RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 SRBD1Q8N5C6 995 aaKnown RBP12.96□□□□□ -0.33
TRAPPC8-204ENST00000578252 MB21D1Q8N884 522 aa12.96□□□□□ -0.33
TRAPPC8-204ENST00000578252 ZDHHC16Q969W1 377 aa12.96□□□□□ -0.33
TRAPPC8-204ENST00000578252 KIFC2Q96AC6 838 aa12.96□□□□□ -0.33
TRAPPC8-204ENST00000578252 RRP36Q96EU6 259 aaKnown RBP12.96□□□□□ -0.33
TRAPPC8-204ENST00000578252 SEC63Q9UGP8 760 aaKnown RBP12.96□□□□□ -0.33
TRAPPC8-204ENST00000578252 PRR12Q9ULL5 1215 aa12.96□□□□□ -0.33
TRAPPC8-204ENST00000578252 CTDP1Q9Y5B0 961 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC8-204ENST00000578252 WDR33Q9C0J8 1336 aaKnown RBP12.95□□□□□ -0.34
TRAPPC8-204ENST00000578252 PTPDC1A2A3K4 754 aa12.95□□□□□ -0.34
TRAPPC8-204ENST00000578252 hCG_1984214I3L0E3 225 aa12.95□□□□□ -0.34
TRAPPC8-204ENST00000578252 PDHXO00330 501 aa12.95□□□□□ -0.34
TRAPPC8-204ENST00000578252 PRPF3O43395 683 aaKnown RBP12.95□□□□□ -0.34
TRAPPC8-204ENST00000578252 ZBED4O75132 1171 aa12.95□□□□□ -0.34
TRAPPC8-204ENST00000578252 FMNL1O95466 1100 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC8-204ENST00000578252 ALDH1A1P00352 501 aa12.95□□□□□ -0.34
TRAPPC8-204ENST00000578252 SLC16A2P36021 539 aa12.95□□□□□ -0.34
TRAPPC8-204ENST00000578252 KIF23Q02241 960 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC8-204ENST00000578252 ST3GAL1Q11201 340 aa12.95□□□□□ -0.34
TRAPPC8-204ENST00000578252 GRM1Q13255 1194 aa12.95□□□□□ -0.34
TRAPPC8-204ENST00000578252 NBPF11Q86T75 865 aa12.95□□□□□ -0.34
TRAPPC8-204ENST00000578252 ZNF713Q8N859 430 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC8-204ENST00000578252 NSUN7Q8NE18 718 aaKnown RBP12.95□□□□□ -0.34
TRAPPC8-204ENST00000578252 SMARCC2Q8TAQ2 1214 aa12.95□□□□□ -0.34
TRAPPC8-204ENST00000578252 WASF1Q92558 559 aa12.95□□□□□ -0.34
TRAPPC8-204ENST00000578252 PARK7Q99497 189 aaKnown RBP12.95□□□□□ -0.34
TRAPPC8-204ENST00000578252 UBA5Q9GZZ9 404 aa12.95□□□□□ -0.34
TRAPPC8-204ENST00000578252 ASCC2Q9H1I8 757 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC8-204ENST00000578252 RANBP17Q9H2T7 1088 aaKnown RBP12.95□□□□□ -0.34
TRAPPC8-204ENST00000578252 FBXO28Q9NVF7 368 aa12.95□□□□□ -0.34
TRAPPC8-204ENST00000578252 DAXXQ9UER7 740 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC8-204ENST00000578252 PNMA6FA0A0J9YX94 578 aa12.94□□□□□ -0.34
TRAPPC8-204ENST00000578252 SPDYE16A6NNV3 312 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC8-204ENST00000578252 ZBTB5O15062 677 aa12.94□□□□□ -0.34
TRAPPC8-204ENST00000578252 CYTH3O43739 400 aa12.94□□□□□ -0.34
TRAPPC8-204ENST00000578252 DEXIO95424 95 aa12.94□□□□□ -0.34
TRAPPC8-204ENST00000578252 CTDNEP1O95476 244 aa12.94□□□□□ -0.34
TRAPPC8-204ENST00000578252 GCLCP48506 637 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC8-204ENST00000578252 OAZ1P54368 228 aa12.94□□□□□ -0.34
TRAPPC8-204ENST00000578252 HERVK_113P62684 666 aa12.94□□□□□ -0.34
TRAPPC8-204ENST00000578252 FAM177A1Q8N128 213 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC8-204ENST00000578252 CCDC82Q8N4S0 544 aa12.94□□□□□ -0.34
TRAPPC8-204ENST00000578252 MTMR8Q96EF0 704 aa12.94□□□□□ -0.34
TRAPPC8-204ENST00000578252 SLC26A6Q9BXS9 759 aa12.94□□□□□ -0.34
TRAPPC8-204ENST00000578252 ADAM33Q9BZ11 813 aa12.94□□□□□ -0.34
TRAPPC8-204ENST00000578252 JMJD4Q9H9V9 463 aa12.94□□□□□ -0.34
TRAPPC8-204ENST00000578252 WDR70Q9NW82 654 aa12.94□□□□□ -0.34
TRAPPC8-204ENST00000578252 ADAMTS5Q9UNA0 930 aa12.94□□□□□ -0.34
TRAPPC8-204ENST00000578252 SMC3Q9UQE7 1217 aa12.94□□□□□ -0.34
TRAPPC8-204ENST00000578252 COL11A1P12107 1806 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC8-204ENST00000578252 IGF2BP3O00425 579 aaKnown RBP eCLIP12.93□□□□□ -0.34
TRAPPC8-204ENST00000578252 VWA5AO00534 786 aa12.93□□□□□ -0.34
TRAPPC8-204ENST00000578252 PTPREP23469 700 aa12.93□□□□□ -0.34
TRAPPC8-204ENST00000578252 VEGFBP49765 207 aa12.93□□□□□ -0.34
TRAPPC8-204ENST00000578252 CDC37Q16543 378 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC8-204ENST00000578252 CMTR1Q8N1G2 835 aaKnown RBP12.93□□□□□ -0.34
TRAPPC8-204ENST00000578252 FAM43AQ8N2R8 423 aa12.93□□□□□ -0.34
TRAPPC8-204ENST00000578252 SMCR8Q8TEV9 937 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC8-204ENST00000578252 PHKBQ93100 1093 aa12.93□□□□□ -0.34
TRAPPC8-204ENST00000578252 ATG4CQ96DT6 458 aa12.93□□□□□ -0.34
TRAPPC8-204ENST00000578252 PTPN18Q99952 460 aa12.93□□□□□ -0.34
TRAPPC8-204ENST00000578252 CPVLQ9H3G5 476 aa12.93□□□□□ -0.34
TRAPPC8-204ENST00000578252 SLC38A10Q9HBR0 1119 aa12.93□□□□□ -0.34
TRAPPC8-204ENST00000578252 VAT1LQ9HCJ6 419 aa12.93□□□□□ -0.34
TRAPPC8-204ENST00000578252 ORC3Q9UBD5 711 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC8-204ENST00000578252 V9GY48 417 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC8-204ENST00000578252 BAZ2BQ9UIF8 2168 aaKnown RBP12.93□□□□□ -0.34
TRAPPC8-204ENST00000578252 ATP2A1O14983 1001 aa12.92□□□□□ -0.34
TRAPPC8-204ENST00000578252 AOC2O75106 756 aa12.92□□□□□ -0.34
TRAPPC8-204ENST00000578252 SCG2P13521 617 aa12.92□□□□□ -0.34
TRAPPC8-204ENST00000578252 XBP1P17861 261 aa12.92□□□□□ -0.34
TRAPPC8-204ENST00000578252 TAF1CQ15572 869 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC8-204ENST00000578252 PFKFB3Q16875 520 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC8-204ENST00000578252 SLC35G1Q2M3R5 365 aa12.92□□□□□ -0.34
TRAPPC8-204ENST00000578252 QRICH1Q2TAL8 776 aa12.92□□□□□ -0.34
TRAPPC8-204ENST00000578252 PPP1R18Q6NYC8 613 aa12.92□□□□□ -0.34
TRAPPC8-204ENST00000578252 FBXO11Q86XK2 927 aa12.92□□□□□ -0.34
TRAPPC8-204ENST00000578252 HOMER1Q86YM7 354 aa12.92□□□□□ -0.34
TRAPPC8-204ENST00000578252 FAM184AQ8NB25 1140 aa12.92□□□□□ -0.34
TRAPPC8-204ENST00000578252 PIGSQ96S52 555 aa12.92□□□□□ -0.34
TRAPPC8-204ENST00000578252 P2RX7Q99572 595 aaKnown RBP12.92□□□□□ -0.34
TRAPPC8-204ENST00000578252 AMNQ9BXJ7 453 aa12.92□□□□□ -0.34
TRAPPC8-204ENST00000578252 RABGAP1Q9Y3P9 1069 aa12.92□□□□□ -0.34
TRAPPC8-204ENST00000578252 PCDHGA10Q9Y5H3 936 aa12.92□□□□□ -0.34
TRAPPC8-204ENST00000578252 JAK2O60674 1132 aa12.91□□□□□ -0.34
TRAPPC8-204ENST00000578252 ICAM1P05362 532 aa12.91□□□□□ -0.34
TRAPPC8-204ENST00000578252 PDIA4P13667 645 aaKnown RBP12.91□□□□□ -0.34
TRAPPC8-204ENST00000578252 PDCP20941 246 aa12.91□□□□□ -0.34
TRAPPC8-204ENST00000578252 GJB2P29033 226 aa12.91□□□□□ -0.34
TRAPPC8-204ENST00000578252 COPB2P35606 906 aa12.91□□□□□ -0.34
TRAPPC8-204ENST00000578252 HTRA3P83110 453 aa12.91□□□□□ -0.34
TRAPPC8-204ENST00000578252 TKFCQ3LXA3 575 aa12.91□□□□□ -0.34
TRAPPC8-204ENST00000578252 TEX2Q8IWB9 1127 aa12.91□□□□□ -0.34
TRAPPC8-204ENST00000578252 RGS22Q8NE09 1264 aa12.91□□□□□ -0.34
TRAPPC8-204ENST00000578252 REPS2Q8NFH8 660 aa12.91□□□□□ -0.34
TRAPPC8-204ENST00000578252 CCDC12Q8WUD4 166 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC8-204ENST00000578252 TEX13BQ9BXU2 312 aa12.91□□□□□ -0.34
TRAPPC8-204ENST00000578252 ZFYVE28Q9HCC9 887 aa12.91□□□□□ -0.34
TRAPPC8-204ENST00000578252 CWC22Q9HCG8 908 aaKnown RBP12.91□□□□□ -0.34
TRAPPC8-204ENST00000578252 SH3GLB2Q9NR46 395 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms