RNA–Protein interactions for RNA: ENST00000575707.5

TRAP1-213, Transcript of TNF receptor associated protein 1, humanhuman

TSL 5

Gene TRAP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-213ENST00000575707 MTMR10Q9NXD2 777 aa19.47■□□□□ 0.71
TRAP1-213ENST00000575707 CYP39A1Q9NYL5 469 aa19.47■□□□□ 0.71
TRAP1-213ENST00000575707 ELP1O95163 1332 aa19.47■□□□□ 0.71
TRAP1-213ENST00000575707 LCTP09848 1927 aa19.47■□□□□ 0.71
TRAP1-213ENST00000575707 PDHBP11177 359 aa19.46■□□□□ 0.71
TRAP1-213ENST00000575707 NT5C2P49902 561 aa19.46■□□□□ 0.71
TRAP1-213ENST00000575707 NKX3-2P78367 333 aa19.46■□□□□ 0.71
TRAP1-213ENST00000575707 IRX5P78411 483 aaPredicted RBP19.46■□□□□ 0.71
TRAP1-213ENST00000575707 SYDE2Q5VT97 1194 aa19.46■□□□□ 0.71
TRAP1-213ENST00000575707 TBC1D10CQ8IV04 446 aa19.46■□□□□ 0.71
TRAP1-213ENST00000575707 GLT1D1Q96MS3 346 aa19.46■□□□□ 0.71
TRAP1-213ENST00000575707 ASTN1O14525 1302 aa19.46■□□□□ 0.71
TRAP1-213ENST00000575707 COL6A3P12111 3177 aa19.45■□□□□ 0.7
TRAP1-213ENST00000575707 DCDC2CA8MYV0 355 aa19.45■□□□□ 0.7
TRAP1-213ENST00000575707 HIP1O00291 1037 aa19.45■□□□□ 0.7
TRAP1-213ENST00000575707 ASGR1P07306 291 aa19.45■□□□□ 0.7
TRAP1-213ENST00000575707 ITGB8P26012 769 aa19.45■□□□□ 0.7
TRAP1-213ENST00000575707 SLC16A2P36021 539 aa19.45■□□□□ 0.7
TRAP1-213ENST00000575707 FAAP100Q0VG06 881 aa19.45■□□□□ 0.7
TRAP1-213ENST00000575707 SHHQ15465 462 aa19.45■□□□□ 0.7
TRAP1-213ENST00000575707 FAM109BQ6ICB4 259 aaPredicted RBP19.45■□□□□ 0.7
TRAP1-213ENST00000575707 ESR2Q92731 530 aa19.45■□□□□ 0.7
TRAP1-213ENST00000575707 TMEM39AQ9NV64 488 aa19.45■□□□□ 0.7
TRAP1-213ENST00000575707 MROH7Q68CQ1 1323 aa19.45■□□□□ 0.7
TRAP1-213ENST00000575707 FRMPD2Q68DX3 1309 aaPredicted RBP19.45■□□□□ 0.7
TRAP1-213ENST00000575707 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.44■□□□□ 0.7
TRAP1-213ENST00000575707 CTAGE5O15320 804 aa19.44■□□□□ 0.7
TRAP1-213ENST00000575707 SNHG28P0DPA3 235 aa19.44■□□□□ 0.7
TRAP1-213ENST00000575707 RAG1P15918 1043 aa19.44■□□□□ 0.7
TRAP1-213ENST00000575707 TNFAIP2Q03169 654 aa19.44■□□□□ 0.7
TRAP1-213ENST00000575707 ZNF543Q08ER8 600 aa19.44■□□□□ 0.7
TRAP1-213ENST00000575707 GNASQ5JWF2 1037 aa19.44■□□□□ 0.7
TRAP1-213ENST00000575707 C9orf50Q5SZB4 431 aa19.44■□□□□ 0.7
TRAP1-213ENST00000575707 CWC27Q6UX04 472 aaKnown RBP19.44■□□□□ 0.7
TRAP1-213ENST00000575707 NSMFQ6X4W1 530 aa19.44■□□□□ 0.7
TRAP1-213ENST00000575707 GPCPD1Q9NPB8 672 aa19.44■□□□□ 0.7
TRAP1-213ENST00000575707 DIAPH3Q9NSV4 1193 aa19.44■□□□□ 0.7
TRAP1-213ENST00000575707 NEDD4P46934 1319 aa19.44■□□□□ 0.7
TRAP1-213ENST00000575707 ZNF213O14771 459 aa19.43■□□□□ 0.7
TRAP1-213ENST00000575707 CDK7P50613 346 aa19.43■□□□□ 0.7
TRAP1-213ENST00000575707 MORC4Q8TE76 937 aa19.43■□□□□ 0.7
TRAP1-213ENST00000575707 PNMA2Q9UL42 364 aa19.43■□□□□ 0.7
TRAP1-213ENST00000575707 GNEQ9Y223 722 aaKnown RBP19.43■□□□□ 0.7
TRAP1-213ENST00000575707 STXBP5LQ9Y2K9 1186 aa19.43■□□□□ 0.7
TRAP1-213ENST00000575707 LAMA2P24043 3122 aaKnown RBP19.43■□□□□ 0.7
TRAP1-213ENST00000575707 LOC102724159A0A0B4J2E5 919 aa19.42■□□□□ 0.7
TRAP1-213ENST00000575707 A0A0U1RQG5 324 aaPredicted RBP19.42■□□□□ 0.7
TRAP1-213ENST00000575707 PWP2Q15269 919 aaKnown RBP19.42■□□□□ 0.7
TRAP1-213ENST00000575707 DGKHQ86XP1 1220 aa19.42■□□□□ 0.7
TRAP1-213ENST00000575707 DSCC1Q9BVC3 393 aa19.42■□□□□ 0.7
TRAP1-213ENST00000575707 VTA1Q9NP79 307 aa19.42■□□□□ 0.7
TRAP1-213ENST00000575707 TBX21Q9UL17 535 aa19.42■□□□□ 0.7
TRAP1-213ENST00000575707 NFIBO00712 420 aa19.41■□□□□ 0.7
TRAP1-213ENST00000575707 BAATQ14032 418 aaPredicted RBP19.41■□□□□ 0.7
TRAP1-213ENST00000575707 CCDC178Q5BJE1 867 aa19.41■□□□□ 0.7
TRAP1-213ENST00000575707 GPATCH4Q5T3I0 446 aaKnown RBP19.41■□□□□ 0.7
TRAP1-213ENST00000575707 IQSEC1Q6DN90 963 aa19.41■□□□□ 0.7
TRAP1-213ENST00000575707 TAPT1Q6NXT6 567 aa19.41■□□□□ 0.7
TRAP1-213ENST00000575707 NOL8Q76FK4 1167 aaKnown RBP19.41■□□□□ 0.7
TRAP1-213ENST00000575707 TLK2Q86UE8 772 aa19.41■□□□□ 0.7
TRAP1-213ENST00000575707 FBXO16Q8IX29 292 aaPredicted RBP19.41■□□□□ 0.7
TRAP1-213ENST00000575707 VTI1AQ96AJ9 217 aa19.41■□□□□ 0.7
TRAP1-213ENST00000575707 ADD3Q9UEY8 706 aaKnown RBP19.41■□□□□ 0.7
TRAP1-213ENST00000575707 WDR19Q8NEZ3 1342 aa19.41■□□□□ 0.7
TRAP1-213ENST00000575707 ARVCFO00192 962 aa19.4■□□□□ 0.7
TRAP1-213ENST00000575707 TIMP1P01033 207 aa19.4■□□□□ 0.7
TRAP1-213ENST00000575707 SMPD1P17405 629 aa19.4■□□□□ 0.7
TRAP1-213ENST00000575707 BEX3Q00994 111 aa19.4■□□□□ 0.7
TRAP1-213ENST00000575707 FPGSQ05932 587 aa19.4■□□□□ 0.7
TRAP1-213ENST00000575707 PPP4R3CPQ6ZMV5 832 aa19.4■□□□□ 0.7
TRAP1-213ENST00000575707 IQCA1Q86XH1 822 aa19.4■□□□□ 0.7
TRAP1-213ENST00000575707 PURBQ96QR8 312 aaKnown RBP19.4■□□□□ 0.7
TRAP1-213ENST00000575707 ZKSCAN3Q9BRR0 538 aa19.4■□□□□ 0.7
TRAP1-213ENST00000575707 Q9Y3F1 56 aa19.4■□□□□ 0.7
TRAP1-213ENST00000575707 DDX49Q9Y6V7 483 aaKnown RBP19.4■□□□□ 0.7
TRAP1-213ENST00000575707 PTPDC1A2A3K4 754 aa19.39■□□□□ 0.69
TRAP1-213ENST00000575707 KDM4AO75164 1064 aa19.39■□□□□ 0.69
TRAP1-213ENST00000575707 CABYRO75952 493 aa19.39■□□□□ 0.69
TRAP1-213ENST00000575707 ALDH5A1P51649 535 aaPredicted RBP19.39■□□□□ 0.69
TRAP1-213ENST00000575707 EPHB4P54760 987 aa19.39■□□□□ 0.69
TRAP1-213ENST00000575707 SMAD3P84022 425 aaKnown RBP19.39■□□□□ 0.69
TRAP1-213ENST00000575707 FSCN1Q16658 493 aaKnown RBP19.39■□□□□ 0.69
TRAP1-213ENST00000575707 IMMTQ16891 758 aaKnown RBP19.39■□□□□ 0.69
TRAP1-213ENST00000575707 EEPD1Q7L9B9 569 aa19.39■□□□□ 0.69
TRAP1-213ENST00000575707 FAM126BQ8IXS8 530 aa19.39■□□□□ 0.69
TRAP1-213ENST00000575707 SLC17A8Q8NDX2 589 aa19.39■□□□□ 0.69
TRAP1-213ENST00000575707 CLEC4DQ8WXI8 215 aa19.39■□□□□ 0.69
TRAP1-213ENST00000575707 ANKS1AQ92625 1134 aa19.39■□□□□ 0.69
TRAP1-213ENST00000575707 AP5M1Q9H0R1 490 aa19.39■□□□□ 0.69
TRAP1-213ENST00000575707 PDGFCQ9NRA1 345 aa19.39■□□□□ 0.69
TRAP1-213ENST00000575707 ZNF697Q5TEC3 545 aa19.38■□□□□ 0.69
TRAP1-213ENST00000575707 SLC43A3Q8NBI5 491 aa19.38■□□□□ 0.69
TRAP1-213ENST00000575707 CTNNA3Q9UI47 895 aa19.38■□□□□ 0.69
TRAP1-213ENST00000575707 TLR3O15455 904 aaKnown RBP19.37■□□□□ 0.69
TRAP1-213ENST00000575707 DYNC1LI2O43237 492 aaPredicted RBP19.37■□□□□ 0.69
TRAP1-213ENST00000575707 ZEB2O60315 1214 aa19.37■□□□□ 0.69
TRAP1-213ENST00000575707 MFSD5Q6N075 450 aa19.37■□□□□ 0.69
TRAP1-213ENST00000575707 CXCL17Q6UXB2 119 aa19.37■□□□□ 0.69
TRAP1-213ENST00000575707 SLC30A10Q6XR72 485 aa19.37■□□□□ 0.69
TRAP1-213ENST00000575707 RNF207Q6ZRF8 634 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms