ 1.22
CDKN2A-213ENST00000579122 PURBQ96QR8 312 aaKnown RBP22.66■■□□□ 1.22
CDKN2A-213ENST00000579122 PRDM6Q9NQX0 595 aa22.66■■□□□ 1.22
CDKN2A-213ENST00000579122 LCTP09848 1927 aa22.66■■□□□ 1.22
CDKN2A-213ENST00000579122 TOP1P11387 765 aaKnown RBP22.65■■□□□ 1.22
CDKN2A-213ENST00000579122 ALDH5A1P51649 535 aaPredicted RBP22.65■■□□□ 1.22
CDKN2A-213ENST00000579122 CCL23P55773 120 aa22.65■■□□□ 1.22
CDKN2A-213ENST00000579122 PSMC6P62333 389 aa22.65■■□□□ 1.22
CDKN2A-213ENST00000579122 BAATQ14032 418 aaPredicted RBP22.65■■□□□ 1.22
CDKN2A-213ENST00000579122 TTBK2Q6IQ55 1244 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms