RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 IQCEQ6IPM2 695 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 SPATA5Q8NB90 893 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.16■□□□□ 0.18
SCARF1-209ENST00000576012 UIMC1Q96RL1 719 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 NLRC4Q9NPP4 1024 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 PRDM11Q9NQV5 511 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 STIM2Q9P246 746 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 TRMT112Q9UI30 125 aaKnown RBP16.16■□□□□ 0.18
SCARF1-209ENST00000576012 SALL4Q9UJQ4 1053 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 RIPOR2Q9Y4F9 1068 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 STRCP1A6NGW2 1772 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 STK36Q9NRP7 1315 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 ANKRD18BA2A2Z9 1011 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 LRRC10BA6NIK2 292 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 TMOD1P28289 359 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 SWT1Q5T5J6 900 aaKnown RBP16.16■□□□□ 0.18
SCARF1-209ENST00000576012 PDXDC2PQ6P474 469 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 AMOTL1Q8IY63 956 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 KRT12Q99456 494 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 TANGO6Q9C0B7 1094 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 EXOC1Q9NV70 894 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 CEP83Q9Y592 693 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 SEMA3EO15041 775 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 HEXIM1O94992 359 aaKnown RBP16.16■□□□□ 0.18
SCARF1-209ENST00000576012 FCER1AP12319 257 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 PSEN1P49768 467 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 CDR1P51861 262 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 HAUS3Q68CZ6 603 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 RRAGAQ7L523 313 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 ELOA2Q8IYF1 753 aaPredicted RBP16.16■□□□□ 0.18
SCARF1-209ENST00000576012 EHBP1Q8NDI1 1231 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 FERMT2Q96AC1 680 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 DNAJC7Q99615 494 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 GOLPH3Q9H4A6 298 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 CNNM2Q9H8M5 875 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 H7C1D1 291 aa16.15■□□□□ 0.18
SCARF1-209ENST00000576012 USO1O60763 962 aaKnown RBP16.15■□□□□ 0.18
SCARF1-209ENST00000576012 SKAP2O75563 359 aaPredicted RBP16.15■□□□□ 0.18
SCARF1-209ENST00000576012 VAV2P52735 878 aa16.15■□□□□ 0.18
SCARF1-209ENST00000576012 GFPT1Q06210 699 aaPredicted RBP16.15■□□□□ 0.18
SCARF1-209ENST00000576012 B4GALNT4Q76KP1 1039 aa16.15■□□□□ 0.18
SCARF1-209ENST00000576012 ZNF473Q8WTR7 871 aaKnown RBP16.15■□□□□ 0.18
SCARF1-209ENST00000576012 CNOT6LQ96LI5 555 aaKnown RBP16.15■□□□□ 0.18
SCARF1-209ENST00000576012 MST1RQ04912 1400 aa16.15■□□□□ 0.18
SCARF1-209ENST00000576012 GOLGA6L7A0A1B0GV03 622 aa16.15■□□□□ 0.18
SCARF1-209ENST00000576012 ZNF233A6NK53 670 aa16.15■□□□□ 0.18
SCARF1-209ENST00000576012 TBC1D31Q96DN5 1066 aa16.15■□□□□ 0.18
SCARF1-209ENST00000576012 CCT8L2Q96SF2 557 aa16.15■□□□□ 0.18
SCARF1-209ENST00000576012 SH3GL2Q99962 352 aa16.15■□□□□ 0.18
SCARF1-209ENST00000576012 PCDHA13Q9Y5I0 950 aa16.15■□□□□ 0.18
SCARF1-209ENST00000576012 TCRBV5S4A2TA0A5A2 114 aa16.14■□□□□ 0.18
SCARF1-209ENST00000576012 WTIPA6NIX2 430 aaPredicted RBP16.14■□□□□ 0.18
SCARF1-209ENST00000576012 RASSF10A6NK89 507 aa16.14■□□□□ 0.18
SCARF1-209ENST00000576012 PSMA7O14818 248 aa16.14■□□□□ 0.18
SCARF1-209ENST00000576012 NR1D1P20393 614 aa16.14■□□□□ 0.18
SCARF1-209ENST00000576012 KCNA4P22459 653 aa16.14■□□□□ 0.18
SCARF1-209ENST00000576012 CYP7A1P22680 504 aa16.14■□□□□ 0.18
SCARF1-209ENST00000576012 UBA7P41226 1012 aa16.14■□□□□ 0.18
SCARF1-209ENST00000576012 CATIPQ7Z7H3 387 aa16.14■□□□□ 0.18
SCARF1-209ENST00000576012 ENAHQ8N8S7 591 aaPredicted RBP16.14■□□□□ 0.18
SCARF1-209ENST00000576012 ZKSCAN4Q969J2 545 aaPredicted RBP16.14■□□□□ 0.18
SCARF1-209ENST00000576012 PPP1R12BO60237 982 aaPredicted RBP16.14■□□□□ 0.17
SCARF1-209ENST00000576012 PDE8BO95263 885 aa16.14■□□□□ 0.17
SCARF1-209ENST00000576012 PCCAP05165 728 aaPredicted RBP16.14■□□□□ 0.17
SCARF1-209ENST00000576012 FECHP22830 423 aa16.14■□□□□ 0.17
SCARF1-209ENST00000576012 EPHB4P54760 987 aa16.14■□□□□ 0.17
SCARF1-209ENST00000576012 SPRED3Q2MJR0 410 aa16.14■□□□□ 0.17
SCARF1-209ENST00000576012 DDX42Q86XP3 938 aaKnown RBP eCLIP16.14■□□□□ 0.17
SCARF1-209ENST00000576012 PHF20Q9BVI0 1012 aa16.14■□□□□ 0.17
SCARF1-209ENST00000576012 MAGEA1P43355 309 aa16.14■□□□□ 0.17
SCARF1-209ENST00000576012 CCDC40Q4G0X9 1142 aa16.14■□□□□ 0.17
SCARF1-209ENST00000576012 PRPF38AQ8NAV1 312 aaKnown RBP16.14■□□□□ 0.17
SCARF1-209ENST00000576012 RPGRIP1Q96KN7 1286 aa16.14■□□□□ 0.17
SCARF1-209ENST00000576012 SLC39A2Q9NP94 309 aa16.14■□□□□ 0.17
SCARF1-209ENST00000576012 KLC4Q9NSK0 619 aa16.14■□□□□ 0.17
SCARF1-209ENST00000576012 JAG2Q9Y219 1238 aa16.14■□□□□ 0.17
SCARF1-209ENST00000576012 NF2P35240 595 aa16.13■□□□□ 0.17
SCARF1-209ENST00000576012 KIF11P52732 1056 aa16.13■□□□□ 0.17
SCARF1-209ENST00000576012 PDE4DQ08499 809 aa16.13■□□□□ 0.17
SCARF1-209ENST00000576012 ANKRD40Q6AI12 368 aa16.13■□□□□ 0.17
SCARF1-209ENST00000576012 CCDC13Q8IYE1 715 aa16.13■□□□□ 0.17
SCARF1-209ENST00000576012 ADSSL1Q8N142 457 aa16.13■□□□□ 0.17
SCARF1-209ENST00000576012 SPATA31A3Q5VYP0 1347 aa16.13■□□□□ 0.17
SCARF1-209ENST00000576012 IRS4O14654 1257 aaPredicted RBP16.13■□□□□ 0.17
SCARF1-209ENST00000576012 OPLAHO14841 1288 aa16.13■□□□□ 0.17
SCARF1-209ENST00000576012 GSCP56915 257 aaPredicted RBP16.13■□□□□ 0.17
SCARF1-209ENST00000576012 ASIC1P78348 528 aa16.13■□□□□ 0.17
SCARF1-209ENST00000576012 PPP2R5AQ15172 486 aa16.13■□□□□ 0.17
SCARF1-209ENST00000576012 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.13■□□□□ 0.17
SCARF1-209ENST00000576012 HAUS2Q9NVX0 235 aa16.13■□□□□ 0.17
SCARF1-209ENST00000576012 ARHGAP20Q9P2F6 1191 aa16.13■□□□□ 0.17
SCARF1-209ENST00000576012 FNTAP49354 379 aa16.13■□□□□ 0.17
SCARF1-209ENST00000576012 DNM2P50570 870 aa16.13■□□□□ 0.17
SCARF1-209ENST00000576012 DYNLL1P63167 89 aaKnown RBP16.13■□□□□ 0.17
SCARF1-209ENST00000576012 CHADLQ6NUI6 762 aa16.13■□□□□ 0.17
SCARF1-209ENST00000576012 DNAJC10Q8IXB1 793 aa16.13■□□□□ 0.17
SCARF1-209ENST00000576012 TRIM58Q8NG06 486 aa16.13■□□□□ 0.17
SCARF1-209ENST00000576012 ODF2LQ9ULJ1 636 aa16.13■□□□□ 0.17
SCARF1-209ENST00000576012 ATP2C1P98194 919 aaPredicted RBP16.12■□□□□ 0.17
SCARF1-209ENST00000576012 EHHADHQ08426 723 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms