RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 CCDC96Q2M329 555 aa14.95□□□□□ -0.02
CCDC57-211ENST00000578187 TRIM60Q495X7 471 aa14.95□□□□□ -0.02
CCDC57-211ENST00000578187 C1orf53Q5VUE5 145 aa14.95□□□□□ -0.02
CCDC57-211ENST00000578187 MAMDC4Q6UXC1 1216 aa14.95□□□□□ -0.02
CCDC57-211ENST00000578187 BTNL9Q6UXG8 535 aa14.95□□□□□ -0.02
CCDC57-211ENST00000578187 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.95□□□□□ -0.02
CCDC57-211ENST00000578187 DEFB123Q8N688 67 aa14.95□□□□□ -0.02
CCDC57-211ENST00000578187 PNMA1Q8ND90 353 aa14.95□□□□□ -0.02
CCDC57-211ENST00000578187 ACAD9Q9H845 621 aa14.95□□□□□ -0.02
CCDC57-211ENST00000578187 HOMER2Q9NSB8 354 aa14.95□□□□□ -0.02
CCDC57-211ENST00000578187 RIPK3Q9Y572 518 aa14.95□□□□□ -0.02
CCDC57-211ENST00000578187 DNAJC25-GNG10A0A024R161 153 aa14.94□□□□□ -0.02
CCDC57-211ENST00000578187 PGK1P00558 417 aa14.94□□□□□ -0.02
CCDC57-211ENST00000578187 ZNF865P0CJ78 1059 aaPredicted RBP14.94□□□□□ -0.02
CCDC57-211ENST00000578187 ANTXR2P58335 489 aa14.94□□□□□ -0.02
CCDC57-211ENST00000578187 ZNF543Q08ER8 600 aa14.94□□□□□ -0.02
CCDC57-211ENST00000578187 TKFCQ3LXA3 575 aa14.94□□□□□ -0.02
CCDC57-211ENST00000578187 RNF20Q5VTR2 975 aa14.94□□□□□ -0.02
CCDC57-211ENST00000578187 CHMP4CQ96CF2 233 aa14.94□□□□□ -0.02
CCDC57-211ENST00000578187 TSEN34Q9BSV6 310 aaKnown RBP14.94□□□□□ -0.02
CCDC57-211ENST00000578187 ABHD16BQ9H3Z7 469 aa14.94□□□□□ -0.02
CCDC57-211ENST00000578187 KAT14Q9H8E8 782 aa14.94□□□□□ -0.02
CCDC57-211ENST00000578187 MTMR7Q9Y216 660 aa14.94□□□□□ -0.02
CCDC57-211ENST00000578187 DNAH12Q6ZR08 3092 aa14.94□□□□□ -0.02
CCDC57-211ENST00000578187 SMCHD1A6NHR9 2005 aa14.93□□□□□ -0.02
CCDC57-211ENST00000578187 A0A1W2PQ45 241 aaPredicted RBP14.93□□□□□ -0.02
CCDC57-211ENST00000578187 A0A1W2PQY0 241 aa14.93□□□□□ -0.02
CCDC57-211ENST00000578187 MOXD2PA6NHM9 499 aa14.93□□□□□ -0.02
CCDC57-211ENST00000578187 REC8O95072 547 aa14.93□□□□□ -0.02
CCDC57-211ENST00000578187 TAL1P17542 331 aaPredicted RBP14.93□□□□□ -0.02
CCDC57-211ENST00000578187 IFIT1BQ5T764 474 aaKnown RBP14.93□□□□□ -0.02
CCDC57-211ENST00000578187 MTA3Q9BTC8 594 aa14.93□□□□□ -0.02
CCDC57-211ENST00000578187 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.93□□□□□ -0.02
CCDC57-211ENST00000578187 PRR12Q9ULL5 1215 aa14.93□□□□□ -0.02
CCDC57-211ENST00000578187 FRMPD2Q68DX3 1309 aaPredicted RBP14.92□□□□□ -0.02
CCDC57-211ENST00000578187 SYNRGQ9UMZ2 1314 aa14.92□□□□□ -0.02
CCDC57-211ENST00000578187 LTBP2Q14767 1821 aa14.92□□□□□ -0.02
CCDC57-211ENST00000578187 LCTP09848 1927 aa14.92□□□□□ -0.02
CCDC57-211ENST00000578187 POTEB2H3BUK9 544 aa14.92□□□□□ -0.02
CCDC57-211ENST00000578187 EPB41L2O43491 1005 aaKnown RBP14.92□□□□□ -0.02
CCDC57-211ENST00000578187 DUSP11O75319 330 aaKnown RBP14.92□□□□□ -0.02
CCDC57-211ENST00000578187 CLTBP09497 229 aa14.92□□□□□ -0.02
CCDC57-211ENST00000578187 ACVR2BQ13705 512 aa14.92□□□□□ -0.02
CCDC57-211ENST00000578187 SART3Q15020 963 aaKnown RBP14.92□□□□□ -0.02
CCDC57-211ENST00000578187 TSGA10IPQ3SY00 556 aa14.92□□□□□ -0.02
CCDC57-211ENST00000578187 GPATCH4Q5T3I0 446 aaKnown RBP14.92□□□□□ -0.02
CCDC57-211ENST00000578187 TTBK2Q6IQ55 1244 aa14.92□□□□□ -0.02
CCDC57-211ENST00000578187 PCSK9Q8NBP7 692 aaKnown RBP14.92□□□□□ -0.02
CCDC57-211ENST00000578187 KCNB2Q92953 911 aa14.92□□□□□ -0.02
CCDC57-211ENST00000578187 RANBP17Q9H2T7 1088 aaKnown RBP14.92□□□□□ -0.02
CCDC57-211ENST00000578187 STARD7Q9NQZ5 370 aa14.92□□□□□ -0.02
CCDC57-211ENST00000578187 RNF146Q9NTX7 359 aa14.92□□□□□ -0.02
CCDC57-211ENST00000578187 LAMA3Q16787 3333 aa14.92□□□□□ -0.02
CCDC57-211ENST00000578187 ZNF536O15090 1300 aa14.92□□□□□ -0.02
CCDC57-211ENST00000578187 MROH7Q68CQ1 1323 aa14.92□□□□□ -0.02
CCDC57-211ENST00000578187 ERICH2A1L162 156 aa14.91□□□□□ -0.02
CCDC57-211ENST00000578187 ASB14A6NK59 587 aa14.91□□□□□ -0.02
CCDC57-211ENST00000578187 DCDC2CA8MYV0 355 aa14.91□□□□□ -0.02
CCDC57-211ENST00000578187 IFIT3O14879 490 aaKnown RBP14.91□□□□□ -0.02
CCDC57-211ENST00000578187 PQBP1O60828 265 aaKnown RBP14.91□□□□□ -0.02
CCDC57-211ENST00000578187 SNAI1O95863 264 aaPredicted RBP14.91□□□□□ -0.02
CCDC57-211ENST00000578187 C6orf222P0C671 652 aaPredicted RBP14.91□□□□□ -0.02
CCDC57-211ENST00000578187 ALAS1P13196 640 aa14.91□□□□□ -0.02
CCDC57-211ENST00000578187 HSPA4P34932 840 aa14.91□□□□□ -0.02
CCDC57-211ENST00000578187 ACLYP53396 1101 aa14.91□□□□□ -0.02
CCDC57-211ENST00000578187 COL9A3Q14050 684 aaPredicted RBP14.91□□□□□ -0.02
CCDC57-211ENST00000578187 ASPRV1Q53RT3 343 aa14.91□□□□□ -0.02
CCDC57-211ENST00000578187 SYDE2Q5VT97 1194 aa14.91□□□□□ -0.02
CCDC57-211ENST00000578187 ARMCX2Q7L311 632 aa14.91□□□□□ -0.02
CCDC57-211ENST00000578187 CHST3Q7LGC8 479 aa14.91□□□□□ -0.02
CCDC57-211ENST00000578187 RASEFQ8IZ41 740 aa14.91□□□□□ -0.02
CCDC57-211ENST00000578187 IGDCC4Q8TDY8 1250 aa14.91□□□□□ -0.02
CCDC57-211ENST00000578187 GLT1D1Q96MS3 346 aa14.91□□□□□ -0.02
CCDC57-211ENST00000578187 TRERF1Q96PN7 1200 aa14.91□□□□□ -0.02
CCDC57-211ENST00000578187 SENP2Q9HC62 589 aa14.91□□□□□ -0.02
CCDC57-211ENST00000578187 GPCPD1Q9NPB8 672 aa14.91□□□□□ -0.02
CCDC57-211ENST00000578187 PDLIM7Q9NR12 457 aa14.91□□□□□ -0.02
CCDC57-211ENST00000578187 PRC1O43663 620 aa14.9□□□□□ -0.02
CCDC57-211ENST00000578187 ADAMTS4O75173 837 aa14.9□□□□□ -0.02
CCDC57-211ENST00000578187 GOLGA8HP0CJ92 632 aa14.9□□□□□ -0.02
CCDC57-211ENST00000578187 RAG1P15918 1043 aa14.9□□□□□ -0.02
CCDC57-211ENST00000578187 MCM5P33992 734 aa14.9□□□□□ -0.02
CCDC57-211ENST00000578187 SLC16A2P36021 539 aa14.9□□□□□ -0.02
CCDC57-211ENST00000578187 TLE2Q04725 743 aa14.9□□□□□ -0.02
CCDC57-211ENST00000578187 KRT32Q14532 448 aa14.9□□□□□ -0.02
CCDC57-211ENST00000578187 WTAPQ15007 396 aa14.9□□□□□ -0.02
CCDC57-211ENST00000578187 CCDC144BQ3MJ40 725 aa14.9□□□□□ -0.02
CCDC57-211ENST00000578187 TMEM67Q5HYA8 995 aa14.9□□□□□ -0.02
CCDC57-211ENST00000578187 CCDC174Q6PII3 467 aa14.9□□□□□ -0.02
CCDC57-211ENST00000578187 NOL8Q76FK4 1167 aaKnown RBP14.9□□□□□ -0.02
CCDC57-211ENST00000578187 CCDC144CPQ8IYA2 1237 aa14.9□□□□□ -0.02
CCDC57-211ENST00000578187 BADQ92934 168 aa14.9□□□□□ -0.02
CCDC57-211ENST00000578187 VTI1AQ96AJ9 217 aa14.9□□□□□ -0.02
CCDC57-211ENST00000578187 LENG1Q96BZ8 264 aaPredicted RBP14.9□□□□□ -0.02
CCDC57-211ENST00000578187 TMEM87BQ96K49 555 aa14.9□□□□□ -0.02
CCDC57-211ENST00000578187 AGBL1Q96MI9 1066 aa14.9□□□□□ -0.02
CCDC57-211ENST00000578187 PNMA2Q9UL42 364 aa14.9□□□□□ -0.02
CCDC57-211ENST00000578187 CCPG1Q9ULG6 757 aa14.9□□□□□ -0.02
CCDC57-211ENST00000578187 WDR19Q8NEZ3 1342 aa14.9□□□□□ -0.02
CCDC57-211ENST00000578187 SH2B2O14492 632 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms