RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 LCTP09848 1927 aa17.48■□□□□ 0.39
NDE1-203ENST00000570727 ASB14A6NK59 587 aa17.47■□□□□ 0.39
NDE1-203ENST00000570727 ARVCFO00192 962 aa17.47■□□□□ 0.39
NDE1-203ENST00000570727 HSPD1P10809 573 aaKnown RBP17.47■□□□□ 0.39
NDE1-203ENST00000570727 TNFAIP2Q03169 654 aa17.47■□□□□ 0.39
NDE1-203ENST00000570727 FPGSQ05932 587 aa17.47■□□□□ 0.39
NDE1-203ENST00000570727 BTNL9Q6UXG8 535 aa17.47■□□□□ 0.39
NDE1-203ENST00000570727 ZNF589Q86UQ0 364 aaPredicted RBP17.47■□□□□ 0.39
NDE1-203ENST00000570727 TICAM2Q86XR7 235 aa17.47■□□□□ 0.39
NDE1-203ENST00000570727 DCAF4Q8WV16 495 aa17.47■□□□□ 0.39
NDE1-203ENST00000570727 VTI1AQ96AJ9 217 aa17.47■□□□□ 0.39
NDE1-203ENST00000570727 PTGS1P23219 599 aa17.46■□□□□ 0.39
NDE1-203ENST00000570727 SLC16A2P36021 539 aa17.46■□□□□ 0.39
NDE1-203ENST00000570727 BEX3Q00994 111 aa17.46■□□□□ 0.39
NDE1-203ENST00000570727 TAPT1Q6NXT6 567 aa17.46■□□□□ 0.39
NDE1-203ENST00000570727 RNPC3Q96LT9 517 aaKnown RBP17.46■□□□□ 0.39
NDE1-203ENST00000570727 PURBQ96QR8 312 aaKnown RBP17.46■□□□□ 0.39
NDE1-203ENST00000570727 TMEM47Q9BQJ4 181 aa17.46■□□□□ 0.39
NDE1-203ENST00000570727 RANBP17Q9H2T7 1088 aaKnown RBP17.46■□□□□ 0.39
NDE1-203ENST00000570727 PDGFCQ9NRA1 345 aa17.46■□□□□ 0.39
NDE1-203ENST00000570727 TCP11L1Q9NUJ3 509 aa17.46■□□□□ 0.39
NDE1-203ENST00000570727 ICAM1P05362 532 aa17.45■□□□□ 0.38
NDE1-203ENST00000570727 TOP1P11387 765 aaKnown RBP17.45■□□□□ 0.38
NDE1-203ENST00000570727 NMIQ13287 307 aaPredicted RBP17.45■□□□□ 0.38
NDE1-203ENST00000570727 RRP12Q5JTH9 1297 aaKnown RBP17.45■□□□□ 0.38
NDE1-203ENST00000570727 TMEM63BQ5T3F8 832 aa17.45■□□□□ 0.38
NDE1-203ENST00000570727 MFSD5Q6N075 450 aa17.45■□□□□ 0.38
NDE1-203ENST00000570727 C16orf59Q7L2K0 433 aa17.45■□□□□ 0.38
NDE1-203ENST00000570727 FAM126BQ8IXS8 530 aa17.45■□□□□ 0.38
NDE1-203ENST00000570727 LNPKQ9C0E8 428 aa17.45■□□□□ 0.38
NDE1-203ENST00000570727 CCPG1Q9ULG6 757 aa17.45■□□□□ 0.38
NDE1-203ENST00000570727 MROH7Q68CQ1 1323 aa17.45■□□□□ 0.38
NDE1-203ENST00000570727 LRRC37A2A6NM11 1700 aa17.44■□□□□ 0.38
NDE1-203ENST00000570727 A0A0U1RQG5 324 aaPredicted RBP17.44■□□□□ 0.38
NDE1-203ENST00000570727 CD4P01730 458 aa17.44■□□□□ 0.38
NDE1-203ENST00000570727 SMPD1P17405 629 aa17.44■□□□□ 0.38
NDE1-203ENST00000570727 HAND2P61296 217 aa17.44■□□□□ 0.38
NDE1-203ENST00000570727 CCDC96Q2M329 555 aa17.44■□□□□ 0.38
NDE1-203ENST00000570727 IQSEC1Q6DN90 963 aa17.44■□□□□ 0.38
NDE1-203ENST00000570727 NSMFQ6X4W1 530 aa17.44■□□□□ 0.38
NDE1-203ENST00000570727 NOL8Q76FK4 1167 aaKnown RBP17.44■□□□□ 0.38
NDE1-203ENST00000570727 EEPD1Q7L9B9 569 aa17.44■□□□□ 0.38
NDE1-203ENST00000570727 SLC43A3Q8NBI5 491 aa17.44■□□□□ 0.38
NDE1-203ENST00000570727 MORC4Q8TE76 937 aa17.44■□□□□ 0.38
NDE1-203ENST00000570727 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.44■□□□□ 0.386e-7■■□□□ 13.4
NDE1-203ENST00000570727 TOMM22Q9NS69 142 aa17.44■□□□□ 0.38
NDE1-203ENST00000570727 VCANP13611 3396 aa17.44■□□□□ 0.38
NDE1-203ENST00000570727 CHD9Q3L8U1 2897 aa17.43■□□□□ 0.38
NDE1-203ENST00000570727 DYNC1LI2O43237 492 aaPredicted RBP17.43■□□□□ 0.38
NDE1-203ENST00000570727 BAATQ14032 418 aaPredicted RBP17.43■□□□□ 0.38
NDE1-203ENST00000570727 SYDE2Q5VT97 1194 aa17.43■□□□□ 0.38
NDE1-203ENST00000570727 CXCL17Q6UXB2 119 aa17.43■□□□□ 0.38
NDE1-203ENST00000570727 TLK2Q86UE8 772 aa17.43■□□□□ 0.38
NDE1-203ENST00000570727 SMC5Q8IY18 1101 aa17.43■□□□□ 0.38
NDE1-203ENST00000570727 GPCPD1Q9NPB8 672 aa17.43■□□□□ 0.38
NDE1-203ENST00000570727 GRIN2DO15399 1336 aa17.43■□□□□ 0.38
NDE1-203ENST00000570727 ZMYM6O95789 1325 aa17.43■□□□□ 0.38
NDE1-203ENST00000570727 FRMPD2Q68DX3 1309 aaPredicted RBP17.43■□□□□ 0.38
NDE1-203ENST00000570727 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.42■□□□□ 0.38
NDE1-203ENST00000570727 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.42■□□□□ 0.38
NDE1-203ENST00000570727 TRIM6-TRIM34B2RNG4 842 aa17.42■□□□□ 0.38
NDE1-203ENST00000570727 PDHBP11177 359 aa17.42■□□□□ 0.38
NDE1-203ENST00000570727 FSCN1Q16658 493 aaKnown RBP17.42■□□□□ 0.38
NDE1-203ENST00000570727 TMEM240Q5SV17 173 aa17.42■□□□□ 0.38
NDE1-203ENST00000570727 AKNAD1Q5T1N1 836 aa17.42■□□□□ 0.38
NDE1-203ENST00000570727 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.42■□□□□ 0.38
NDE1-203ENST00000570727 FBXO16Q8IX29 292 aaPredicted RBP17.42■□□□□ 0.38
NDE1-203ENST00000570727 MYLIPQ8WY64 445 aa17.42■□□□□ 0.38
NDE1-203ENST00000570727 RILPL2Q969X0 211 aa17.42■□□□□ 0.38
NDE1-203ENST00000570727 TTC14Q96N46 770 aa17.42■□□□□ 0.38
NDE1-203ENST00000570727 AP5M1Q9H0R1 490 aa17.42■□□□□ 0.38
NDE1-203ENST00000570727 Q9Y3F1 56 aa17.42■□□□□ 0.38
NDE1-203ENST00000570727 CCDC171Q6TFL3 1326 aa17.42■□□□□ 0.38
NDE1-203ENST00000570727 NFIBO00712 420 aa17.41■□□□□ 0.38
NDE1-203ENST00000570727 IGHDP01880 384 aa17.41■□□□□ 0.38
NDE1-203ENST00000570727 CSF2RAP15509 400 aa17.41■□□□□ 0.38
NDE1-203ENST00000570727 SDSP20132 328 aa17.41■□□□□ 0.38
NDE1-203ENST00000570727 B4GALNT3Q6L9W6 998 aa17.41■□□□□ 0.38
NDE1-203ENST00000570727 TBC1D10CQ8IV04 446 aa17.41■□□□□ 0.38
NDE1-203ENST00000570727 PLEKHM2Q8IWE5 1019 aa17.41■□□□□ 0.38
NDE1-203ENST00000570727 CLEC4DQ8WXI8 215 aa17.41■□□□□ 0.38
NDE1-203ENST00000570727 VTA1Q9NP79 307 aa17.41■□□□□ 0.38
NDE1-203ENST00000570727 TMEM265A0A087WTH1 108 aa17.4■□□□□ 0.38
NDE1-203ENST00000570727 TLR3O15455 904 aaKnown RBP17.4■□□□□ 0.38
NDE1-203ENST00000570727 CABYRO75952 493 aa17.4■□□□□ 0.38
NDE1-203ENST00000570727 SNHG28P0DPA3 235 aa17.4■□□□□ 0.38
NDE1-203ENST00000570727 CYP2C18P33260 490 aa17.4■□□□□ 0.38
NDE1-203ENST00000570727 ALDH5A1P51649 535 aaPredicted RBP17.4■□□□□ 0.38
NDE1-203ENST00000570727 ZNF543Q08ER8 600 aa17.4■□□□□ 0.38
NDE1-203ENST00000570727 PPIGQ13427 754 aaKnown RBP eCLIP17.4■□□□□ 0.38
NDE1-203ENST00000570727 ITGA7Q13683 1181 aa17.4■□□□□ 0.38
NDE1-203ENST00000570727 AAMPQ13685 434 aa17.4■□□□□ 0.38
NDE1-203ENST00000570727 RASIP1Q5U651 963 aa17.4■□□□□ 0.38
NDE1-203ENST00000570727 MFSD6Q6ZSS7 791 aa17.4■□□□□ 0.38
NDE1-203ENST00000570727 KIAA1211Q6ZU35 1233 aa17.4■□□□□ 0.38
NDE1-203ENST00000570727 PPP1R12CQ9BZL4 782 aa17.4■□□□□ 0.38
NDE1-203ENST00000570727 RWDD1Q9H446 243 aaPredicted RBP17.4■□□□□ 0.38
NDE1-203ENST00000570727 OSBPL3Q9H4L5 887 aa17.4■□□□□ 0.38
NDE1-203ENST00000570727 RBM47A0AV96 593 aaKnown RBP17.39■□□□□ 0.37
NDE1-203ENST00000570727 ACRP10323 421 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms