RNA–Protein interactions for RNA: ENST00000574379.2

NCBP3-203, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-203ENST00000574379 FAM212AQ96EL1 285 aa11.79□□□□□ -0.52
NCBP3-203ENST00000574379 KANSL2Q9H9L4 492 aa11.79□□□□□ -0.52
NCBP3-203ENST00000574379 ARHGEF10LQ9HCE6 1279 aa11.79□□□□□ -0.52
NCBP3-203ENST00000574379 INCENPQ9NQS7 918 aa11.79□□□□□ -0.52
NCBP3-203ENST00000574379 STARD7Q9NQZ5 370 aa11.79□□□□□ -0.52
NCBP3-203ENST00000574379 PHF24Q9UPV7 400 aa11.79□□□□□ -0.52
NCBP3-203ENST00000574379 TMX2Q9Y320 296 aa11.79□□□□□ -0.52
NCBP3-203ENST00000574379 MYH6P13533 1939 aa11.79□□□□□ -0.52
NCBP3-203ENST00000574379 CFAP54Q96N23 3096 aa11.78□□□□□ -0.52
NCBP3-203ENST00000574379 CHD7Q9P2D1 2997 aa11.78□□□□□ -0.52
NCBP3-203ENST00000574379 PGK1P00558 417 aa11.78□□□□□ -0.52
NCBP3-203ENST00000574379 FGBP02675 491 aa11.78□□□□□ -0.52
NCBP3-203ENST00000574379 RARBP10826 455 aa11.78□□□□□ -0.52
NCBP3-203ENST00000574379 EEF2P13639 858 aaKnown RBP11.78□□□□□ -0.52
NCBP3-203ENST00000574379 VCAM1P19320 739 aa11.78□□□□□ -0.52
NCBP3-203ENST00000574379 HAND2P61296 217 aa11.78□□□□□ -0.52
NCBP3-203ENST00000574379 KIAA1755Q5JYT7 1200 aa11.78□□□□□ -0.52
NCBP3-203ENST00000574379 TBC1D10CQ8IV04 446 aa11.78□□□□□ -0.52
NCBP3-203ENST00000574379 ARNTL2Q8WYA1 636 aa11.78□□□□□ -0.52
NCBP3-203ENST00000574379 VTI1AQ96AJ9 217 aa11.78□□□□□ -0.52
NCBP3-203ENST00000574379 MFSD14AQ96MC6 490 aa11.78□□□□□ -0.52
NCBP3-203ENST00000574379 DCXO43602 365 aa11.77□□□□□ -0.53
NCBP3-203ENST00000574379 TSPY3P0CV98 308 aa11.77□□□□□ -0.53
NCBP3-203ENST00000574379 TSPY8P0CW00 308 aa11.77□□□□□ -0.53
NCBP3-203ENST00000574379 PTPN5P54829 565 aa11.77□□□□□ -0.53
NCBP3-203ENST00000574379 TFAP4Q01664 338 aa11.77□□□□□ -0.53
NCBP3-203ENST00000574379 PTH1RQ03431 593 aa11.77□□□□□ -0.53
NCBP3-203ENST00000574379 RASIP1Q5U651 963 aa11.77□□□□□ -0.53
NCBP3-203ENST00000574379 HFE2Q6ZVN8 426 aa11.77□□□□□ -0.53
NCBP3-203ENST00000574379 STAG1Q8WVM7 1258 aa11.77□□□□□ -0.53
NCBP3-203ENST00000574379 CEP95Q96GE4 821 aa11.77□□□□□ -0.53
NCBP3-203ENST00000574379 SH2D4AQ9H788 454 aa11.77□□□□□ -0.53
NCBP3-203ENST00000574379 VCPKMTQ9H867 229 aa11.77□□□□□ -0.53
NCBP3-203ENST00000574379 NYAP2Q9P242 653 aa11.77□□□□□ -0.53
NCBP3-203ENST00000574379 SMCHD1A6NHR9 2005 aa11.77□□□□□ -0.53
NCBP3-203ENST00000574379 USP17L15C9J2P7 530 aa11.76□□□□□ -0.53
NCBP3-203ENST00000574379 USP17L13C9JLJ4 530 aa11.76□□□□□ -0.53
NCBP3-203ENST00000574379 USP17L11C9JVI0 530 aa11.76□□□□□ -0.53
NCBP3-203ENST00000574379 USP17L18D6R9N7 530 aa11.76□□□□□ -0.53
NCBP3-203ENST00000574379 USP17L22D6RA61 530 aa11.76□□□□□ -0.53
NCBP3-203ENST00000574379 USP17L17D6RBQ6 530 aa11.76□□□□□ -0.53
NCBP3-203ENST00000574379 USP17L19D6RCP7 530 aa11.76□□□□□ -0.53
NCBP3-203ENST00000574379 USP17L20D6RJB6 530 aa11.76□□□□□ -0.53
NCBP3-203ENST00000574379 ZNF213O14771 459 aa11.76□□□□□ -0.53
NCBP3-203ENST00000574379 KRT37O76014 449 aa11.76□□□□□ -0.53
NCBP3-203ENST00000574379 PCP11498 1178 aaKnown RBP11.76□□□□□ -0.53
NCBP3-203ENST00000574379 USP17L24Q0WX57 530 aa11.76□□□□□ -0.53
NCBP3-203ENST00000574379 GRB14Q14449 540 aa11.76□□□□□ -0.53
NCBP3-203ENST00000574379 CATSPERGQ6ZRH7 1159 aa11.76□□□□□ -0.53
NCBP3-203ENST00000574379 MS4A3Q96HJ5 214 aa11.76□□□□□ -0.53
NCBP3-203ENST00000574379 ESYT1Q9BSJ8 1104 aa11.76□□□□□ -0.53
NCBP3-203ENST00000574379 RPAP3Q9H6T3 665 aaPredicted RBP11.76□□□□□ -0.53
NCBP3-203ENST00000574379 FAM86C1Q9NVL1 165 aa11.76□□□□□ -0.53
NCBP3-203ENST00000574379 MTMR4Q9NYA4 1195 aa11.76□□□□□ -0.53
NCBP3-203ENST00000574379 CTNNA3Q9UI47 895 aa11.76□□□□□ -0.53
NCBP3-203ENST00000574379 SLC4A7Q9Y6M7 1214 aa11.76□□□□□ -0.53
NCBP3-203ENST00000574379 TSPY2A6NKD2 308 aa11.75□□□□□ -0.53
NCBP3-203ENST00000574379 WDR46O15213 610 aaKnown RBP11.75□□□□□ -0.53
NCBP3-203ENST00000574379 RANBP6O60518 1105 aaKnown RBP11.75□□□□□ -0.53
NCBP3-203ENST00000574379 HOXC6P09630 235 aa11.75□□□□□ -0.53
NCBP3-203ENST00000574379 MFSD6Q6ZSS7 791 aa11.75□□□□□ -0.53
NCBP3-203ENST00000574379 ANKRD33Q7Z3H0 272 aa11.75□□□□□ -0.53
NCBP3-203ENST00000574379 FAM178BQ8IXR5 827 aa11.75□□□□□ -0.53
NCBP3-203ENST00000574379 PRSS33Q8NF86 280 aa11.75□□□□□ -0.53
NCBP3-203ENST00000574379 NUP133Q8WUM0 1156 aa11.75□□□□□ -0.53
NCBP3-203ENST00000574379 MKL1Q969V6 931 aa11.75□□□□□ -0.53
NCBP3-203ENST00000574379 KIF12Q96FN5 646 aa11.75□□□□□ -0.53
NCBP3-203ENST00000574379 TOX2Q96NM4 488 aa11.75□□□□□ -0.53
NCBP3-203ENST00000574379 GOPCQ9HD26 462 aa11.75□□□□□ -0.53
NCBP3-203ENST00000574379 IL23AQ9NPF7 189 aa11.75□□□□□ -0.53
NCBP3-203ENST00000574379 IL17RBQ9NRM6 502 aa11.75□□□□□ -0.53
NCBP3-203ENST00000574379 CLIP2Q9UDT6 1046 aa11.75□□□□□ -0.53
NCBP3-203ENST00000574379 RABGAP1Q9Y3P9 1069 aa11.75□□□□□ -0.53
NCBP3-203ENST00000574379 PCDHA11Q9Y5I1 949 aa11.75□□□□□ -0.53
NCBP3-203ENST00000574379 NEDD4P46934 1319 aa11.75□□□□□ -0.53
NCBP3-203ENST00000574379 NMT2O60551 498 aa11.74□□□□□ -0.53
NCBP3-203ENST00000574379 CDC45O75419 566 aa11.74□□□□□ -0.53
NCBP3-203ENST00000574379 TTLL1O95922 423 aa11.74□□□□□ -0.53
NCBP3-203ENST00000574379 CA3P07451 260 aa11.74□□□□□ -0.53
NCBP3-203ENST00000574379 IL9P15248 144 aa11.74□□□□□ -0.53
NCBP3-203ENST00000574379 ADORA2AP29274 412 aa11.74□□□□□ -0.53
NCBP3-203ENST00000574379 CYP2C18P33260 490 aa11.74□□□□□ -0.53
NCBP3-203ENST00000574379 NOVP48745 357 aa11.74□□□□□ -0.53
NCBP3-203ENST00000574379 IMMTQ16891 758 aaKnown RBP11.74□□□□□ -0.53
NCBP3-203ENST00000574379 TMEM67Q5HYA8 995 aa11.74□□□□□ -0.53
NCBP3-203ENST00000574379 RRP12Q5JTH9 1297 aaKnown RBP11.74□□□□□ -0.53
NCBP3-203ENST00000574379 OLFML2BQ68BL8 750 aa11.74□□□□□ -0.53
NCBP3-203ENST00000574379 LBX2Q6XYB7 198 aa11.74□□□□□ -0.53
NCBP3-203ENST00000574379 SPICE1Q8N0Z3 855 aa11.74□□□□□ -0.53
NCBP3-203ENST00000574379 TANGO6Q9C0B7 1094 aa11.74□□□□□ -0.53
NCBP3-203ENST00000574379 LSG1Q9H089 658 aaKnown RBP11.74□□□□□ -0.53
NCBP3-203ENST00000574379 RNF41Q9H4P4 317 aaPredicted RBP11.74□□□□□ -0.53
NCBP3-203ENST00000574379 TOMM22Q9NS69 142 aa11.74□□□□□ -0.53
NCBP3-203ENST00000574379 TBX21Q9UL17 535 aa11.74□□□□□ -0.53
NCBP3-203ENST00000574379 SYNPO2Q9UMS6 1093 aa11.74□□□□□ -0.53
NCBP3-203ENST00000574379 ZNF236Q9UL36 1845 aa11.74□□□□□ -0.53
NCBP3-203ENST00000574379 PRRC2BQ5JSZ5 2229 aaKnown RBP11.74□□□□□ -0.53
NCBP3-203ENST00000574379 SPDYE16A6NNV3 312 aaPredicted RBP11.73□□□□□ -0.53
NCBP3-203ENST00000574379 ZNF536O15090 1300 aa11.73□□□□□ -0.53
NCBP3-203ENST00000574379 MAP3K13O43283 966 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms