RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 MKNK2Q9HBH9 465 aa19.5■□□□□ 0.71
CTDNEP1-211ENST00000575783 PDGFCQ9NRA1 345 aa19.5■□□□□ 0.71
CTDNEP1-211ENST00000575783 TRMT13Q9NUP7 481 aaKnown RBP19.5■□□□□ 0.71
CTDNEP1-211ENST00000575783 PAG1Q9NWQ8 432 aa19.5■□□□□ 0.71
CTDNEP1-211ENST00000575783 NYAP2Q9P242 653 aa19.5■□□□□ 0.71
CTDNEP1-211ENST00000575783 SOWAHBA6NEL2 793 aa19.49■□□□□ 0.71
CTDNEP1-211ENST00000575783 ASB14A6NK59 587 aa19.49■□□□□ 0.71
CTDNEP1-211ENST00000575783 ARHGEF15O94989 841 aa19.49■□□□□ 0.71
CTDNEP1-211ENST00000575783 IFIT2P09913 472 aaKnown RBP19.49■□□□□ 0.71
CTDNEP1-211ENST00000575783 ACTN1P12814 892 aa19.49■□□□□ 0.71
CTDNEP1-211ENST00000575783 TAP1Q03518 808 aa19.49■□□□□ 0.71
CTDNEP1-211ENST00000575783 TMEM63BQ5T3F8 832 aa19.49■□□□□ 0.71
CTDNEP1-211ENST00000575783 EEPD1Q7L9B9 569 aa19.49■□□□□ 0.71
CTDNEP1-211ENST00000575783 CLASRPQ8N2M8 674 aaKnown RBP19.49■□□□□ 0.71
CTDNEP1-211ENST00000575783 FAM133AQ8N9E0 248 aa19.49■□□□□ 0.71
CTDNEP1-211ENST00000575783 CD320Q9NPF0 282 aa19.49■□□□□ 0.71
CTDNEP1-211ENST00000575783 FEM1BQ9UK73 627 aa19.49■□□□□ 0.71
CTDNEP1-211ENST00000575783 PI4K2BG5E9Z4 385 aa19.48■□□□□ 0.71
CTDNEP1-211ENST00000575783 SUPT20HL2P0C7V6 817 aa19.48■□□□□ 0.71
CTDNEP1-211ENST00000575783 RASA1P20936 1047 aa19.48■□□□□ 0.71
CTDNEP1-211ENST00000575783 GRB10Q13322 594 aa19.48■□□□□ 0.71
CTDNEP1-211ENST00000575783 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.48■□□□□ 0.714e-6■□□□□ 11.1
CTDNEP1-211ENST00000575783 BOLA2Q9H3K6 86 aa19.48■□□□□ 0.71
CTDNEP1-211ENST00000575783 ACAD9Q9H845 621 aa19.48■□□□□ 0.71
CTDNEP1-211ENST00000575783 ISY1Q9ULR0 285 aaKnown RBP19.48■□□□□ 0.71
CTDNEP1-211ENST00000575783 COG6Q9Y2V7 657 aa19.48■□□□□ 0.71
CTDNEP1-211ENST00000575783 GBF1Q92538 1859 aa19.48■□□□□ 0.71
CTDNEP1-211ENST00000575783 KIF28PB7ZC32 967 aa19.47■□□□□ 0.71
CTDNEP1-211ENST00000575783 OAZ1P54368 228 aa19.47■□□□□ 0.71
CTDNEP1-211ENST00000575783 HSP90AB4PQ58FF6 505 aa19.47■□□□□ 0.71
CTDNEP1-211ENST00000575783 IQSEC1Q6DN90 963 aa19.47■□□□□ 0.71
CTDNEP1-211ENST00000575783 SLC9A7Q96T83 725 aa19.47■□□□□ 0.71
CTDNEP1-211ENST00000575783 FTOQ9C0B1 505 aaKnown RBP eCLIP19.47■□□□□ 0.71
CTDNEP1-211ENST00000575783 A1CFQ9NQ94 594 aaKnown RBP19.47■□□□□ 0.71
CTDNEP1-211ENST00000575783 MUC6Q6W4X9 2439 aa19.46■□□□□ 0.71
CTDNEP1-211ENST00000575783 HERC6Q8IVU3 1022 aa19.46■□□□□ 0.71
CTDNEP1-211ENST00000575783 FBXO16Q8IX29 292 aaPredicted RBP19.46■□□□□ 0.71
CTDNEP1-211ENST00000575783 PHOSPHO2Q8TCD6 241 aa19.46■□□□□ 0.71
CTDNEP1-211ENST00000575783 UIMC1Q96RL1 719 aa19.46■□□□□ 0.71
CTDNEP1-211ENST00000575783 RNF146Q9NTX7 359 aa19.46■□□□□ 0.71
CTDNEP1-211ENST00000575783 TNKSO95271 1327 aa19.46■□□□□ 0.71
CTDNEP1-211ENST00000575783 MINDY4BA8MYZ0 360 aa19.45■□□□□ 0.7
CTDNEP1-211ENST00000575783 TAPT1Q6NXT6 567 aa19.45■□□□□ 0.7
CTDNEP1-211ENST00000575783 KIAA1211Q6ZU35 1233 aa19.45■□□□□ 0.7
CTDNEP1-211ENST00000575783 SPRED2Q7Z698 418 aa19.45■□□□□ 0.7
CTDNEP1-211ENST00000575783 CHMP4CQ96CF2 233 aa19.45■□□□□ 0.7
CTDNEP1-211ENST00000575783 PUS7LQ9H0K6 701 aaKnown RBP19.45■□□□□ 0.7
CTDNEP1-211ENST00000575783 ARPP21Q9UBL0 812 aaPredicted RBP19.45■□□□□ 0.7
CTDNEP1-211ENST00000575783 ZBED9Q6R2W3 1325 aa19.45■□□□□ 0.7
CTDNEP1-211ENST00000575783 RLBP1P12271 317 aa19.44■□□□□ 0.7
CTDNEP1-211ENST00000575783 UBE3CQ15386 1083 aa19.44■□□□□ 0.7
CTDNEP1-211ENST00000575783 FAM47CQ5HY64 1035 aa19.44■□□□□ 0.7
CTDNEP1-211ENST00000575783 LRRC47Q8N1G4 583 aaKnown RBP19.44■□□□□ 0.7
CTDNEP1-211ENST00000575783 Q9Y3F1 56 aa19.44■□□□□ 0.7
CTDNEP1-211ENST00000575783 PRR33A8MZF0 331 aa19.43■□□□□ 0.7
CTDNEP1-211ENST00000575783 TMEM232C9JQI7 657 aa19.43■□□□□ 0.7
CTDNEP1-211ENST00000575783 LPXNO60711 386 aa19.43■□□□□ 0.7
CTDNEP1-211ENST00000575783 MYL3P08590 195 aa19.43■□□□□ 0.7
CTDNEP1-211ENST00000575783 BMP3P12645 472 aa19.43■□□□□ 0.7
CTDNEP1-211ENST00000575783 ALAS1P13196 640 aa19.43■□□□□ 0.7
CTDNEP1-211ENST00000575783 IKQ13123 557 aaPredicted RBP19.43■□□□□ 0.7
CTDNEP1-211ENST00000575783 SLFN13Q68D06 897 aa19.43■□□□□ 0.7
CTDNEP1-211ENST00000575783 RETREG2Q8NC44 543 aa19.43■□□□□ 0.7
CTDNEP1-211ENST00000575783 PPP1R13LQ8WUF5 828 aa19.43■□□□□ 0.7
CTDNEP1-211ENST00000575783 MKL1Q969V6 931 aa19.43■□□□□ 0.7
CTDNEP1-211ENST00000575783 KIF1BPQ96EK5 621 aa19.43■□□□□ 0.7
CTDNEP1-211ENST00000575783 TRERF1Q96PN7 1200 aa19.43■□□□□ 0.7
CTDNEP1-211ENST00000575783 PRDM1O75626 825 aa19.42■□□□□ 0.7
CTDNEP1-211ENST00000575783 RFC2P35250 354 aa19.42■□□□□ 0.7
CTDNEP1-211ENST00000575783 MRE11P49959 708 aa19.42■□□□□ 0.7
CTDNEP1-211ENST00000575783 ZNF444Q8N0Y2 327 aaPredicted RBP19.42■□□□□ 0.7
CTDNEP1-211ENST00000575783 GJD3Q8N144 294 aa19.42■□□□□ 0.7
CTDNEP1-211ENST00000575783 CEP95Q96GE4 821 aa19.42■□□□□ 0.7
CTDNEP1-211ENST00000575783 GPHNQ9NQX3 736 aaPredicted RBP19.42■□□□□ 0.7
CTDNEP1-211ENST00000575783 POLR3EQ9NVU0 708 aa19.42■□□□□ 0.7
CTDNEP1-211ENST00000575783 MYH8P13535 1937 aa19.42■□□□□ 0.7
CTDNEP1-211ENST00000575783 LRRC37A2A6NM11 1700 aa19.42■□□□□ 0.7
CTDNEP1-211ENST00000575783 BAZ2AQ9UIF9 1905 aaKnown RBP19.41■□□□□ 0.7
CTDNEP1-211ENST00000575783 MCM3APO60318 1980 aa19.41■□□□□ 0.7
CTDNEP1-211ENST00000575783 IGKV6D-41A0A0C4DH26 115 aa19.41■□□□□ 0.7
CTDNEP1-211ENST00000575783 IQCF3P0C7M6 154 aa19.41■□□□□ 0.7
CTDNEP1-211ENST00000575783 FDX1P10109 184 aa19.41■□□□□ 0.7
CTDNEP1-211ENST00000575783 SSTR3P32745 418 aaPredicted RBP19.41■□□□□ 0.7
CTDNEP1-211ENST00000575783 SNAP25P60880 206 aa19.41■□□□□ 0.7
CTDNEP1-211ENST00000575783 SBK1Q52WX2 424 aa19.41■□□□□ 0.7
CTDNEP1-211ENST00000575783 GDPD5Q8WTR4 605 aa19.41■□□□□ 0.7
CTDNEP1-211ENST00000575783 PURBQ96QR8 312 aaKnown RBP19.41■□□□□ 0.7
CTDNEP1-211ENST00000575783 HAUS7Q99871 368 aa19.41■□□□□ 0.7
CTDNEP1-211ENST00000575783 MTMR4Q9NYA4 1195 aa19.41■□□□□ 0.7
CTDNEP1-211ENST00000575783 WDFY4Q6ZS81 3184 aa19.4■□□□□ 0.7
CTDNEP1-211ENST00000575783 LCHNA4D1U4 455 aa19.4■□□□□ 0.7
CTDNEP1-211ENST00000575783 TTLL1O95922 423 aa19.4■□□□□ 0.7
CTDNEP1-211ENST00000575783 ATP5JP18859 108 aa19.4■□□□□ 0.7
CTDNEP1-211ENST00000575783 KCNJ6P48051 423 aa19.4■□□□□ 0.7
CTDNEP1-211ENST00000575783 STAT2P52630 851 aa19.4■□□□□ 0.7
CTDNEP1-211ENST00000575783 PURAQ00577 322 aaKnown RBP19.4■□□□□ 0.7
CTDNEP1-211ENST00000575783 NBPF20Q3BBV1 942 aa19.4■□□□□ 0.7
CTDNEP1-211ENST00000575783 TKFCQ3LXA3 575 aa19.4■□□□□ 0.7
CTDNEP1-211ENST00000575783 DUSP28Q4G0W2 176 aa19.4■□□□□ 0.7
CTDNEP1-211ENST00000575783 ZSCAN25Q6NSZ9 544 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms