RNA–Protein interactions for RNA: ENST00000569706.5

RHOT2-223, Transcript of ras homolog family member T2, human

TSL 3

Gene RHOT2, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RHOT2-223	ENST00000569706	SPC25	Q9HBM1	224 aa		28.02	■■■□□ 2.08
RHOT2-223	ENST00000569706	TMEM39A	Q9NV64	488 aa		28.02	■■■□□ 2.08
RHOT2-223	ENST00000569706	MROH7	Q68CQ1	1323 aa		28.01	■■■□□ 2.07
RHOT2-223	ENST00000569706	DCDC2C	A8MYV0	355 aa		28.01	■■■□□ 2.07
RHOT2-223	ENST00000569706	TOP1	P11387	765 aa	Known RBP	28.01	■■■□□ 2.07
RHOT2-223	ENST00000569706	PC	P11498	1178 aa	Known RBP	28.01	■■■□□ 2.07
RHOT2-223	ENST00000569706	ALAS1	P13196	640 aa		28.01	■■■□□ 2.07
RHOT2-223	ENST00000569706	RAG1	P15918	1043 aa		28.01	■■■□□ 2.07
RHOT2-223	ENST00000569706	NMI	Q13287	307 aa	Predicted RBP	28.01	■■■□□ 2.07
RHOT2-223	ENST00000569706	TMEM47	Q9BQJ4	181 aa		28.01	■■■□□ 2.07
RHOT2-223	ENST00000569706	OSBPL3	Q9H4L5	887 aa		28.01	■■■□□ 2.07
RHOT2-223	ENST00000569706	CCDC171	Q6TFL3	1326 aa		28	■■■□□ 2.07
RHOT2-223	ENST00000569706	LNPK	Q9C0E8	428 aa		28	■■■□□ 2.07
RHOT2-223	ENST00000569706	ISY1	Q9ULR0	285 aa	Known RBP	28	■■■□□ 2.07
RHOT2-223	ENST00000569706	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	27.99	■■■□□ 2.07
RHOT2-223	ENST00000569706	ARVCF	O00192	962 aa		27.99	■■■□□ 2.07
RHOT2-223	ENST00000569706	TIMP1	P01033	207 aa		27.99	■■■□□ 2.07
RHOT2-223	ENST00000569706	SNAP25	P60880	206 aa		27.99	■■■□□ 2.07
RHOT2-223	ENST00000569706	GNAS	Q5JWF2	1037 aa		27.99	■■■□□ 2.07
RHOT2-223	ENST00000569706	ZNF697	Q5TEC3	545 aa		27.99	■■■□□ 2.07
RHOT2-223	ENST00000569706	TTBK2	Q6IQ55	1244 aa		27.99	■■■□□ 2.07
RHOT2-223	ENST00000569706	CCDC174	Q6PII3	467 aa		27.99	■■■□□ 2.07
RHOT2-223	ENST00000569706	SLC43A3	Q8NBI5	491 aa		27.99	■■■□□ 2.07
RHOT2-223	ENST00000569706		A0A0U1RQG5	324 aa	Predicted RBP	27.98	■■■□□ 2.07
RHOT2-223	ENST00000569706	SNHG28	P0DPA3	235 aa		27.98	■■■□□ 2.07
RHOT2-223	ENST00000569706	TNFAIP2	Q03169	654 aa		27.98	■■■□□ 2.07
RHOT2-223	ENST00000569706	FPGS	Q05932	587 aa		27.98	■■■□□ 2.07
RHOT2-223	ENST00000569706	TAPT1	Q6NXT6	567 aa		27.98	■■■□□ 2.07
RHOT2-223	ENST00000569706	CHMP4C	Q96CF2	233 aa		27.98	■■■□□ 2.07
RHOT2-223	ENST00000569706	TTC14	Q96N46	770 aa		27.98	■■■□□ 2.07
RHOT2-223	ENST00000569706	CCPG1	Q9ULG6	757 aa		27.98	■■■□□ 2.07
RHOT2-223	ENST00000569706	EYS	Q5T1H1	3165 aa		27.97	■■■□□ 2.07
RHOT2-223	ENST00000569706	LOC102724159	A0A0B4J2E5	919 aa		27.97	■■■□□ 2.07
RHOT2-223	ENST00000569706	PDHB	P11177	359 aa		27.97	■■■□□ 2.07
RHOT2-223	ENST00000569706	PWP2	Q15269	919 aa	Known RBP	27.97	■■■□□ 2.07
RHOT2-223	ENST00000569706	SYDE2	Q5VT97	1194 aa		27.97	■■■□□ 2.07
RHOT2-223	ENST00000569706	PLEKHM2	Q8IWE5	1019 aa		27.97	■■■□□ 2.07
RHOT2-223	ENST00000569706	FAM126B	Q8IXS8	530 aa		27.97	■■■□□ 2.07
RHOT2-223	ENST00000569706	SEMA6B	Q9H3T3	888 aa		27.97	■■■□□ 2.07
RHOT2-223	ENST00000569706		Q9Y3F1	56 aa		27.97	■■■□□ 2.07
RHOT2-223	ENST00000569706	CCDC96	Q2M329	555 aa		27.96	■■■□□ 2.07
RHOT2-223	ENST00000569706	AKNAD1	Q5T1N1	836 aa		27.96	■■■□□ 2.07
RHOT2-223	ENST00000569706	MFSD5	Q6N075	450 aa		27.96	■■■□□ 2.07
RHOT2-223	ENST00000569706	TBC1D10C	Q8IV04	446 aa		27.96	■■■□□ 2.07
RHOT2-223	ENST00000569706	LAMA4	Q16363	1823 aa		27.95	■■■□□ 2.07
RHOT2-223	ENST00000569706	TMEM265	A0A087WTH1	108 aa		27.95	■■■□□ 2.06
RHOT2-223	ENST00000569706	CD4	P01730	458 aa		27.95	■■■□□ 2.06
RHOT2-223	ENST00000569706	SMPD1	P17405	629 aa		27.95	■■■□□ 2.06
RHOT2-223	ENST00000569706	SDS	P20132	328 aa		27.95	■■■□□ 2.06
RHOT2-223	ENST00000569706	SLC16A2	P36021	539 aa		27.95	■■■□□ 2.06
RHOT2-223	ENST00000569706	NT5C2	P49902	561 aa		27.95	■■■□□ 2.06
RHOT2-223	ENST00000569706	IQSEC1	Q6DN90	963 aa		27.95	■■■□□ 2.06
RHOT2-223	ENST00000569706	CHD1L	Q86WJ1	897 aa		27.95	■■■□□ 2.06
RHOT2-223	ENST00000569706	TTYH1	Q9H313	450 aa	Predicted RBP	27.95	■■■□□ 2.06
RHOT2-223	ENST00000569706	VTA1	Q9NP79	307 aa		27.95	■■■□□ 2.06
RHOT2-223	ENST00000569706	DDX49	Q9Y6V7	483 aa	Known RBP	27.95	■■■□□ 2.06
RHOT2-223	ENST00000569706	DLL1	O00548	723 aa		27.94	■■■□□ 2.06
RHOT2-223	ENST00000569706	CABYR	O75952	493 aa		27.94	■■■□□ 2.06
RHOT2-223	ENST00000569706	NUCB1	Q02818	461 aa		27.94	■■■□□ 2.06
RHOT2-223	ENST00000569706	RRP12	Q5JTH9	1297 aa	Known RBP	27.94	■■■□□ 2.06
RHOT2-223	ENST00000569706	TLK2	Q86UE8	772 aa		27.94	■■■□□ 2.06
RHOT2-223	ENST00000569706	RNPC3	Q96LT9	517 aa	Known RBP	27.94	■■■□□ 2.06
RHOT2-223	ENST00000569706	PDGFC	Q9NRA1	345 aa		27.94	■■■□□ 2.06
RHOT2-223	ENST00000569706	TRIM6-TRIM34	B2RNG4	842 aa		27.93	■■■□□ 2.06
RHOT2-223	ENST00000569706	IGHD	P01880	384 aa		27.93	■■■□□ 2.06
RHOT2-223	ENST00000569706	HAND2	P61296	217 aa		27.93	■■■□□ 2.06
RHOT2-223	ENST00000569706	BEX3	Q00994	111 aa		27.93	■■■□□ 2.06
RHOT2-223	ENST00000569706	ZNF543	Q08ER8	600 aa		27.93	■■■□□ 2.06
RHOT2-223	ENST00000569706	CLEC4D	Q8WXI8	215 aa		27.93	■■■□□ 2.06
RHOT2-223	ENST00000569706	FAM161B	Q96MY7	647 aa		27.93	■■■□□ 2.06
RHOT2-223	ENST00000569706	PURB	Q96QR8	312 aa	Known RBP	27.93	■■■□□ 2.06
RHOT2-223	ENST00000569706	CDX2	Q99626	313 aa	Predicted RBP	27.93	■■■□□ 2.06
RHOT2-223	ENST00000569706	TOMM22	Q9NS69	142 aa		27.93	■■■□□ 2.06
RHOT2-223	ENST00000569706	PNMA2	Q9UL42	364 aa		27.93	■■■□□ 2.06
RHOT2-223	ENST00000569706	MTMR7	Q9Y216	660 aa		27.93	■■■□□ 2.06
RHOT2-223	ENST00000569706	WDR19	Q8NEZ3	1342 aa		27.92	■■■□□ 2.06
RHOT2-223	ENST00000569706	NFIB	O00712	420 aa		27.92	■■■□□ 2.06
RHOT2-223	ENST00000569706	MFAP1	P55081	439 aa	Known RBP	27.92	■■■□□ 2.06
RHOT2-223	ENST00000569706	BAAT	Q14032	418 aa	Predicted RBP	27.92	■■■□□ 2.06
RHOT2-223	ENST00000569706	FSCN1	Q16658	493 aa	Known RBP	27.92	■■■□□ 2.06
RHOT2-223	ENST00000569706	RASIP1	Q5U651	963 aa		27.92	■■■□□ 2.06
RHOT2-223	ENST00000569706	NSMF	Q6X4W1	530 aa		27.92	■■■□□ 2.06
RHOT2-223	ENST00000569706	MFSD6	Q6ZSS7	791 aa		27.92	■■■□□ 2.06
RHOT2-223	ENST00000569706	C16orf59	Q7L2K0	433 aa		27.92	■■■□□ 2.06
RHOT2-223	ENST00000569706	SEZ6L	Q9BYH1	1024 aa		27.92	■■■□□ 2.06
RHOT2-223	ENST00000569706	RNF41	Q9H4P4	317 aa	Predicted RBP	27.92	■■■□□ 2.06
RHOT2-223	ENST00000569706	GRIN2D	O15399	1336 aa		27.92	■■■□□ 2.06
RHOT2-223	ENST00000569706	RBM47	A0AV96	593 aa	Known RBP	27.91	■■■□□ 2.06
RHOT2-223	ENST00000569706	CXCL17	Q6UXB2	119 aa		27.91	■■■□□ 2.06
RHOT2-223	ENST00000569706	FBXO16	Q8IX29	292 aa	Predicted RBP	27.91	■■■□□ 2.06
RHOT2-223	ENST00000569706	RILPL2	Q969X0	211 aa		27.91	■■■□□ 2.06
RHOT2-223	ENST00000569706	ADD3	Q9UEY8	706 aa	Known RBP	27.91	■■■□□ 2.06
RHOT2-223	ENST00000569706	FRMPD2	Q68DX3	1309 aa	Predicted RBP	27.91	■■■□□ 2.06
RHOT2-223	ENST00000569706	PRUNE2	Q8WUY3	3088 aa		27.9	■■■□□ 2.06
RHOT2-223	ENST00000569706	PTGS1	P23219	599 aa		27.9	■■■□□ 2.06
RHOT2-223	ENST00000569706	ALDH5A1	P51649	535 aa	Predicted RBP	27.9	■■■□□ 2.06
RHOT2-223	ENST00000569706	TMEM63B	Q5T3F8	832 aa		27.9	■■■□□ 2.06
RHOT2-223	ENST00000569706	DGKH	Q86XP1	1220 aa		27.9	■■■□□ 2.06
RHOT2-223	ENST00000569706	ANKS1A	Q92625	1134 aa		27.9	■■■□□ 2.06
RHOT2-223	ENST00000569706	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	27.9	■■■□□ 2.06	3e-10	■■□□□ 12.2

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms