RNA–Protein interactions for RNA: ENST00000577134.1

SPOP-222, Transcript of speckle type BTB/POZ protein, human

TSL 2

Gene SPOP, Length 421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOP-222	ENST00000577134	TSKS	Q9UJT2	592 aa		11.48	□□□□□ -0.57
SPOP-222	ENST00000577134	SMC3	Q9UQE7	1217 aa		11.48	□□□□□ -0.57
SPOP-222	ENST00000577134	ABCB11	O95342	1321 aa		11.48	□□□□□ -0.57
SPOP-222	ENST00000577134	STXBP3	O00186	592 aa		11.47	□□□□□ -0.57
SPOP-222	ENST00000577134	SLC25A27	O95847	323 aa		11.47	□□□□□ -0.57
SPOP-222	ENST00000577134	HSP90AA1	P07900	732 aa	Known RBP	11.47	□□□□□ -0.57
SPOP-222	ENST00000577134	CCNA1	P78396	465 aa		11.47	□□□□□ -0.57
SPOP-222	ENST00000577134	HMGN5	P82970	282 aa	Known RBP	11.47	□□□□□ -0.57
SPOP-222	ENST00000577134	TKFC	Q3LXA3	575 aa		11.47	□□□□□ -0.57
SPOP-222	ENST00000577134	WDR78	Q5VTH9	848 aa		11.47	□□□□□ -0.57
SPOP-222	ENST00000577134	JMY	Q8N9B5	988 aa		11.47	□□□□□ -0.57
SPOP-222	ENST00000577134	FAM184A	Q8NB25	1140 aa		11.47	□□□□□ -0.57
SPOP-222	ENST00000577134	WASF1	Q92558	559 aa		11.47	□□□□□ -0.57
SPOP-222	ENST00000577134	GJB4	Q9NTQ9	266 aa		11.47	□□□□□ -0.57
SPOP-222	ENST00000577134	RNF146	Q9NTX7	359 aa		11.47	□□□□□ -0.57
SPOP-222	ENST00000577134	BARHL2	Q9NY43	387 aa		11.47	□□□□□ -0.57
SPOP-222	ENST00000577134	VPS54	Q9P1Q0	977 aa		11.47	□□□□□ -0.57
SPOP-222	ENST00000577134	PNMA2	Q9UL42	364 aa		11.47	□□□□□ -0.57
SPOP-222	ENST00000577134	MRPL11	Q9Y3B7	192 aa	Known RBP	11.47	□□□□□ -0.57
SPOP-222	ENST00000577134	hCG_1984214	I3L0E3	225 aa		11.46	□□□□□ -0.57
SPOP-222	ENST00000577134	GPR25	O00155	361 aa		11.46	□□□□□ -0.57
SPOP-222	ENST00000577134	NAPA	P54920	295 aa		11.46	□□□□□ -0.57
SPOP-222	ENST00000577134	TRAF1	Q13077	416 aa		11.46	□□□□□ -0.57
SPOP-222	ENST00000577134	CCAR1	Q8IX12	1150 aa	Known RBP	11.46	□□□□□ -0.57
SPOP-222	ENST00000577134	ZNF713	Q8N859	430 aa	Predicted RBP	11.46	□□□□□ -0.57
SPOP-222	ENST00000577134	SHCBP1	Q8NEM2	672 aa		11.46	□□□□□ -0.57
SPOP-222	ENST00000577134	CHST13	Q8NET6	341 aa		11.46	□□□□□ -0.57
SPOP-222	ENST00000577134	CLEC4D	Q8WXI8	215 aa		11.46	□□□□□ -0.57
SPOP-222	ENST00000577134	TBC1D5	Q92609	795 aa		11.46	□□□□□ -0.57
SPOP-222	ENST00000577134	ARHGAP39	Q9C0H5	1083 aa		11.46	□□□□□ -0.57
SPOP-222	ENST00000577134	MROH8	Q9H579	483 aa		11.46	□□□□□ -0.57
SPOP-222	ENST00000577134	ACAD9	Q9H845	621 aa		11.46	□□□□□ -0.57
SPOP-222	ENST00000577134	MGAM	O43451	1857 aa		11.46	□□□□□ -0.58
SPOP-222	ENST00000577134	ZSWIM8	A7E2V4	1837 aa		11.46	□□□□□ -0.58
SPOP-222	ENST00000577134	ZNFX1	Q9P2E3	1918 aa	Known RBP	11.45	□□□□□ -0.58
SPOP-222	ENST00000577134	PLXNB2	O15031	1838 aa		11.45	□□□□□ -0.58
SPOP-222	ENST00000577134	SMCO2	A6NFE2	343 aa		11.45	□□□□□ -0.58
SPOP-222	ENST00000577134	NFIB	O00712	420 aa		11.45	□□□□□ -0.58
SPOP-222	ENST00000577134	OPLAH	O14841	1288 aa		11.45	□□□□□ -0.58
SPOP-222	ENST00000577134	CTGF	P29279	349 aa		11.45	□□□□□ -0.58
SPOP-222	ENST00000577134	COPB2	P35606	906 aa		11.45	□□□□□ -0.58
SPOP-222	ENST00000577134	SP3	Q02447	781 aa		11.45	□□□□□ -0.58
SPOP-222	ENST00000577134	GPR142	Q7Z601	462 aa		11.45	□□□□□ -0.58
SPOP-222	ENST00000577134	C8orf76	Q96K31	380 aa		11.45	□□□□□ -0.58
SPOP-222	ENST00000577134	SH3GLB2	Q9NR46	395 aa		11.45	□□□□□ -0.58
SPOP-222	ENST00000577134	KCNJ14	Q9UNX9	436 aa		11.45	□□□□□ -0.58
SPOP-222	ENST00000577134	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.44	□□□□□ -0.58
SPOP-222	ENST00000577134	ADAMTS3	O15072	1205 aa		11.44	□□□□□ -0.58
SPOP-222	ENST00000577134	FKTN	O75072	461 aa		11.44	□□□□□ -0.58
SPOP-222	ENST00000577134	CFB	P00751	764 aa		11.44	□□□□□ -0.58
SPOP-222	ENST00000577134	XBP1	P17861	261 aa		11.44	□□□□□ -0.58
SPOP-222	ENST00000577134	MAPK4	P31152	587 aa		11.44	□□□□□ -0.58
SPOP-222	ENST00000577134	NLRP5	P59047	1200 aa		11.44	□□□□□ -0.58
SPOP-222	ENST00000577134	LACTB	P83111	547 aa	Predicted RBP	11.44	□□□□□ -0.58
SPOP-222	ENST00000577134	CAP1	Q01518	475 aa		11.44	□□□□□ -0.58
SPOP-222	ENST00000577134	GUCY1B3	Q02153	619 aa		11.44	□□□□□ -0.58
SPOP-222	ENST00000577134	KRT40	Q6A162	431 aa		11.44	□□□□□ -0.58
SPOP-222	ENST00000577134	PPP1R18	Q6NYC8	613 aa		11.44	□□□□□ -0.58
SPOP-222	ENST00000577134	NSMF	Q6X4W1	530 aa		11.44	□□□□□ -0.58
SPOP-222	ENST00000577134	PLEKHH3	Q7Z736	793 aa		11.44	□□□□□ -0.58
SPOP-222	ENST00000577134	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.44	□□□□□ -0.58
SPOP-222	ENST00000577134	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.44	□□□□□ -0.58
SPOP-222	ENST00000577134	MMP19	Q99542	508 aa		11.44	□□□□□ -0.58
SPOP-222	ENST00000577134	PHF20	Q9BVI0	1012 aa		11.44	□□□□□ -0.58
SPOP-222	ENST00000577134	PSTPIP2	Q9H939	334 aa		11.44	□□□□□ -0.58
SPOP-222	ENST00000577134	CWC22	Q9HCG8	908 aa	Known RBP	11.44	□□□□□ -0.58
SPOP-222	ENST00000577134	FBXO40	Q9UH90	709 aa		11.44	□□□□□ -0.58
SPOP-222	ENST00000577134	CALML3	P27482	149 aa		11.43	□□□□□ -0.58
SPOP-222	ENST00000577134	HOXA13	P31271	388 aa	Predicted RBP	11.43	□□□□□ -0.58
SPOP-222	ENST00000577134	PSMC4	P43686	418 aa		11.43	□□□□□ -0.58
SPOP-222	ENST00000577134	ADCY7	P51828	1080 aa		11.43	□□□□□ -0.58
SPOP-222	ENST00000577134	FCGRT	P55899	365 aa		11.43	□□□□□ -0.58
SPOP-222	ENST00000577134	BAAT	Q14032	418 aa	Predicted RBP	11.43	□□□□□ -0.58
SPOP-222	ENST00000577134	TRIM29	Q14134	588 aa		11.43	□□□□□ -0.58
SPOP-222	ENST00000577134	KIF22	Q14807	665 aa		11.43	□□□□□ -0.58
SPOP-222	ENST00000577134	UBE2S	Q16763	222 aa		11.43	□□□□□ -0.58
SPOP-222	ENST00000577134	LARP1B	Q659C4	914 aa	Known RBP	11.43	□□□□□ -0.58
SPOP-222	ENST00000577134	USP17L6P	Q6QN14	398 aa		11.43	□□□□□ -0.58
SPOP-222	ENST00000577134	RNF207	Q6ZRF8	634 aa		11.43	□□□□□ -0.58
SPOP-222	ENST00000577134	MCF2L2	Q86YR7	1114 aa		11.43	□□□□□ -0.58
SPOP-222	ENST00000577134	ANKRD35	Q8N283	1001 aa		11.43	□□□□□ -0.58
SPOP-222	ENST00000577134	CCDC148	Q8NFR7	591 aa		11.43	□□□□□ -0.58
SPOP-222	ENST00000577134	CD99L2	Q8TCZ2	262 aa		11.43	□□□□□ -0.58
SPOP-222	ENST00000577134	ZMYND12	Q9H0C1	365 aa		11.43	□□□□□ -0.58
SPOP-222	ENST00000577134	C6orf50	Q9HD87	102 aa		11.43	□□□□□ -0.58
SPOP-222	ENST00000577134	RIC8A	Q9NPQ8	531 aa		11.43	□□□□□ -0.58
SPOP-222	ENST00000577134	A1CF	Q9NQ94	594 aa	Known RBP	11.43	□□□□□ -0.58
SPOP-222	ENST00000577134	KIF3A	Q9Y496	699 aa		11.43	□□□□□ -0.58
SPOP-222	ENST00000577134	IVNS1ABP	Q9Y6Y0	642 aa		11.43	□□□□□ -0.58
SPOP-222	ENST00000577134	DOCK3	Q8IZD9	2030 aa		11.42	□□□□□ -0.58
SPOP-222	ENST00000577134	ESYT2	A0FGR8	921 aa		11.42	□□□□□ -0.58
SPOP-222	ENST00000577134	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.42	□□□□□ -0.58
SPOP-222	ENST00000577134	MEIS2	O14770	477 aa		11.42	□□□□□ -0.58
SPOP-222	ENST00000577134	TNPO2	O14787	897 aa	Known RBP	11.42	□□□□□ -0.58
SPOP-222	ENST00000577134	FOXN1	O15353	648 aa		11.42	□□□□□ -0.58
SPOP-222	ENST00000577134	STRN	O43815	780 aa		11.42	□□□□□ -0.58
SPOP-222	ENST00000577134	PGK2	P07205	417 aa		11.42	□□□□□ -0.58
SPOP-222	ENST00000577134	POLR2M	P0CAP2	368 aa		11.42	□□□□□ -0.58
SPOP-222	ENST00000577134	HSPA1A	P0DMV8	641 aa	Known RBP	11.42	□□□□□ -0.58
SPOP-222	ENST00000577134	HSPA1B	P0DMV9	641 aa	Known RBP	11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms