RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 BTBD19C9JJ37 291 aa27.56■■■□□ 2
ATPAF1-213ENST00000574428 M0R2N6 131 aa27.56■■■□□ 2
ATPAF1-213ENST00000574428 SLC10A3P09131 477 aa27.56■■■□□ 2
ATPAF1-213ENST00000574428 TMEM132BQ14DG7 1078 aa27.56■■■□□ 2
ATPAF1-213ENST00000574428 POTEEQ6S8J3 1075 aa27.56■■■□□ 2
ATPAF1-213ENST00000574428 PCDHA6Q9UN73 950 aa27.56■■■□□ 2
ATPAF1-213ENST00000574428 PCDHA8Q9Y5H6 950 aa27.56■■■□□ 2
ATPAF1-213ENST00000574428 A0A0G2JMZ2 1700 aa27.56■■■□□ 2
ATPAF1-213ENST00000574428 OPLAHO14841 1288 aa27.55■■■□□ 2
ATPAF1-213ENST00000574428 NCLP19338 710 aaKnown RBP27.55■■■□□ 2
ATPAF1-213ENST00000574428 OSBPP22059 807 aa27.55■■■□□ 2
ATPAF1-213ENST00000574428 HERVK_113P62684 666 aa27.55■■■□□ 2
ATPAF1-213ENST00000574428 UBE2SQ16763 222 aa27.55■■■□□ 2
ATPAF1-213ENST00000574428 MYSM1Q5VVJ2 828 aa27.55■■■□□ 2
ATPAF1-213ENST00000574428 CLEC17AQ6ZS10 378 aa27.55■■■□□ 2
ATPAF1-213ENST00000574428 REXO1Q8N1G1 1221 aaKnown RBP27.55■■■□□ 2
ATPAF1-213ENST00000574428 BICD2Q8TD16 824 aa27.55■■■□□ 2
ATPAF1-213ENST00000574428 GBP4Q96PP9 640 aa27.55■■■□□ 2
ATPAF1-213ENST00000574428 BIN2Q9UBW5 565 aaPredicted RBP27.55■■■□□ 2
ATPAF1-213ENST00000574428 ZNF214Q9UL59 606 aaPredicted RBP27.55■■■□□ 2
ATPAF1-213ENST00000574428 ABCB11O95342 1321 aa27.55■■■□□ 2
ATPAF1-213ENST00000574428 HOMER2Q9NSB8 354 aa27.55■■■□□ 2
ATPAF1-213ENST00000574428 TMEM260Q9NX78 707 aa27.55■■■□□ 2
ATPAF1-213ENST00000574428 PDHXO00330 501 aa27.54■■■□□ 2
ATPAF1-213ENST00000574428 PEX10O60683 326 aa27.54■■■□□ 2
ATPAF1-213ENST00000574428 ALAS1P13196 640 aa27.54■■■□□ 2
ATPAF1-213ENST00000574428 MRPL12P52815 198 aaKnown RBP27.54■■■□□ 2
ATPAF1-213ENST00000574428 PIK3AP1Q6ZUJ8 805 aa27.54■■■□□ 2
ATPAF1-213ENST00000574428 PTPN18Q99952 460 aa27.54■■■□□ 2
ATPAF1-213ENST00000574428 TFIP11Q9UBB9 837 aaKnown RBP27.54■■■□□ 2
ATPAF1-213ENST00000574428 CNPY2Q9Y2B0 182 aa27.54■■■□□ 2
ATPAF1-213ENST00000574428 MRPL11Q9Y3B7 192 aaKnown RBP27.54■■■□□ 2
ATPAF1-213ENST00000574428 FAM155AB1AL88 458 aaPredicted RBP27.53■■■□□ 2
ATPAF1-213ENST00000574428 OAZ1P54368 228 aa27.53■■■□□ 2
ATPAF1-213ENST00000574428 JAKMIP3Q5VZ66 844 aa27.53■■■□□ 2
ATPAF1-213ENST00000574428 SNRNP48Q6IEG0 339 aaKnown RBP27.53■■■□□ 2
ATPAF1-213ENST00000574428 USP17L6PQ6QN14 398 aa27.53■■■□□ 2
ATPAF1-213ENST00000574428 LBX2Q6XYB7 198 aa27.53■■■□□ 2
ATPAF1-213ENST00000574428 ANKRD23Q86SG2 305 aa27.53■■■□□ 2
ATPAF1-213ENST00000574428 FAM43AQ8N2R8 423 aa27.53■■■□□ 2
ATPAF1-213ENST00000574428 FTOQ9C0B1 505 aaKnown RBP eCLIP27.53■■■□□ 2
ATPAF1-213ENST00000574428 CYP2C8P10632 490 aa27.53■■■□□ 2
ATPAF1-213ENST00000574428 PLS1Q14651 629 aa27.53■■■□□ 2
ATPAF1-213ENST00000574428 BTBD7Q9P203 1132 aa27.53■■■□□ 2
ATPAF1-213ENST00000574428 PNMA3Q9UL41 463 aa27.53■■■□□ 2
ATPAF1-213ENST00000574428 PAXIP1Q6ZW49 1069 aaPredicted RBP27.52■■■□□ 2
ATPAF1-213ENST00000574428 CCDC102AQ96A19 550 aa27.52■■■□□ 2
ATPAF1-213ENST00000574428 HHIPL1Q96JK4 782 aa27.52■■■□□ 2
ATPAF1-213ENST00000574428 TEX13BQ9BXU2 312 aa27.52■■■□□ 2
ATPAF1-213ENST00000574428 SLC45A1Q9Y2W3 748 aa27.52■■■□□ 2
ATPAF1-213ENST00000574428 RIPK3Q9Y572 518 aa27.52■■■□□ 2
ATPAF1-213ENST00000574428 CCDC194A0A1B0GVG4 234 aa27.51■■□□□ 1.99
ATPAF1-213ENST00000574428 MANSC4A6NHS7 340 aaPredicted RBP27.51■■□□□ 1.99
ATPAF1-213ENST00000574428 ATP2A1O14983 1001 aa27.51■■□□□ 1.99
ATPAF1-213ENST00000574428 GRM1Q13255 1194 aa27.51■■□□□ 1.99
ATPAF1-213ENST00000574428 MB21D1Q8N884 522 aa27.51■■□□□ 1.99
ATPAF1-213ENST00000574428 ZNF396Q96N95 335 aaPredicted RBP27.51■■□□□ 1.99
ATPAF1-213ENST00000574428 PAGR1Q9BTK6 254 aa27.51■■□□□ 1.99
ATPAF1-213ENST00000574428 GLT8D2Q9H1C3 349 aa27.51■■□□□ 1.99
ATPAF1-213ENST00000574428 GDPD2Q9HCC8 539 aa27.51■■□□□ 1.99
ATPAF1-213ENST00000574428 PNMA2Q9UL42 364 aa27.51■■□□□ 1.99
ATPAF1-213ENST00000574428 TESPA1A2RU30 521 aaPredicted RBP27.5■■□□□ 1.99
ATPAF1-213ENST00000574428 MEIS2O14770 477 aa27.5■■□□□ 1.99
ATPAF1-213ENST00000574428 CLK2P49760 499 aaKnown RBP27.5■■□□□ 1.99
ATPAF1-213ENST00000574428 KRT85P78386 507 aa27.5■■□□□ 1.99
ATPAF1-213ENST00000574428 CEBPZQ03701 1054 aaKnown RBP27.5■■□□□ 1.99
ATPAF1-213ENST00000574428 MUM1L1Q5H9M0 696 aa27.5■■□□□ 1.99
ATPAF1-213ENST00000574428 CLEC4DQ8WXI8 215 aa27.5■■□□□ 1.99
ATPAF1-213ENST00000574428 PGBD1Q96JS3 809 aa27.5■■□□□ 1.99
ATPAF1-213ENST00000574428 USP28Q96RU2 1077 aa27.5■■□□□ 1.99
ATPAF1-213ENST00000574428 NFIBO00712 420 aa27.5■■□□□ 1.99
ATPAF1-213ENST00000574428 FIBPO43427 364 aa27.5■■□□□ 1.99
ATPAF1-213ENST00000574428 CFBP00751 764 aa27.5■■□□□ 1.99
ATPAF1-213ENST00000574428 HOXA13P31271 388 aaPredicted RBP27.5■■□□□ 1.99
ATPAF1-213ENST00000574428 TOB1P50616 345 aaPredicted RBP27.5■■□□□ 1.99
ATPAF1-213ENST00000574428 KRT25Q7Z3Z0 450 aa27.5■■□□□ 1.99
ATPAF1-213ENST00000574428 TBC1D5Q92609 795 aa27.5■■□□□ 1.99
ATPAF1-213ENST00000574428 TRERF1Q96PN7 1200 aa27.5■■□□□ 1.99
ATPAF1-213ENST00000574428 ATP2B1P20020 1258 aa27.49■■□□□ 1.99
ATPAF1-213ENST00000574428 STAT3P40763 770 aa27.49■■□□□ 1.99
ATPAF1-213ENST00000574428 APLP1P51693 650 aa27.49■■□□□ 1.99
ATPAF1-213ENST00000574428 CYP4F22Q6NT55 531 aa27.49■■□□□ 1.99
ATPAF1-213ENST00000574428 TXNRD2Q9NNW7 524 aa27.49■■□□□ 1.99
ATPAF1-213ENST00000574428 RNF146Q9NTX7 359 aa27.49■■□□□ 1.99
ATPAF1-213ENST00000574428 TCHHQ07283 1943 aa27.49■■□□□ 1.99
ATPAF1-213ENST00000574428 CNMDO75829 334 aa27.48■■□□□ 1.99
ATPAF1-213ENST00000574428 SMCR8Q8TEV9 937 aaPredicted RBP27.48■■□□□ 1.99
ATPAF1-213ENST00000574428 CREBZFQ9NS37 354 aa27.48■■□□□ 1.99
ATPAF1-213ENST00000574428 INF2Q27J81 1249 aa27.48■■□□□ 1.99
ATPAF1-213ENST00000574428 RILPL1Q5EBL4 403 aa27.48■■□□□ 1.99
ATPAF1-213ENST00000574428 RBPJLQ9UBG7 517 aa27.48■■□□□ 1.99
ATPAF1-213ENST00000574428 CLIC4Q9Y696 253 aa27.48■■□□□ 1.99
ATPAF1-213ENST00000574428 IGF2BP3O00425 579 aaKnown RBP eCLIP27.47■■□□□ 1.99
ATPAF1-213ENST00000574428 NONOQ15233 471 aaKnown RBP eCLIP27.47■■□□□ 1.99
ATPAF1-213ENST00000574428 CFAP45Q9UL16 551 aa27.47■■□□□ 1.99
ATPAF1-213ENST00000574428 NOL7Q9UMY1 257 aaKnown RBP27.47■■□□□ 1.99
ATPAF1-213ENST00000574428 GCOM1H8Y6P7 765 aaPredicted RBP27.46■■□□□ 1.99
ATPAF1-213ENST00000574428 PIK3CDO00329 1044 aa27.46■■□□□ 1.99
ATPAF1-213ENST00000574428 WNT7AO00755 349 aa27.46■■□□□ 1.99
ATPAF1-213ENST00000574428 POLR2MP0CAP2 368 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms