RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 MMP1P03956 469 aa16■□□□□ 0.15
CSNK1D-209ENST00000578904 PKN1Q16512 942 aa16■□□□□ 0.15
CSNK1D-209ENST00000578904 FOXD4L5Q5VV16 416 aaPredicted RBP16■□□□□ 0.15
CSNK1D-209ENST00000578904 PPP1R18Q6NYC8 613 aa16■□□□□ 0.15
CSNK1D-209ENST00000578904 HEATR3Q7Z4Q2 680 aa16■□□□□ 0.15
CSNK1D-209ENST00000578904 ANKRD13CQ8N6S4 541 aa16■□□□□ 0.15
CSNK1D-209ENST00000578904 FOXD4L4Q8WXT5 416 aaPredicted RBP16■□□□□ 0.15
CSNK1D-209ENST00000578904 PIBF1Q8WXW3 757 aa16■□□□□ 0.15
CSNK1D-209ENST00000578904 ZNF396Q96N95 335 aaPredicted RBP16■□□□□ 0.15
CSNK1D-209ENST00000578904 FOXP1Q9H334 677 aaPredicted RBP16■□□□□ 0.15
CSNK1D-209ENST00000578904 C6orf50Q9HD87 102 aa16■□□□□ 0.15
CSNK1D-209ENST00000578904 BARHL2Q9NY43 387 aa16■□□□□ 0.15
CSNK1D-209ENST00000578904 CFAP45Q9UL16 551 aa16■□□□□ 0.15
CSNK1D-209ENST00000578904 ZDHHC9Q9Y397 364 aa16■□□□□ 0.15
CSNK1D-209ENST00000578904 RABGAP1Q9Y3P9 1069 aa16■□□□□ 0.15
CSNK1D-209ENST00000578904 DDX11L8A8MPP1 907 aa15.99■□□□□ 0.15
CSNK1D-209ENST00000578904 KRT2P35908 639 aa15.99■□□□□ 0.15
CSNK1D-209ENST00000578904 LBX1P52954 281 aa15.99■□□□□ 0.15
CSNK1D-209ENST00000578904 NAPAP54920 295 aa15.99■□□□□ 0.15
CSNK1D-209ENST00000578904 SNAP25P60880 206 aa15.99■□□□□ 0.15
CSNK1D-209ENST00000578904 GUCY1B3Q02153 619 aa15.99■□□□□ 0.15
CSNK1D-209ENST00000578904 PLS1Q14651 629 aa15.99■□□□□ 0.15
CSNK1D-209ENST00000578904 FAM110CQ1W6H9 321 aa15.99■□□□□ 0.15
CSNK1D-209ENST00000578904 CCDC174Q6PII3 467 aa15.99■□□□□ 0.15
CSNK1D-209ENST00000578904 TEX2Q8IWB9 1127 aa15.99■□□□□ 0.15
CSNK1D-209ENST00000578904 ABHD8Q96I13 439 aa15.99■□□□□ 0.15
CSNK1D-209ENST00000578904 PIGSQ96S52 555 aa15.99■□□□□ 0.15
CSNK1D-209ENST00000578904 RANBP17Q9H2T7 1088 aaKnown RBP15.99■□□□□ 0.15
CSNK1D-209ENST00000578904 R3HDMLQ9H3Y0 253 aa15.99■□□□□ 0.15
CSNK1D-209ENST00000578904 JMJD4Q9H9V9 463 aa15.99■□□□□ 0.15
CSNK1D-209ENST00000578904 SLC38A10Q9HBR0 1119 aa15.99■□□□□ 0.15
CSNK1D-209ENST00000578904 TXNRD2Q9NNW7 524 aa15.99■□□□□ 0.15
CSNK1D-209ENST00000578904 BTBD7Q9P203 1132 aa15.99■□□□□ 0.15
CSNK1D-209ENST00000578904 RBPJLQ9UBG7 517 aa15.99■□□□□ 0.15
CSNK1D-209ENST00000578904 ADAMTS5Q9UNA0 930 aa15.99■□□□□ 0.15
CSNK1D-209ENST00000578904 PEX10O60683 326 aa15.98■□□□□ 0.15
CSNK1D-209ENST00000578904 DTNBO60941 627 aa15.98■□□□□ 0.15
CSNK1D-209ENST00000578904 CNMDO75829 334 aa15.98■□□□□ 0.15
CSNK1D-209ENST00000578904 BCRP11274 1271 aa15.98■□□□□ 0.15
CSNK1D-209ENST00000578904 ERVK-9P63128 1117 aa15.98■□□□□ 0.15
CSNK1D-209ENST00000578904 ERVK-24P63145 666 aa15.98■□□□□ 0.15
CSNK1D-209ENST00000578904 KRT85P78386 507 aa15.98■□□□□ 0.15
CSNK1D-209ENST00000578904 TMEM132BQ14DG7 1078 aa15.98■□□□□ 0.15
CSNK1D-209ENST00000578904 CDC37Q16543 378 aaPredicted RBP15.98■□□□□ 0.15
CSNK1D-209ENST00000578904 SLC35G1Q2M3R5 365 aa15.98■□□□□ 0.15
CSNK1D-209ENST00000578904 C17orf99Q6UX52 265 aa15.98■□□□□ 0.15
CSNK1D-209ENST00000578904 REPS2Q8NFH8 660 aa15.98■□□□□ 0.15
CSNK1D-209ENST00000578904 MTMR8Q96EF0 704 aa15.98■□□□□ 0.15
CSNK1D-209ENST00000578904 AIFM3Q96NN9 605 aa15.98■□□□□ 0.15
CSNK1D-209ENST00000578904 PHF20Q9BVI0 1012 aa15.98■□□□□ 0.15
CSNK1D-209ENST00000578904 AMNQ9BXJ7 453 aa15.98■□□□□ 0.15
CSNK1D-209ENST00000578904 VPS54Q9P1Q0 977 aa15.98■□□□□ 0.15
CSNK1D-209ENST00000578904 MORF4L1Q9UBU8 362 aa15.98■□□□□ 0.15
CSNK1D-209ENST00000578904 TSKSQ9UJT2 592 aa15.98■□□□□ 0.15
CSNK1D-209ENST00000578904 COL11A1P12107 1806 aaPredicted RBP15.98■□□□□ 0.15
CSNK1D-209ENST00000578904 hCG_1642624A0A1W2PR95 340 aa15.97■□□□□ 0.15
CSNK1D-209ENST00000578904 ESYT2A0FGR8 921 aa15.97■□□□□ 0.15
CSNK1D-209ENST00000578904 BAG4O95429 457 aaKnown RBP15.97■□□□□ 0.15
CSNK1D-209ENST00000578904 RESTQ13127 1097 aa15.97■□□□□ 0.15
CSNK1D-209ENST00000578904 MCTP2Q6DN12 878 aa15.97■□□□□ 0.15
CSNK1D-209ENST00000578904 POTEEQ6S8J3 1075 aa15.97■□□□□ 0.15
CSNK1D-209ENST00000578904 FERMT3Q86UX7 667 aa15.97■□□□□ 0.15
CSNK1D-209ENST00000578904 FBXO11Q86XK2 927 aa15.97■□□□□ 0.15
CSNK1D-209ENST00000578904 DIS3L2Q8IYB7 885 aaKnown RBP15.97■□□□□ 0.15
CSNK1D-209ENST00000578904 CPXCR1Q8N123 301 aa15.97■□□□□ 0.15
CSNK1D-209ENST00000578904 GPRC5AQ8NFJ5 357 aa15.97■□□□□ 0.15
CSNK1D-209ENST00000578904 SPATC1LQ9H0A9 340 aa15.97■□□□□ 0.15
CSNK1D-209ENST00000578904 RAVER2Q9HCJ3 691 aaKnown RBP15.97■□□□□ 0.15
CSNK1D-209ENST00000578904 ZNF214Q9UL59 606 aaPredicted RBP15.97■□□□□ 0.15
CSNK1D-209ENST00000578904 NCLP19338 710 aaKnown RBP15.96■□□□□ 0.15
CSNK1D-209ENST00000578904 U2AF2P26368 475 aaKnown RBP eCLIP15.96■□□□□ 0.151e-7■■■□□ 15.7
CSNK1D-209ENST00000578904 MRPL12P52815 198 aaKnown RBP15.96■□□□□ 0.15
CSNK1D-209ENST00000578904 OAZ1P54368 228 aa15.96■□□□□ 0.15
CSNK1D-209ENST00000578904 CCNA1P78396 465 aa15.96■□□□□ 0.15
CSNK1D-209ENST00000578904 QRICH1Q2TAL8 776 aa15.96■□□□□ 0.15
CSNK1D-209ENST00000578904 WWC2Q6AWC2 1192 aa15.96■□□□□ 0.15
CSNK1D-209ENST00000578904 SNRNP48Q6IEG0 339 aaKnown RBP15.96■□□□□ 0.15
CSNK1D-209ENST00000578904 TEX13BQ9BXU2 312 aa15.96■□□□□ 0.15
CSNK1D-209ENST00000578904 SCAND2PQ9GZW5 306 aaPredicted RBP15.96■□□□□ 0.15
CSNK1D-209ENST00000578904 CCPG1Q9ULG6 757 aa15.96■□□□□ 0.15
CSNK1D-209ENST00000578904 NOL7Q9UMY1 257 aaKnown RBP15.96■□□□□ 0.15
CSNK1D-209ENST00000578904 PCDHA4Q9UN74 947 aa15.96■□□□□ 0.15
CSNK1D-209ENST00000578904 GPR25O00155 361 aa15.95■□□□□ 0.14
CSNK1D-209ENST00000578904 STXBP3O00186 592 aa15.95■□□□□ 0.14
CSNK1D-209ENST00000578904 ICAM1P05362 532 aa15.95■□□□□ 0.14
CSNK1D-209ENST00000578904 STAT3P40763 770 aa15.95■□□□□ 0.14
CSNK1D-209ENST00000578904 MLLT1Q03111 559 aaPredicted RBP15.95■□□□□ 0.14
CSNK1D-209ENST00000578904 NOSTRINQ8IVI9 506 aa15.95■□□□□ 0.14
CSNK1D-209ENST00000578904 CCAR1Q8IX12 1150 aaKnown RBP15.95■□□□□ 0.14
CSNK1D-209ENST00000578904 BLIDQ8IZY5 108 aa15.95■□□□□ 0.14
CSNK1D-209ENST00000578904 DAGLBQ8NCG7 672 aa15.95■□□□□ 0.14
CSNK1D-209ENST00000578904 GPKOWQ92917 476 aaPredicted RBP eCLIP15.95■□□□□ 0.14
CSNK1D-209ENST00000578904 ZMYND12Q9H0C1 365 aa15.95■□□□□ 0.14
CSNK1D-209ENST00000578904 KCNJ14Q9UNX9 436 aa15.95■□□□□ 0.14
CSNK1D-209ENST00000578904 ZNF536O15090 1300 aa15.94■□□□□ 0.14
CSNK1D-209ENST00000578904 SMCO2A6NFE2 343 aa15.94■□□□□ 0.14
CSNK1D-209ENST00000578904 ATP2A1O14983 1001 aa15.94■□□□□ 0.14
CSNK1D-209ENST00000578904 TAL1P17542 331 aaPredicted RBP15.94■□□□□ 0.14
CSNK1D-209ENST00000578904 COPB2P35606 906 aa15.94■□□□□ 0.14
CSNK1D-209ENST00000578904 ADCY7P51828 1080 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms