RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 DYNC1LI2O43237 492 aaPredicted RBP10.56□□□□□ -0.72
GGA3-207ENST00000578896 ORC4O43929 436 aa10.56□□□□□ -0.72
GGA3-207ENST00000578896 ACRP10323 421 aa10.56□□□□□ -0.72
GGA3-207ENST00000578896 HSPD1P10809 573 aaKnown RBP10.56□□□□□ -0.72
GGA3-207ENST00000578896 SMPD1P17405 629 aa10.56□□□□□ -0.72
GGA3-207ENST00000578896 GJA9P57773 515 aa10.56□□□□□ -0.72
GGA3-207ENST00000578896 TNFAIP2Q03169 654 aa10.56□□□□□ -0.72
GGA3-207ENST00000578896 FPGSQ05932 587 aa10.56□□□□□ -0.72
GGA3-207ENST00000578896 HDAC1Q13547 482 aaPredicted RBP10.56□□□□□ -0.72
GGA3-207ENST00000578896 MCMDC2Q4G0Z9 681 aa10.56□□□□□ -0.72
GGA3-207ENST00000578896 FAM109BQ6ICB4 259 aaPredicted RBP10.56□□□□□ -0.72
GGA3-207ENST00000578896 CXCL17Q6UXB2 119 aa10.56□□□□□ -0.72
GGA3-207ENST00000578896 ANKRD33Q7Z3H0 272 aa10.56□□□□□ -0.72
GGA3-207ENST00000578896 FBXO16Q8IX29 292 aaPredicted RBP10.56□□□□□ -0.72
GGA3-207ENST00000578896 NUP133Q8WUM0 1156 aa10.56□□□□□ -0.72
GGA3-207ENST00000578896 MYLIPQ8WY64 445 aa10.56□□□□□ -0.72
GGA3-207ENST00000578896 GLT1D1Q96MS3 346 aa10.56□□□□□ -0.72
GGA3-207ENST00000578896 TMEM47Q9BQJ4 181 aa10.56□□□□□ -0.72
GGA3-207ENST00000578896 UPF3AQ9H1J1 476 aaKnown RBP10.56□□□□□ -0.72
GGA3-207ENST00000578896 CYP39A1Q9NYL5 469 aa10.56□□□□□ -0.72
GGA3-207ENST00000578896 ANAPC4Q9UJX5 808 aa10.56□□□□□ -0.72
GGA3-207ENST00000578896 CCPG1Q9ULG6 757 aa10.56□□□□□ -0.72
GGA3-207ENST00000578896 GRXCR1A8MXD5 290 aa10.55□□□□□ -0.72
GGA3-207ENST00000578896 ARVCFO00192 962 aa10.55□□□□□ -0.72
GGA3-207ENST00000578896 TIMP1P01033 207 aa10.55□□□□□ -0.72
GGA3-207ENST00000578896 IGHDP01880 384 aa10.55□□□□□ -0.72
GGA3-207ENST00000578896 FDX1P10109 184 aa10.55□□□□□ -0.72
GGA3-207ENST00000578896 CST5P28325 142 aaPredicted RBP10.55□□□□□ -0.72
GGA3-207ENST00000578896 CDK7P50613 346 aa10.55□□□□□ -0.72
GGA3-207ENST00000578896 BAATQ14032 418 aaPredicted RBP10.55□□□□□ -0.72
GGA3-207ENST00000578896 ALX1Q15699 326 aa10.55□□□□□ -0.72
GGA3-207ENST00000578896 C16orf59Q7L2K0 433 aa10.55□□□□□ -0.72
GGA3-207ENST00000578896 PCSK9Q8NBP7 692 aaKnown RBP10.55□□□□□ -0.72
GGA3-207ENST00000578896 PPP1R13LQ8WUF5 828 aa10.55□□□□□ -0.72
GGA3-207ENST00000578896 TOX2Q96NM4 488 aa10.55□□□□□ -0.72
GGA3-207ENST00000578896 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.55□□□□□ -0.721e-6■■■□□ 15.6
GGA3-207ENST00000578896 ZKSCAN3Q9BRR0 538 aa10.55□□□□□ -0.72
GGA3-207ENST00000578896 CPVLQ9H3G5 476 aa10.55□□□□□ -0.72
GGA3-207ENST00000578896 SPC25Q9HBM1 224 aa10.55□□□□□ -0.72
GGA3-207ENST00000578896 TBX21Q9UL17 535 aa10.55□□□□□ -0.72
GGA3-207ENST00000578896 GNEQ9Y223 722 aaKnown RBP10.55□□□□□ -0.72
GGA3-207ENST00000578896 A0A0U1RQG5 324 aaPredicted RBP10.54□□□□□ -0.72
GGA3-207ENST00000578896 ASB14A6NK59 587 aa10.54□□□□□ -0.72
GGA3-207ENST00000578896 RBAK-RBAKDNI3L0D1 243 aa10.54□□□□□ -0.72
GGA3-207ENST00000578896 NFIBO00712 420 aa10.54□□□□□ -0.72
GGA3-207ENST00000578896 PLA2G6O60733 806 aa10.54□□□□□ -0.72
GGA3-207ENST00000578896 FGRP09769 529 aa10.54□□□□□ -0.72
GGA3-207ENST00000578896 GOLGA8HP0CJ92 632 aa10.54□□□□□ -0.72
GGA3-207ENST00000578896 TOP1P11387 765 aaKnown RBP10.54□□□□□ -0.72
GGA3-207ENST00000578896 CSF2RAP15509 400 aa10.54□□□□□ -0.72
GGA3-207ENST00000578896 CYP2C18P33260 490 aa10.54□□□□□ -0.72
GGA3-207ENST00000578896 NOVP48745 357 aa10.54□□□□□ -0.72
GGA3-207ENST00000578896 PSMC6P62333 389 aa10.54□□□□□ -0.72
GGA3-207ENST00000578896 SMAD3P84022 425 aaKnown RBP10.54□□□□□ -0.72
GGA3-207ENST00000578896 TKFCQ3LXA3 575 aa10.54□□□□□ -0.72
GGA3-207ENST00000578896 SYDE2Q5VT97 1194 aa10.54□□□□□ -0.72
GGA3-207ENST00000578896 TAPT1Q6NXT6 567 aa10.54□□□□□ -0.72
GGA3-207ENST00000578896 KIAA1211Q6ZU35 1233 aa10.54□□□□□ -0.72
GGA3-207ENST00000578896 TLK2Q86UE8 772 aa10.54□□□□□ -0.72
GGA3-207ENST00000578896 TBC1D10CQ8IV04 446 aa10.54□□□□□ -0.72
GGA3-207ENST00000578896 DCAF4Q8WV16 495 aa10.54□□□□□ -0.72
GGA3-207ENST00000578896 RANBP17Q9H2T7 1088 aaKnown RBP10.54□□□□□ -0.72
GGA3-207ENST00000578896 GRIN2DO15399 1336 aa10.54□□□□□ -0.72
GGA3-207ENST00000578896 ELP1O95163 1332 aa10.54□□□□□ -0.72
GGA3-207ENST00000578896 UMODL1Q5DID0 1318 aa10.54□□□□□ -0.72
GGA3-207ENST00000578896 BAZ2BQ9UIF8 2168 aaKnown RBP10.53□□□□□ -0.72
GGA3-207ENST00000578896 PTPDC1A2A3K4 754 aa10.53□□□□□ -0.72
GGA3-207ENST00000578896 ICAM1P05362 532 aa10.53□□□□□ -0.72
GGA3-207ENST00000578896 PDHBP11177 359 aa10.53□□□□□ -0.72
GGA3-207ENST00000578896 SDSP20132 328 aa10.53□□□□□ -0.72
GGA3-207ENST00000578896 CALML3P27482 149 aa10.53□□□□□ -0.72
GGA3-207ENST00000578896 FSCN1Q16658 493 aaKnown RBP10.53□□□□□ -0.72
GGA3-207ENST00000578896 PPP4R3BQ5MIZ7 849 aa10.53□□□□□ -0.72
GGA3-207ENST00000578896 TMEM240Q5SV17 173 aa10.53□□□□□ -0.72
GGA3-207ENST00000578896 MFSD5Q6N075 450 aa10.53□□□□□ -0.72
GGA3-207ENST00000578896 SLC30A10Q6XR72 485 aa10.53□□□□□ -0.72
GGA3-207ENST00000578896 PLEKHM2Q8IWE5 1019 aa10.53□□□□□ -0.72
GGA3-207ENST00000578896 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.53□□□□□ -0.72
GGA3-207ENST00000578896 FAM126BQ8IXS8 530 aa10.53□□□□□ -0.72
GGA3-207ENST00000578896 EXOC6Q8TAG9 804 aa10.53□□□□□ -0.72
GGA3-207ENST00000578896 UBA5Q9GZZ9 404 aa10.53□□□□□ -0.72
GGA3-207ENST00000578896 AP5M1Q9H0R1 490 aa10.53□□□□□ -0.72
GGA3-207ENST00000578896 TRPV6Q9H1D0 765 aa10.53□□□□□ -0.72
GGA3-207ENST00000578896 NEDD4P46934 1319 aa10.53□□□□□ -0.72
GGA3-207ENST00000578896 CCDC171Q6TFL3 1326 aa10.53□□□□□ -0.72
GGA3-207ENST00000578896 LRRC37A2A6NM11 1700 aa10.53□□□□□ -0.72
GGA3-207ENST00000578896 PBX2P40425 430 aa10.52□□□□□ -0.73
GGA3-207ENST00000578896 ALDH5A1P51649 535 aaPredicted RBP10.52□□□□□ -0.73
GGA3-207ENST00000578896 CCL23P55773 120 aa10.52□□□□□ -0.73
GGA3-207ENST00000578896 ITGA7Q13683 1181 aa10.52□□□□□ -0.73
GGA3-207ENST00000578896 GRIN2CQ14957 1233 aa10.52□□□□□ -0.73
GGA3-207ENST00000578896 AKNAD1Q5T1N1 836 aa10.52□□□□□ -0.73
GGA3-207ENST00000578896 CWC27Q6UX04 472 aaKnown RBP10.52□□□□□ -0.73
GGA3-207ENST00000578896 BTNL9Q6UXG8 535 aa10.52□□□□□ -0.73
GGA3-207ENST00000578896 MFSD6Q6ZSS7 791 aa10.52□□□□□ -0.73
GGA3-207ENST00000578896 ZNF365Q70YC5 407 aa10.52□□□□□ -0.73
GGA3-207ENST00000578896 MAFAQ8NHW3 353 aaPredicted RBP10.52□□□□□ -0.73
GGA3-207ENST00000578896 CLEC4DQ8WXI8 215 aa10.52□□□□□ -0.73
GGA3-207ENST00000578896 COL25A1Q9BXS0 654 aaPredicted RBP10.52□□□□□ -0.73
GGA3-207ENST00000578896 NCOR1O75376 2440 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms