RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 MYLIPQ8WY64 445 aa20.77■□□□□ 0.92
CIITA-206ENST00000571190 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.77■□□□□ 0.92
CIITA-206ENST00000571190 PDGFCQ9NRA1 345 aa20.77■□□□□ 0.92
CIITA-206ENST00000571190 MTMR7Q9Y216 660 aa20.77■□□□□ 0.92
CIITA-206ENST00000571190 A0A0C4DFX4 3053 aa20.76■□□□□ 0.91
CIITA-206ENST00000571190 LAMA2P24043 3122 aaKnown RBP20.76■□□□□ 0.91
CIITA-206ENST00000571190 SMPD1P17405 629 aa20.76■□□□□ 0.91
CIITA-206ENST00000571190 SLC16A2P36021 539 aa20.76■□□□□ 0.91
CIITA-206ENST00000571190 MFSD5Q6N075 450 aa20.76■□□□□ 0.91
CIITA-206ENST00000571190 TAPT1Q6NXT6 567 aa20.76■□□□□ 0.91
CIITA-206ENST00000571190 BTNL9Q6UXG8 535 aa20.76■□□□□ 0.91
CIITA-206ENST00000571190 ZNF589Q86UQ0 364 aaPredicted RBP20.76■□□□□ 0.91
CIITA-206ENST00000571190 SLC43A3Q8NBI5 491 aa20.76■□□□□ 0.91
CIITA-206ENST00000571190 VTI1AQ96AJ9 217 aa20.76■□□□□ 0.91
CIITA-206ENST00000571190 RANBP17Q9H2T7 1088 aaKnown RBP20.76■□□□□ 0.91
CIITA-206ENST00000571190 MROH7Q68CQ1 1323 aa20.76■□□□□ 0.91
CIITA-206ENST00000571190 CD4P01730 458 aa20.75■□□□□ 0.91
CIITA-206ENST00000571190 ICAM1P05362 532 aa20.75■□□□□ 0.91
CIITA-206ENST00000571190 CXCL17Q6UXB2 119 aa20.75■□□□□ 0.91
CIITA-206ENST00000571190 MORC4Q8TE76 937 aa20.75■□□□□ 0.91
CIITA-206ENST00000571190 DCAF4Q8WV16 495 aa20.75■□□□□ 0.91
CIITA-206ENST00000571190 TMEM47Q9BQJ4 181 aa20.75■□□□□ 0.91
CIITA-206ENST00000571190 COL25A1Q9BXS0 654 aaPredicted RBP20.75■□□□□ 0.91
CIITA-206ENST00000571190 CCPG1Q9ULG6 757 aa20.75■□□□□ 0.91
CIITA-206ENST00000571190 PLXNA1Q9UIW2 1896 aa20.75■□□□□ 0.91
CIITA-206ENST00000571190 HSPD1P10809 573 aaKnown RBP20.74■□□□□ 0.91
CIITA-206ENST00000571190 CCDC96Q2M329 555 aa20.74■□□□□ 0.91
CIITA-206ENST00000571190 MCMDC2Q4G0Z9 681 aa20.74■□□□□ 0.91
CIITA-206ENST00000571190 TMEM240Q5SV17 173 aa20.74■□□□□ 0.91
CIITA-206ENST00000571190 RASIP1Q5U651 963 aa20.74■□□□□ 0.91
CIITA-206ENST00000571190 TLK2Q86UE8 772 aa20.74■□□□□ 0.91
CIITA-206ENST00000571190 MAFAQ8NHW3 353 aaPredicted RBP20.74■□□□□ 0.91
CIITA-206ENST00000571190 TCP11L1Q9NUJ3 509 aa20.74■□□□□ 0.91
CIITA-206ENST00000571190 GRIN2DO15399 1336 aa20.74■□□□□ 0.91
CIITA-206ENST00000571190 TMEM265A0A087WTH1 108 aa20.73■□□□□ 0.91
CIITA-206ENST00000571190 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.73■□□□□ 0.91
CIITA-206ENST00000571190 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.73■□□□□ 0.91
CIITA-206ENST00000571190 DYNC1LI2O43237 492 aaPredicted RBP20.73■□□□□ 0.91
CIITA-206ENST00000571190 CSF2RAP15509 400 aa20.73■□□□□ 0.91
CIITA-206ENST00000571190 NMIQ13287 307 aaPredicted RBP20.73■□□□□ 0.91
CIITA-206ENST00000571190 RRP12Q5JTH9 1297 aaKnown RBP20.73■□□□□ 0.91
CIITA-206ENST00000571190 NSMFQ6X4W1 530 aa20.73■□□□□ 0.91
CIITA-206ENST00000571190 NOL8Q76FK4 1167 aaKnown RBP20.73■□□□□ 0.91
CIITA-206ENST00000571190 EEPD1Q7L9B9 569 aa20.73■□□□□ 0.91
CIITA-206ENST00000571190 FBXO16Q8IX29 292 aaPredicted RBP20.73■□□□□ 0.91
CIITA-206ENST00000571190 ZBTB47Q9UFB7 747 aaPredicted RBP20.73■□□□□ 0.91
CIITA-206ENST00000571190 NFIBO00712 420 aa20.72■□□□□ 0.91
CIITA-206ENST00000571190 TOP1P11387 765 aaKnown RBP20.72■□□□□ 0.91
CIITA-206ENST00000571190 DNAJB2P25686 324 aa20.72■□□□□ 0.91
CIITA-206ENST00000571190 PPIGQ13427 754 aaKnown RBP eCLIP20.72■□□□□ 0.91
CIITA-206ENST00000571190 BAATQ14032 418 aaPredicted RBP20.72■□□□□ 0.91
CIITA-206ENST00000571190 FSCN1Q16658 493 aaKnown RBP20.72■□□□□ 0.91
CIITA-206ENST00000571190 SYDE2Q5VT97 1194 aa20.72■□□□□ 0.91
CIITA-206ENST00000571190 IQSEC1Q6DN90 963 aa20.72■□□□□ 0.91
CIITA-206ENST00000571190 PPP1R12CQ9BZL4 782 aa20.72■□□□□ 0.91
CIITA-206ENST00000571190 TOMM22Q9NS69 142 aa20.72■□□□□ 0.91
CIITA-206ENST00000571190 FRMPD2Q68DX3 1309 aaPredicted RBP20.72■□□□□ 0.91
CIITA-206ENST00000571190 ACRP10323 421 aa20.71■□□□□ 0.91
CIITA-206ENST00000571190 CYP2C18P33260 490 aa20.71■□□□□ 0.91
CIITA-206ENST00000571190 HAND2P61296 217 aa20.71■□□□□ 0.91
CIITA-206ENST00000571190 GRIN2CQ14957 1233 aa20.71■□□□□ 0.91
CIITA-206ENST00000571190 TICAM2Q86XR7 235 aa20.71■□□□□ 0.91
CIITA-206ENST00000571190 CLEC4DQ8WXI8 215 aa20.71■□□□□ 0.91
CIITA-206ENST00000571190 LNPKQ9C0E8 428 aa20.71■□□□□ 0.91
CIITA-206ENST00000571190 GPCPD1Q9NPB8 672 aa20.71■□□□□ 0.91
CIITA-206ENST00000571190 Q9Y3F1 56 aa20.71■□□□□ 0.91
CIITA-206ENST00000571190 ZMYM6O95789 1325 aa20.71■□□□□ 0.91
CIITA-206ENST00000571190 CABYRO75952 493 aa20.7■□□□□ 0.9
CIITA-206ENST00000571190 PDHBP11177 359 aa20.7■□□□□ 0.9
CIITA-206ENST00000571190 ITGA7Q13683 1181 aa20.7■□□□□ 0.9
CIITA-206ENST00000571190 ZNF365Q70YC5 407 aa20.7■□□□□ 0.9
CIITA-206ENST00000571190 TBC1D10CQ8IV04 446 aa20.7■□□□□ 0.9
CIITA-206ENST00000571190 TMEM199Q8N511 208 aa20.7■□□□□ 0.9
CIITA-206ENST00000571190 AP5M1Q9H0R1 490 aa20.7■□□□□ 0.9
CIITA-206ENST00000571190 VTA1Q9NP79 307 aa20.7■□□□□ 0.9
CIITA-206ENST00000571190 UMODL1Q5DID0 1318 aa20.7■□□□□ 0.9
CIITA-206ENST00000571190 MYH4Q9Y623 1939 aa20.7■□□□□ 0.9
CIITA-206ENST00000571190 GRXCR1A8MXD5 290 aa20.69■□□□□ 0.9
CIITA-206ENST00000571190 TLR3O15455 904 aaKnown RBP20.69■□□□□ 0.9
CIITA-206ENST00000571190 SNHG28P0DPA3 235 aa20.69■□□□□ 0.9
CIITA-206ENST00000571190 FOSL2P15408 326 aa20.69■□□□□ 0.9
CIITA-206ENST00000571190 PBX2P40425 430 aa20.69■□□□□ 0.9
CIITA-206ENST00000571190 ALDH5A1P51649 535 aaPredicted RBP20.69■□□□□ 0.9
CIITA-206ENST00000571190 PSMC6P62333 389 aa20.69■□□□□ 0.9
CIITA-206ENST00000571190 KIAA1211Q6ZU35 1233 aa20.69■□□□□ 0.9
CIITA-206ENST00000571190 CCDC171Q6TFL3 1326 aa20.69■□□□□ 0.9
CIITA-206ENST00000571190 ZNF543Q08ER8 600 aa20.68■□□□□ 0.9
CIITA-206ENST00000571190 AKNAD1Q5T1N1 836 aa20.68■□□□□ 0.9
CIITA-206ENST00000571190 SLC30A10Q6XR72 485 aa20.68■□□□□ 0.9
CIITA-206ENST00000571190 SMC5Q8IY18 1101 aa20.68■□□□□ 0.9
CIITA-206ENST00000571190 TRPV6Q9H1D0 765 aa20.68■□□□□ 0.9
CIITA-206ENST00000571190 ZNF576Q9H609 170 aa20.68■□□□□ 0.9
CIITA-206ENST00000571190 B4GALT4O60513 344 aa20.67■□□□□ 0.9
CIITA-206ENST00000571190 DUSP28Q4G0W2 176 aa20.67■□□□□ 0.9
CIITA-206ENST00000571190 TIFAQ96CG3 184 aa20.67■□□□□ 0.9
CIITA-206ENST00000571190 VWCEQ96DN2 955 aa20.67■□□□□ 0.9
CIITA-206ENST00000571190 TTC14Q96N46 770 aa20.67■□□□□ 0.9
CIITA-206ENST00000571190 PBX4Q9BYU1 374 aa20.67■□□□□ 0.9
CIITA-206ENST00000571190 HIPK3Q9H422 1215 aa20.67■□□□□ 0.9
CIITA-206ENST00000571190 IL23AQ9NPF7 189 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms