RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 SLC16A2P36021 539 aa14.24□□□□□ -0.13
TSEN54-204ENST00000577197 CLK2P49760 499 aaKnown RBP14.24□□□□□ -0.13
TSEN54-204ENST00000577197 FOSBP53539 338 aa14.24□□□□□ -0.13
TSEN54-204ENST00000577197 HMGCS2P54868 508 aa14.24□□□□□ -0.13
TSEN54-204ENST00000577197 INHBEP58166 350 aa14.24□□□□□ -0.13
TSEN54-204ENST00000577197 IKQ13123 557 aaPredicted RBP14.24□□□□□ -0.13
TSEN54-204ENST00000577197 NOGQ13253 232 aa14.24□□□□□ -0.13
TSEN54-204ENST00000577197 NR5A1Q13285 461 aa14.24□□□□□ -0.13
TSEN54-204ENST00000577197 PAXIP1Q6ZW49 1069 aaPredicted RBP14.24□□□□□ -0.13
TSEN54-204ENST00000577197 REM2Q8IYK8 340 aaPredicted RBP14.24□□□□□ -0.13
TSEN54-204ENST00000577197 SPICE1Q8N0Z3 855 aa14.24□□□□□ -0.13
TSEN54-204ENST00000577197 CPVLQ9H3G5 476 aa14.24□□□□□ -0.13
TSEN54-204ENST00000577197 VAT1LQ9HCJ6 419 aa14.24□□□□□ -0.13
TSEN54-204ENST00000577197 PCDHA1Q9Y5I3 950 aa14.24□□□□□ -0.13
TSEN54-204ENST00000577197 RLFQ13129 1914 aa14.23□□□□□ -0.13
TSEN54-204ENST00000577197 TESPA1A2RU30 521 aaPredicted RBP14.23□□□□□ -0.13
TSEN54-204ENST00000577197 SPTLC2O15270 562 aa14.23□□□□□ -0.13
TSEN54-204ENST00000577197 RAD21O60216 631 aa14.23□□□□□ -0.13
TSEN54-204ENST00000577197 TRAK2O60296 914 aa14.23□□□□□ -0.13
TSEN54-204ENST00000577197 PPP1R11O60927 126 aaPredicted RBP14.23□□□□□ -0.13
TSEN54-204ENST00000577197 ICAM1P05362 532 aa14.23□□□□□ -0.13
TSEN54-204ENST00000577197 HOXA7P31268 230 aaPredicted RBP14.23□□□□□ -0.13
TSEN54-204ENST00000577197 PTPAQ15257 358 aa14.23□□□□□ -0.13
TSEN54-204ENST00000577197 ADALQ6DHV7 355 aa14.23□□□□□ -0.13
TSEN54-204ENST00000577197 CYP4F22Q6NT55 531 aa14.23□□□□□ -0.13
TSEN54-204ENST00000577197 LBX2Q6XYB7 198 aa14.23□□□□□ -0.13
TSEN54-204ENST00000577197 OXER1Q8TDS5 423 aa14.23□□□□□ -0.13
TSEN54-204ENST00000577197 SYAP1Q96A49 352 aaPredicted RBP14.23□□□□□ -0.13
TSEN54-204ENST00000577197 MS4A4AQ96JQ5 239 aa14.23□□□□□ -0.13
TSEN54-204ENST00000577197 CAPNS2Q96L46 248 aa14.23□□□□□ -0.13
TSEN54-204ENST00000577197 NUP88Q99567 741 aaPredicted RBP14.23□□□□□ -0.13
TSEN54-204ENST00000577197 SLC38A10Q9HBR0 1119 aa14.23□□□□□ -0.13
TSEN54-204ENST00000577197 HOXC10Q9NYD6 342 aa14.23□□□□□ -0.13
TSEN54-204ENST00000577197 PCDHA6Q9UN73 950 aa14.23□□□□□ -0.13
TSEN54-204ENST00000577197 MRPL11Q9Y3B7 192 aaKnown RBP14.23□□□□□ -0.13
TSEN54-204ENST00000577197 PCDHA8Q9Y5H6 950 aa14.23□□□□□ -0.13
TSEN54-204ENST00000577197 CCL15-CCL14A0A0B4J2E2 113 aa14.22□□□□□ -0.13
TSEN54-204ENST00000577197 USP17L15C9J2P7 530 aa14.22□□□□□ -0.13
TSEN54-204ENST00000577197 USP17L13C9JLJ4 530 aa14.22□□□□□ -0.13
TSEN54-204ENST00000577197 USP17L11C9JVI0 530 aa14.22□□□□□ -0.13
TSEN54-204ENST00000577197 USP17L18D6R9N7 530 aa14.22□□□□□ -0.13
TSEN54-204ENST00000577197 USP17L22D6RA61 530 aa14.22□□□□□ -0.13
TSEN54-204ENST00000577197 USP17L17D6RBQ6 530 aa14.22□□□□□ -0.13
TSEN54-204ENST00000577197 USP17L19D6RCP7 530 aa14.22□□□□□ -0.13
TSEN54-204ENST00000577197 USP17L20D6RJB6 530 aa14.22□□□□□ -0.13
TSEN54-204ENST00000577197 TOB1P50616 345 aaPredicted RBP14.22□□□□□ -0.13
TSEN54-204ENST00000577197 USP17L24Q0WX57 530 aa14.22□□□□□ -0.13
TSEN54-204ENST00000577197 SREBF2Q12772 1141 aa14.22□□□□□ -0.13
TSEN54-204ENST00000577197 PABPC4Q13310 644 aaKnown RBP eCLIP14.22□□□□□ -0.131e-6■■■■□ 24.7
TSEN54-204ENST00000577197 STK38Q15208 465 aa14.22□□□□□ -0.13
TSEN54-204ENST00000577197 NONOQ15233 471 aaKnown RBP eCLIP14.22□□□□□ -0.13
TSEN54-204ENST00000577197 ZYXQ15942 572 aaKnown RBP14.22□□□□□ -0.13
TSEN54-204ENST00000577197 CCL15Q16663 113 aa14.22□□□□□ -0.13
TSEN54-204ENST00000577197 ARL6IP4Q66PJ3 421 aaKnown RBP14.22□□□□□ -0.13
TSEN54-204ENST00000577197 FAM173BQ6P4H8 233 aa14.22□□□□□ -0.13
TSEN54-204ENST00000577197 MOXD1Q6UVY6 613 aa14.22□□□□□ -0.13
TSEN54-204ENST00000577197 CATSPERGQ6ZRH7 1159 aa14.22□□□□□ -0.13
TSEN54-204ENST00000577197 MB21D1Q8N884 522 aa14.22□□□□□ -0.13
TSEN54-204ENST00000577197 ZNF579Q8NAF0 562 aaKnown RBP14.22□□□□□ -0.13
TSEN54-204ENST00000577197 PSTPIP2Q9H939 334 aa14.22□□□□□ -0.13
TSEN54-204ENST00000577197 ISY1Q9ULR0 285 aaKnown RBP14.22□□□□□ -0.13
TSEN54-204ENST00000577197 DDX49Q9Y6V7 483 aaKnown RBP14.22□□□□□ -0.13
TSEN54-204ENST00000577197 A0A0G2JMZ2 1700 aa14.21□□□□□ -0.13
TSEN54-204ENST00000577197 GOLGA6L4A6NEF3 574 aa14.21□□□□□ -0.13
TSEN54-204ENST00000577197 GCFC2P16383 781 aaKnown RBP14.21□□□□□ -0.13
TSEN54-204ENST00000577197 MAP2K2P36507 400 aa14.21□□□□□ -0.13
TSEN54-204ENST00000577197 MKRN3Q13064 507 aaKnown RBP14.21□□□□□ -0.13
TSEN54-204ENST00000577197 MOGSQ13724 837 aa14.21□□□□□ -0.13
TSEN54-204ENST00000577197 COG2Q14746 738 aa14.21□□□□□ -0.13
TSEN54-204ENST00000577197 SF3A1Q15459 793 aaKnown RBP14.21□□□□□ -0.13
TSEN54-204ENST00000577197 TKFCQ3LXA3 575 aa14.21□□□□□ -0.13
TSEN54-204ENST00000577197 GADL1Q6ZQY3 521 aa14.21□□□□□ -0.13
TSEN54-204ENST00000577197 ANKRD23Q86SG2 305 aa14.21□□□□□ -0.13
TSEN54-204ENST00000577197 GTF3C2Q8WUA4 911 aaPredicted RBP14.21□□□□□ -0.13
TSEN54-204ENST00000577197 FERMT2Q96AC1 680 aa14.21□□□□□ -0.13
TSEN54-204ENST00000577197 RPAP3Q9H6T3 665 aaPredicted RBP14.21□□□□□ -0.13
TSEN54-204ENST00000577197 ZCCHC17Q9NP64 241 aaKnown RBP14.21□□□□□ -0.13
TSEN54-204ENST00000577197 TFIP11Q9UBB9 837 aaKnown RBP14.21□□□□□ -0.13
TSEN54-204ENST00000577197 AGTPBP1Q9UPW5 1226 aa14.21□□□□□ -0.13
TSEN54-204ENST00000577197 SLC45A1Q9Y2W3 748 aa14.21□□□□□ -0.13
TSEN54-204ENST00000577197 RABGAP1Q9Y3P9 1069 aa14.21□□□□□ -0.13
TSEN54-204ENST00000577197 RBBP6Q7Z6E9 1792 aaKnown RBP14.2□□□□□ -0.14
TSEN54-204ENST00000577197 FAM237AA0A1B0GTK4 181 aa14.2□□□□□ -0.14
TSEN54-204ENST00000577197 ZBED4O75132 1171 aa14.2□□□□□ -0.14
TSEN54-204ENST00000577197 FLOT1O75955 427 aa14.2□□□□□ -0.14
TSEN54-204ENST00000577197 DSG3P32926 999 aa14.2□□□□□ -0.14
TSEN54-204ENST00000577197 PRPHP41219 470 aa14.2□□□□□ -0.14
TSEN54-204ENST00000577197 TTC38Q5R3I4 469 aa14.2□□□□□ -0.14
TSEN54-204ENST00000577197 NEK8Q86SG6 692 aa14.2□□□□□ -0.14
TSEN54-204ENST00000577197 MCF2L2Q86YR7 1114 aa14.2□□□□□ -0.14
TSEN54-204ENST00000577197 PIBF1Q8WXW3 757 aa14.2□□□□□ -0.14
TSEN54-204ENST00000577197 BRI3BPQ8WY22 251 aa14.2□□□□□ -0.14
TSEN54-204ENST00000577197 KIFC2Q96AC6 838 aa14.2□□□□□ -0.14
TSEN54-204ENST00000577197 COA7Q96BR5 231 aa14.2□□□□□ -0.14
TSEN54-204ENST00000577197 TANGO6Q9C0B7 1094 aa14.2□□□□□ -0.14
TSEN54-204ENST00000577197 VWA5AO00534 786 aa14.19□□□□□ -0.14
TSEN54-204ENST00000577197 CUTAO60888 179 aa14.19□□□□□ -0.14
TSEN54-204ENST00000577197 PTPREP23469 700 aa14.19□□□□□ -0.14
TSEN54-204ENST00000577197 COPB2P35606 906 aa14.19□□□□□ -0.14
TSEN54-204ENST00000577197 TM4SF4P48230 202 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms