RNA–Protein interactions for RNA: ENST00000576668.1

ABR-234, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-234ENST00000576668 FTOQ9C0B1 505 aaKnown RBP eCLIP19.41■□□□□ 0.7
ABR-234ENST00000576668 ADAMTS5Q9UNA0 930 aa19.41■□□□□ 0.7
ABR-234ENST00000576668 AGTPBP1Q9UPW5 1226 aa19.41■□□□□ 0.7
ABR-234ENST00000576668 VWA5AO00534 786 aa19.4■□□□□ 0.7
ABR-234ENST00000576668 OPLAHO14841 1288 aa19.4■□□□□ 0.7
ABR-234ENST00000576668 ICAM1P05362 532 aa19.4■□□□□ 0.7
ABR-234ENST00000576668 GNA11P29992 359 aa19.4■□□□□ 0.7
ABR-234ENST00000576668 HOXA7P31268 230 aaPredicted RBP19.4■□□□□ 0.7
ABR-234ENST00000576668 KRT85P78386 507 aa19.4■□□□□ 0.7
ABR-234ENST00000576668 SPRYD7Q5W111 196 aa19.4■□□□□ 0.7
ABR-234ENST00000576668 GPAT2Q6NUI2 795 aa19.4■□□□□ 0.7
ABR-234ENST00000576668 MS4A4AQ96JQ5 239 aa19.4■□□□□ 0.7
ABR-234ENST00000576668 USP28Q96RU2 1077 aa19.4■□□□□ 0.7
ABR-234ENST00000576668 ZIC5Q96T25 663 aa19.4■□□□□ 0.7
ABR-234ENST00000576668 RIC8AQ9NPQ8 531 aa19.4■□□□□ 0.7
ABR-234ENST00000576668 PCDHA6Q9UN73 950 aa19.4■□□□□ 0.7
ABR-234ENST00000576668 PCDHA8Q9Y5H6 950 aa19.4■□□□□ 0.7
ABR-234ENST00000576668 FIBPO43427 364 aa19.39■□□□□ 0.69
ABR-234ENST00000576668 FDX1P10109 184 aa19.39■□□□□ 0.69
ABR-234ENST00000576668 CTCFP49711 727 aaPredicted RBP19.39■□□□□ 0.69
ABR-234ENST00000576668 MKRN3Q13064 507 aaKnown RBP19.39■□□□□ 0.69
ABR-234ENST00000576668 COG2Q14746 738 aa19.39■□□□□ 0.69
ABR-234ENST00000576668 FASTKD5Q7L8L6 764 aaKnown RBP19.39■□□□□ 0.69
ABR-234ENST00000576668 RASAL3Q86YV0 1011 aa19.39■□□□□ 0.69
ABR-234ENST00000576668 TMEM87AQ8NBN3 555 aa19.39■□□□□ 0.69
ABR-234ENST00000576668 GDPD2Q9HCC8 539 aa19.39■□□□□ 0.69
ABR-234ENST00000576668 ABCB11O95342 1321 aa19.38■□□□□ 0.69
ABR-234ENST00000576668 SLC10A3P09131 477 aa19.38■□□□□ 0.69
ABR-234ENST00000576668 ZBTB48P10074 688 aaPredicted RBP19.38■□□□□ 0.69
ABR-234ENST00000576668 NCLP19338 710 aaKnown RBP19.38■□□□□ 0.69
ABR-234ENST00000576668 CLK2P49760 499 aaKnown RBP19.38■□□□□ 0.69
ABR-234ENST00000576668 TOB1P50616 345 aaPredicted RBP19.38■□□□□ 0.69
ABR-234ENST00000576668 UBE2SQ16763 222 aa19.38■□□□□ 0.69
ABR-234ENST00000576668 COL13A1Q5TAT6 717 aaPredicted RBP19.38■□□□□ 0.69
ABR-234ENST00000576668 POTEEQ6S8J3 1075 aa19.38■□□□□ 0.69
ABR-234ENST00000576668 PIK3AP1Q6ZUJ8 805 aa19.38■□□□□ 0.69
ABR-234ENST00000576668 REXO1Q8N1G1 1221 aaKnown RBP19.38■□□□□ 0.69
ABR-234ENST00000576668 CUL5Q93034 780 aa19.38■□□□□ 0.69
ABR-234ENST00000576668 AGBL1Q96MI9 1066 aa19.38■□□□□ 0.69
ABR-234ENST00000576668 ZNF396Q96N95 335 aaPredicted RBP19.38■□□□□ 0.69
ABR-234ENST00000576668 BEGAINQ9BUH8 593 aa19.38■□□□□ 0.69
ABR-234ENST00000576668 RAVER2Q9HCJ3 691 aaKnown RBP19.38■□□□□ 0.69
ABR-234ENST00000576668 TMEM260Q9NX78 707 aa19.38■□□□□ 0.69
ABR-234ENST00000576668 TFIP11Q9UBB9 837 aaKnown RBP19.38■□□□□ 0.69
ABR-234ENST00000576668 CCPG1Q9ULG6 757 aa19.38■□□□□ 0.69
ABR-234ENST00000576668 ZBED4O75132 1171 aa19.37■□□□□ 0.69
ABR-234ENST00000576668 GTF2A2P52657 109 aa19.37■□□□□ 0.69
ABR-234ENST00000576668 TRAF1Q13077 416 aa19.37■□□□□ 0.69
ABR-234ENST00000576668 ATL3Q6DD88 541 aa19.37■□□□□ 0.69
ABR-234ENST00000576668 BICD2Q8TD16 824 aa19.37■□□□□ 0.69
ABR-234ENST00000576668 BRI3BPQ8WY22 251 aa19.37■□□□□ 0.69
ABR-234ENST00000576668 ASCC2Q9H1I8 757 aaPredicted RBP19.37■□□□□ 0.69
ABR-234ENST00000576668 ZNF214Q9UL59 606 aaPredicted RBP19.37■□□□□ 0.69
ABR-234ENST00000576668 CCL15-CCL14A0A0B4J2E2 113 aa19.36■□□□□ 0.69
ABR-234ENST00000576668 WNT7AO00755 349 aa19.36■□□□□ 0.69
ABR-234ENST00000576668 CETPP11597 493 aa19.36■□□□□ 0.69
ABR-234ENST00000576668 OAZ1P54368 228 aa19.36■□□□□ 0.69
ABR-234ENST00000576668 NBR1Q14596 966 aa19.36■□□□□ 0.69
ABR-234ENST00000576668 CCL15Q16663 113 aa19.36■□□□□ 0.69
ABR-234ENST00000576668 JAKMIP3Q5VZ66 844 aa19.36■□□□□ 0.69
ABR-234ENST00000576668 KRT25Q7Z3Z0 450 aa19.36■□□□□ 0.69
ABR-234ENST00000576668 CPXCR1Q8N123 301 aa19.36■□□□□ 0.69
ABR-234ENST00000576668 PSTPIP2Q9H939 334 aa19.36■□□□□ 0.69
ABR-234ENST00000576668 POLR3EQ9NVU0 708 aa19.36■□□□□ 0.69
ABR-234ENST00000576668 BIN2Q9UBW5 565 aaPredicted RBP19.36■□□□□ 0.69
ABR-234ENST00000576668 CLIC4Q9Y696 253 aa19.36■□□□□ 0.69
ABR-234ENST00000576668 CCDC194A0A1B0GVG4 234 aa19.35■□□□□ 0.69
ABR-234ENST00000576668 DDX11L8A8MPP1 907 aa19.35■□□□□ 0.69
ABR-234ENST00000576668 MEIS2O14770 477 aa19.35■□□□□ 0.69
ABR-234ENST00000576668 ATP2A1O14983 1001 aa19.35■□□□□ 0.69
ABR-234ENST00000576668 NASPP49321 788 aaPredicted RBP19.35■□□□□ 0.69
ABR-234ENST00000576668 MRPL12P52815 198 aaKnown RBP19.35■□□□□ 0.69
ABR-234ENST00000576668 IRX3P78415 501 aaPredicted RBP19.35■□□□□ 0.69
ABR-234ENST00000576668 CEBPZQ03701 1054 aaKnown RBP19.35■□□□□ 0.69
ABR-234ENST00000576668 TMEM132BQ14DG7 1078 aa19.35■□□□□ 0.69
ABR-234ENST00000576668 RILPL1Q5EBL4 403 aa19.35■□□□□ 0.69
ABR-234ENST00000576668 ANO1Q5XXA6 986 aa19.35■□□□□ 0.69
ABR-234ENST00000576668 LBX2Q6XYB7 198 aa19.35■□□□□ 0.69
ABR-234ENST00000576668 LEO1Q8WVC0 666 aaPredicted RBP19.35■□□□□ 0.69
ABR-234ENST00000576668 CLEC4DQ8WXI8 215 aa19.35■□□□□ 0.69
ABR-234ENST00000576668 PGBD1Q96JS3 809 aa19.35■□□□□ 0.69
ABR-234ENST00000576668 P2RX7Q99572 595 aaKnown RBP19.35■□□□□ 0.69
ABR-234ENST00000576668 GLT8D2Q9H1C3 349 aa19.35■□□□□ 0.69
ABR-234ENST00000576668 PRDM10Q9NQV6 1147 aa19.35■□□□□ 0.69
ABR-234ENST00000576668 LMBRD1Q9NUN5 540 aa19.35■□□□□ 0.69
ABR-234ENST00000576668 HOXC10Q9NYD6 342 aa19.35■□□□□ 0.69
ABR-234ENST00000576668 RTEL1Q9NZ71 1219 aa19.35■□□□□ 0.69
ABR-234ENST00000576668 MRPL11Q9Y3B7 192 aaKnown RBP19.35■□□□□ 0.69
ABR-234ENST00000576668 CTDP1Q9Y5B0 961 aaPredicted RBP19.35■□□□□ 0.69
ABR-234ENST00000576668 HSPA8P11142 646 aaKnown RBP19.34■□□□□ 0.69
ABR-234ENST00000576668 LBX1P52954 281 aa19.34■□□□□ 0.69
ABR-234ENST00000576668 HERVK_113P62684 666 aa19.34■□□□□ 0.69
ABR-234ENST00000576668 PABPC4Q13310 644 aaKnown RBP eCLIP19.34■□□□□ 0.69
ABR-234ENST00000576668 USP17L6PQ6QN14 398 aa19.34■□□□□ 0.69
ABR-234ENST00000576668 SCAND2PQ9GZW5 306 aaPredicted RBP19.34■□□□□ 0.69
ABR-234ENST00000576668 CFAP45Q9UL16 551 aa19.34■□□□□ 0.69
ABR-234ENST00000576668 PNMA2Q9UL42 364 aa19.34■□□□□ 0.69
ABR-234ENST00000576668 NOL7Q9UMY1 257 aaKnown RBP19.34■□□□□ 0.69
ABR-234ENST00000576668 ELP1O95163 1332 aa19.33■□□□□ 0.69
ABR-234ENST00000576668 BTBD19C9JJ37 291 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms