RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-222ENST00000569820 USP17L4A6NCW7 530 aa13.46□□□□□ -0.25
SPG7-222ENST00000569820 G3V3G9 751 aa13.46□□□□□ -0.25
SPG7-222ENST00000569820 PRPF3O43395 683 aaKnown RBP13.46□□□□□ -0.25
SPG7-222ENST00000569820 TSPY3P0CV98 308 aa13.46□□□□□ -0.25
SPG7-222ENST00000569820 TSPY8P0CW00 308 aa13.46□□□□□ -0.25
SPG7-222ENST00000569820 SSR1P43307 286 aaKnown RBP13.46□□□□□ -0.25
SPG7-222ENST00000569820 CDK8P49336 464 aa13.46□□□□□ -0.25
SPG7-222ENST00000569820 DCAF8Q5TAQ9 597 aa13.46□□□□□ -0.25
SPG7-222ENST00000569820 USP17L1Q7RTZ2 530 aa13.46□□□□□ -0.25
SPG7-222ENST00000569820 DIS3L2Q8IYB7 885 aaKnown RBP13.46□□□□□ -0.25
SPG7-222ENST00000569820 FAM204AQ9H8W3 233 aa13.46□□□□□ -0.25
SPG7-222ENST00000569820 LZTFL1Q9NQ48 299 aa13.46□□□□□ -0.25
SPG7-222ENST00000569820 SIPA1L1O43166 1804 aa13.46□□□□□ -0.25
SPG7-222ENST00000569820 KIF5CO60282 957 aa13.46□□□□□ -0.26
SPG7-222ENST00000569820 ECE2O60344 883 aa13.46□□□□□ -0.26
SPG7-222ENST00000569820 SCNN1DP51172 638 aa13.46□□□□□ -0.26
SPG7-222ENST00000569820 PNOCQ13519 176 aa13.46□□□□□ -0.26
SPG7-222ENST00000569820 C11orf91Q3C1V1 193 aa13.46□□□□□ -0.26
SPG7-222ENST00000569820 TADA2BQ86TJ2 420 aa13.46□□□□□ -0.26
SPG7-222ENST00000569820 NOSTRINQ8IVI9 506 aa13.46□□□□□ -0.26
SPG7-222ENST00000569820 CTCFLQ8NI51 663 aaPredicted RBP13.46□□□□□ -0.26
SPG7-222ENST00000569820 TACO1Q9BSH4 297 aaKnown RBP13.46□□□□□ -0.26
SPG7-222ENST00000569820 BTBD18B2RXH4 712 aa13.45□□□□□ -0.26
SPG7-222ENST00000569820 RHOXF2BP0C7M4 288 aa13.45□□□□□ -0.26
SPG7-222ENST00000569820 VSNL1P62760 191 aa13.45□□□□□ -0.26
SPG7-222ENST00000569820 SF3B2Q13435 895 aaKnown RBP13.45□□□□□ -0.26
SPG7-222ENST00000569820 TUBB2AQ13885 445 aa13.45□□□□□ -0.26
SPG7-222ENST00000569820 HSP90AA4PQ58FG1 418 aa13.45□□□□□ -0.26
SPG7-222ENST00000569820 HHIPL2Q6UWX4 724 aa13.45□□□□□ -0.26
SPG7-222ENST00000569820 ZNF444Q8N0Y2 327 aaPredicted RBP13.45□□□□□ -0.26
SPG7-222ENST00000569820 SRBD1Q8N5C6 995 aaKnown RBP13.45□□□□□ -0.26
SPG7-222ENST00000569820 JMYQ8N9B5 988 aa13.45□□□□□ -0.26
SPG7-222ENST00000569820 PNMA1Q8ND90 353 aa13.45□□□□□ -0.26
SPG7-222ENST00000569820 MAP3K14Q99558 947 aa13.45□□□□□ -0.26
SPG7-222ENST00000569820 RHOXF2Q9BQY4 288 aa13.45□□□□□ -0.26
SPG7-222ENST00000569820 TUBB2BQ9BVA1 445 aa13.45□□□□□ -0.26
SPG7-222ENST00000569820 KAT14Q9H8E8 782 aa13.45□□□□□ -0.26
SPG7-222ENST00000569820 ZNF287Q9HBT7 754 aa13.45□□□□□ -0.26
SPG7-222ENST00000569820 DDX4Q9NQI0 724 aaKnown RBP13.45□□□□□ -0.26
SPG7-222ENST00000569820 BAZ2BQ9UIF8 2168 aaKnown RBP13.45□□□□□ -0.26
SPG7-222ENST00000569820 hCG_1642624A0A1W2PR95 340 aa13.45□□□□□ -0.26
SPG7-222ENST00000569820 MARCKSP29966 332 aaPredicted RBP13.45□□□□□ -0.26
SPG7-222ENST00000569820 SLC39A14Q15043 492 aa13.45□□□□□ -0.26
SPG7-222ENST00000569820 PTPAQ15257 358 aa13.45□□□□□ -0.26
SPG7-222ENST00000569820 CCDC178Q5BJE1 867 aa13.45□□□□□ -0.26
SPG7-222ENST00000569820 DACT2Q5SW24 774 aa13.45□□□□□ -0.26
SPG7-222ENST00000569820 STRIP1Q5VSL9 837 aa13.45□□□□□ -0.26
SPG7-222ENST00000569820 FOXP1Q9H334 677 aaPredicted RBP13.45□□□□□ -0.26
SPG7-222ENST00000569820 PLEKHA4Q9H4M7 779 aa13.45□□□□□ -0.26
SPG7-222ENST00000569820 V9GY48 417 aaPredicted RBP13.45□□□□□ -0.26
SPG7-222ENST00000569820 GREB1LQ9C091 1923 aaPredicted RBP13.44□□□□□ -0.26
SPG7-222ENST00000569820 GOLGB1Q14789 3259 aaKnown RBP13.44□□□□□ -0.26
SPG7-222ENST00000569820 A0A087WUV0 522 aaPredicted RBP13.44□□□□□ -0.26
SPG7-222ENST00000569820 TUBBP07437 444 aa13.44□□□□□ -0.26
SPG7-222ENST00000569820 FKBP1AP62942 108 aaKnown RBP13.44□□□□□ -0.26
SPG7-222ENST00000569820 AKAP17AQ02040 695 aaKnown RBP13.44□□□□□ -0.26
SPG7-222ENST00000569820 PICALMQ13492 652 aa13.44□□□□□ -0.26
SPG7-222ENST00000569820 MTF1Q14872 753 aa13.44□□□□□ -0.26
SPG7-222ENST00000569820 SAFBQ15424 915 aaKnown RBP eCLIP13.44□□□□□ -0.26
SPG7-222ENST00000569820 ZKSCAN8Q15776 578 aaPredicted RBP13.44□□□□□ -0.26
SPG7-222ENST00000569820 AOC3Q16853 763 aa13.44□□□□□ -0.26
SPG7-222ENST00000569820 KIF4BQ2VIQ3 1234 aa13.44□□□□□ -0.26
SPG7-222ENST00000569820 APOBEC3HQ6NTF7 200 aaKnown RBP13.44□□□□□ -0.26
SPG7-222ENST00000569820 TEKT1Q969V4 418 aa13.44□□□□□ -0.26
SPG7-222ENST00000569820 FAM107BQ9H098 131 aa13.44□□□□□ -0.26
SPG7-222ENST00000569820 VPS54Q9P1Q0 977 aa13.44□□□□□ -0.26
SPG7-222ENST00000569820 GABPAQ06546 454 aa13.44□□□□□ -0.26
SPG7-222ENST00000569820 NR5A1Q13285 461 aa13.44□□□□□ -0.26
SPG7-222ENST00000569820 CDC42EP5Q6NZY7 148 aa13.44□□□□□ -0.26
SPG7-222ENST00000569820 OXER1Q8TDS5 423 aa13.44□□□□□ -0.26
SPG7-222ENST00000569820 PHF20Q9BVI0 1012 aa13.44□□□□□ -0.26
SPG7-222ENST00000569820 HPSEQ9Y251 543 aa13.44□□□□□ -0.26
SPG7-222ENST00000569820 PLIN4Q96Q06 1357 aa13.43□□□□□ -0.26
SPG7-222ENST00000569820 SOWAHDA6NJG2 315 aa13.43□□□□□ -0.26
SPG7-222ENST00000569820 KIF5BP33176 963 aa13.43□□□□□ -0.26
SPG7-222ENST00000569820 CRKP46108 304 aa13.43□□□□□ -0.26
SPG7-222ENST00000569820 TOB1P50616 345 aaPredicted RBP13.43□□□□□ -0.26
SPG7-222ENST00000569820 GRM4Q14833 912 aa13.43□□□□□ -0.26
SPG7-222ENST00000569820 CC2D2BQ6DHV5 1058 aa13.43□□□□□ -0.26
SPG7-222ENST00000569820 MICALL1Q8N3F8 863 aa13.43□□□□□ -0.26
SPG7-222ENST00000569820 NEDD1Q8NHV4 660 aa13.43□□□□□ -0.26
SPG7-222ENST00000569820 AFAP1L1Q8TED9 768 aa13.43□□□□□ -0.26
SPG7-222ENST00000569820 FAM212AQ96EL1 285 aa13.43□□□□□ -0.26
SPG7-222ENST00000569820 USP40Q9NVE5 1235 aa13.43□□□□□ -0.26
SPG7-222ENST00000569820 CTAGE15A4D2H0 777 aa13.42□□□□□ -0.26
SPG7-222ENST00000569820 CTAGE9A4FU28 777 aa13.42□□□□□ -0.26
SPG7-222ENST00000569820 KLHL33A6NCF5 533 aa13.42□□□□□ -0.26
SPG7-222ENST00000569820 LRRIQ3A6PVS8 624 aaPredicted RBP13.42□□□□□ -0.26
SPG7-222ENST00000569820 RNF40O75150 1001 aa13.42□□□□□ -0.26
SPG7-222ENST00000569820 CTAGE8P0CG41 777 aa13.42□□□□□ -0.26
SPG7-222ENST00000569820 ZNF569Q5MCW4 686 aa13.42□□□□□ -0.26
SPG7-222ENST00000569820 CTAGE6Q86UF2 777 aa13.42□□□□□ -0.26
SPG7-222ENST00000569820 KIAA0825Q8IV33 1275 aa13.42□□□□□ -0.26
SPG7-222ENST00000569820 CTAGE4Q8IX94 777 aa13.42□□□□□ -0.26
SPG7-222ENST00000569820 ZDHHC15Q96MV8 337 aa13.42□□□□□ -0.26
SPG7-222ENST00000569820 TMEM47Q9BQJ4 181 aa13.42□□□□□ -0.26
SPG7-222ENST00000569820 ADGRG1Q9Y653 693 aa13.42□□□□□ -0.26
SPG7-222ENST00000569820 TTC36A6NLP5 189 aa13.42□□□□□ -0.26
SPG7-222ENST00000569820 PPP6R2O75170 966 aa13.42□□□□□ -0.26
SPG7-222ENST00000569820 XBP1P17861 261 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms