RNA–Protein interactions for RNA: ENST00000572176.1

ATP2A3-211, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 428 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-211ENST00000572176 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.18■□□□□ 0.02
ATP2A3-211ENST00000572176 TRIM6-TRIM34B2RNG4 842 aa15.18■□□□□ 0.02
ATP2A3-211ENST00000572176 ASGR1P07306 291 aa15.18■□□□□ 0.02
ATP2A3-211ENST00000572176 PCP11498 1178 aaKnown RBP15.18■□□□□ 0.02
ATP2A3-211ENST00000572176 RAG1P15918 1043 aa15.18■□□□□ 0.02
ATP2A3-211ENST00000572176 EPHB4P54760 987 aa15.18■□□□□ 0.02
ATP2A3-211ENST00000572176 HAND2P61296 217 aa15.18■□□□□ 0.02
ATP2A3-211ENST00000572176 TTBK2Q6IQ55 1244 aa15.18■□□□□ 0.02
ATP2A3-211ENST00000572176 CHD1LQ86WJ1 897 aa15.18■□□□□ 0.02
ATP2A3-211ENST00000572176 TBC1D10CQ8IV04 446 aa15.18■□□□□ 0.02
ATP2A3-211ENST00000572176 RWDD1Q9H446 243 aaPredicted RBP15.18■□□□□ 0.02
ATP2A3-211ENST00000572176 TMEM39AQ9NV64 488 aa15.18■□□□□ 0.02
ATP2A3-211ENST00000572176 CYP39A1Q9NYL5 469 aa15.18■□□□□ 0.02
ATP2A3-211ENST00000572176 TBX21Q9UL17 535 aa15.18■□□□□ 0.02
ATP2A3-211ENST00000572176 GNEQ9Y223 722 aaKnown RBP15.18■□□□□ 0.02
ATP2A3-211ENST00000572176 DCDC2CA8MYV0 355 aa15.17■□□□□ 0.02
ATP2A3-211ENST00000572176 PDHBP11177 359 aa15.17■□□□□ 0.02
ATP2A3-211ENST00000572176 SLC16A2P36021 539 aa15.17■□□□□ 0.02
ATP2A3-211ENST00000572176 CDK7P50613 346 aa15.17■□□□□ 0.02
ATP2A3-211ENST00000572176 SMAD3P84022 425 aaKnown RBP15.17■□□□□ 0.02
ATP2A3-211ENST00000572176 AKNAD1Q5T1N1 836 aa15.17■□□□□ 0.02
ATP2A3-211ENST00000572176 ZNF697Q5TEC3 545 aa15.17■□□□□ 0.02
ATP2A3-211ENST00000572176 SYDE2Q5VT97 1194 aa15.17■□□□□ 0.02
ATP2A3-211ENST00000572176 B4GALNT3Q6L9W6 998 aa15.17■□□□□ 0.02
ATP2A3-211ENST00000572176 PLEKHM2Q8IWE5 1019 aa15.17■□□□□ 0.02
ATP2A3-211ENST00000572176 MORC4Q8TE76 937 aa15.17■□□□□ 0.02
ATP2A3-211ENST00000572176 RILPL2Q969X0 211 aa15.17■□□□□ 0.02
ATP2A3-211ENST00000572176 DDX49Q9Y6V7 483 aaKnown RBP15.17■□□□□ 0.02
ATP2A3-211ENST00000572176 NEDD4P46934 1319 aa15.17■□□□□ 0.02
ATP2A3-211ENST00000572176 A0A0U1RQG5 324 aaPredicted RBP15.16■□□□□ 0.02
ATP2A3-211ENST00000572176 IGHDP01880 384 aa15.16■□□□□ 0.02
ATP2A3-211ENST00000572176 SNHG28P0DPA3 235 aa15.16■□□□□ 0.02
ATP2A3-211ENST00000572176 SDSP20132 328 aa15.16■□□□□ 0.02
ATP2A3-211ENST00000572176 MFAP1P55081 439 aaKnown RBP15.16■□□□□ 0.02
ATP2A3-211ENST00000572176 NUCB1Q02818 461 aa15.16■□□□□ 0.02
ATP2A3-211ENST00000572176 TNFAIP2Q03169 654 aa15.16■□□□□ 0.02
ATP2A3-211ENST00000572176 FPGSQ05932 587 aa15.16■□□□□ 0.02
ATP2A3-211ENST00000572176 GNASQ5JWF2 1037 aa15.16■□□□□ 0.02
ATP2A3-211ENST00000572176 NSMFQ6X4W1 530 aa15.16■□□□□ 0.02
ATP2A3-211ENST00000572176 MFSD6Q6ZSS7 791 aa15.16■□□□□ 0.02
ATP2A3-211ENST00000572176 TLK2Q86UE8 772 aa15.16■□□□□ 0.02
ATP2A3-211ENST00000572176 RNPC3Q96LT9 517 aaKnown RBP15.16■□□□□ 0.02
ATP2A3-211ENST00000572176 YTHDC1Q96MU7 727 aaKnown RBP15.16■□□□□ 0.02
ATP2A3-211ENST00000572176 FRMPD2Q68DX3 1309 aaPredicted RBP15.16■□□□□ 0.02
ATP2A3-211ENST00000572176 A0A0C4DFX4 3053 aa15.15■□□□□ 0.02
ATP2A3-211ENST00000572176 ARVCFO00192 962 aa15.15■□□□□ 0.02
ATP2A3-211ENST00000572176 NFIBO00712 420 aa15.15■□□□□ 0.02
ATP2A3-211ENST00000572176 TIMP1P01033 207 aa15.15■□□□□ 0.02
ATP2A3-211ENST00000572176 SMPD1P17405 629 aa15.15■□□□□ 0.02
ATP2A3-211ENST00000572176 BEX3Q00994 111 aa15.15■□□□□ 0.02
ATP2A3-211ENST00000572176 ZNF543Q08ER8 600 aa15.15■□□□□ 0.02
ATP2A3-211ENST00000572176 TAPT1Q6NXT6 567 aa15.15■□□□□ 0.02
ATP2A3-211ENST00000572176 FBXO16Q8IX29 292 aaPredicted RBP15.15■□□□□ 0.02
ATP2A3-211ENST00000572176 FAM126BQ8IXS8 530 aa15.15■□□□□ 0.02
ATP2A3-211ENST00000572176 FAM161BQ96MY7 647 aa15.15■□□□□ 0.02
ATP2A3-211ENST00000572176 TTC14Q96N46 770 aa15.15■□□□□ 0.02
ATP2A3-211ENST00000572176 PURBQ96QR8 312 aaKnown RBP15.15■□□□□ 0.02
ATP2A3-211ENST00000572176 RNF41Q9H4P4 317 aaPredicted RBP15.15■□□□□ 0.02
ATP2A3-211ENST00000572176 VTA1Q9NP79 307 aa15.15■□□□□ 0.02
ATP2A3-211ENST00000572176 CUL9Q8IWT3 2517 aa15.14■□□□□ 0.01
ATP2A3-211ENST00000572176 UNC80Q8N2C7 3258 aa15.14■□□□□ 0.01
ATP2A3-211ENST00000572176 LOC102724159A0A0B4J2E5 919 aa15.14■□□□□ 0.01
ATP2A3-211ENST00000572176 NT5C2P49902 561 aa15.14■□□□□ 0.01
ATP2A3-211ENST00000572176 BAATQ14032 418 aaPredicted RBP15.14■□□□□ 0.01
ATP2A3-211ENST00000572176 PWP2Q15269 919 aaKnown RBP15.14■□□□□ 0.01
ATP2A3-211ENST00000572176 FSCN1Q16658 493 aaKnown RBP15.14■□□□□ 0.01
ATP2A3-211ENST00000572176 SLC43A3Q8NBI5 491 aa15.14■□□□□ 0.01
ATP2A3-211ENST00000572176 EXOC6Q8TAG9 804 aa15.14■□□□□ 0.01
ATP2A3-211ENST00000572176 GPCPD1Q9NPB8 672 aa15.14■□□□□ 0.01
ATP2A3-211ENST00000572176 PDGFCQ9NRA1 345 aa15.14■□□□□ 0.01
ATP2A3-211ENST00000572176 WDR19Q8NEZ3 1342 aa15.14■□□□□ 0.01
ATP2A3-211ENST00000572176 CABYRO75952 493 aa15.13■□□□□ 0.01
ATP2A3-211ENST00000572176 PTGS1P23219 599 aa15.13■□□□□ 0.01
ATP2A3-211ENST00000572176 ALDH5A1P51649 535 aaPredicted RBP15.13■□□□□ 0.01
ATP2A3-211ENST00000572176 IQSEC1Q6DN90 963 aa15.13■□□□□ 0.01
ATP2A3-211ENST00000572176 MFSD5Q6N075 450 aa15.13■□□□□ 0.01
ATP2A3-211ENST00000572176 CXCL17Q6UXB2 119 aa15.13■□□□□ 0.01
ATP2A3-211ENST00000572176 NOL8Q76FK4 1167 aaKnown RBP15.13■□□□□ 0.01
ATP2A3-211ENST00000572176 EEPD1Q7L9B9 569 aa15.13■□□□□ 0.01
ATP2A3-211ENST00000572176 CLEC4DQ8WXI8 215 aa15.13■□□□□ 0.01
ATP2A3-211ENST00000572176 ESR2Q92731 530 aa15.13■□□□□ 0.01
ATP2A3-211ENST00000572176 VTI1AQ96AJ9 217 aa15.13■□□□□ 0.01
ATP2A3-211ENST00000572176 TTYH1Q9H313 450 aaPredicted RBP15.13■□□□□ 0.01
ATP2A3-211ENST00000572176 ADD3Q9UEY8 706 aaKnown RBP15.13■□□□□ 0.01
ATP2A3-211ENST00000572176 PNMA2Q9UL42 364 aa15.13■□□□□ 0.01
ATP2A3-211ENST00000572176 Q9Y3F1 56 aa15.13■□□□□ 0.01
ATP2A3-211ENST00000572176 TMEM265A0A087WTH1 108 aa15.12■□□□□ 0.01
ATP2A3-211ENST00000572176 CD4P01730 458 aa15.12■□□□□ 0.01
ATP2A3-211ENST00000572176 TMEM63BQ5T3F8 832 aa15.12■□□□□ 0.01
ATP2A3-211ENST00000572176 CWC27Q6UX04 472 aaKnown RBP15.12■□□□□ 0.01
ATP2A3-211ENST00000572176 SLC30A10Q6XR72 485 aa15.12■□□□□ 0.01
ATP2A3-211ENST00000572176 AP5M1Q9H0R1 490 aa15.12■□□□□ 0.01
ATP2A3-211ENST00000572176 SEMA6BQ9H3T3 888 aa15.12■□□□□ 0.01
ATP2A3-211ENST00000572176 DIAPH3Q9NSV4 1193 aa15.12■□□□□ 0.01
ATP2A3-211ENST00000572176 EYSQ5T1H1 3165 aa15.12■□□□□ 0.01
ATP2A3-211ENST00000572176 PTPDC1A2A3K4 754 aa15.11■□□□□ 0.01
ATP2A3-211ENST00000572176 HIP1O00291 1037 aa15.11■□□□□ 0.01
ATP2A3-211ENST00000572176 ZNF213O14771 459 aa15.11■□□□□ 0.01
ATP2A3-211ENST00000572176 TLR3O15455 904 aaKnown RBP15.11■□□□□ 0.01
ATP2A3-211ENST00000572176 DYNC1LI2O43237 492 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms