RNA–Protein interactions for RNA: ENST00000569357.4

TCF4-243, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-243ENST00000569357 DYNLL2Q96FJ2 89 aa10.98□□□□□ -0.65
TCF4-243ENST00000569357 ZBED2Q9BTP6 218 aa10.98□□□□□ -0.65
TCF4-243ENST00000569357 TEX13BQ9BXU2 312 aa10.98□□□□□ -0.65
TCF4-243ENST00000569357 NOB1Q9ULX3 412 aaKnown RBP10.98□□□□□ -0.65
TCF4-243ENST00000569357 FPGT-TNNI3KV9GXZ4 949 aa10.98□□□□□ -0.65
TCF4-243ENST00000569357 GRIN2DO15399 1336 aa10.98□□□□□ -0.65
TCF4-243ENST00000569357 FOCADQ5VW36 1801 aa10.98□□□□□ -0.65
TCF4-243ENST00000569357 CHD9Q3L8U1 2897 aa10.97□□□□□ -0.65
TCF4-243ENST00000569357 DNAJC25-GNG10A0A024R161 153 aa10.97□□□□□ -0.65
TCF4-243ENST00000569357 MAGEB6P1A0A0J9YX57 407 aa10.97□□□□□ -0.65
TCF4-243ENST00000569357 LCHNA4D1U4 455 aa10.97□□□□□ -0.65
TCF4-243ENST00000569357 CYP2D6P10635 497 aa10.97□□□□□ -0.65
TCF4-243ENST00000569357 EEF2P13639 858 aaKnown RBP10.97□□□□□ -0.65
TCF4-243ENST00000569357 PTGS1P23219 599 aa10.97□□□□□ -0.65
TCF4-243ENST00000569357 TLK2Q86UE8 772 aa10.97□□□□□ -0.65
TCF4-243ENST00000569357 CCDC144CPQ8IYA2 1237 aa10.97□□□□□ -0.65
TCF4-243ENST00000569357 REPS2Q8NFH8 660 aa10.97□□□□□ -0.65
TCF4-243ENST00000569357 MFSD14AQ96MC6 490 aa10.97□□□□□ -0.65
TCF4-243ENST00000569357 GOPCQ9HD26 462 aa10.97□□□□□ -0.65
TCF4-243ENST00000569357 TRMT13Q9NUP7 481 aaKnown RBP10.97□□□□□ -0.65
TCF4-243ENST00000569357 ASTN1O14525 1302 aa10.96□□□□□ -0.65
TCF4-243ENST00000569357 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.96□□□□□ -0.65
TCF4-243ENST00000569357 GRXCR2A6NFK2 248 aa10.96□□□□□ -0.65
TCF4-243ENST00000569357 H3BQ06 376 aaPredicted RBP10.96□□□□□ -0.65
TCF4-243ENST00000569357 IGSF3O75054 1194 aa10.96□□□□□ -0.65
TCF4-243ENST00000569357 GNAI3P08754 354 aa10.96□□□□□ -0.65
TCF4-243ENST00000569357 KCNJ6P48051 423 aa10.96□□□□□ -0.65
TCF4-243ENST00000569357 MTX1Q13505 466 aa10.96□□□□□ -0.65
TCF4-243ENST00000569357 ALDH1L2Q3SY69 923 aa10.96□□□□□ -0.65
TCF4-243ENST00000569357 FAM47CQ5HY64 1035 aa10.96□□□□□ -0.65
TCF4-243ENST00000569357 TMCO2Q7Z6W1 182 aaPredicted RBP10.96□□□□□ -0.65
TCF4-243ENST00000569357 FAM9BQ8IZU0 186 aa10.96□□□□□ -0.65
TCF4-243ENST00000569357 RETREG2Q8NC44 543 aa10.96□□□□□ -0.65
TCF4-243ENST00000569357 SDR42E1Q8WUS8 393 aa10.96□□□□□ -0.65
TCF4-243ENST00000569357 NUP88Q99567 741 aaPredicted RBP10.96□□□□□ -0.65
TCF4-243ENST00000569357 SLF1Q9BQI6 1058 aa10.96□□□□□ -0.65
TCF4-243ENST00000569357 CRNKL1Q9BZJ0 848 aaKnown RBP10.96□□□□□ -0.65
TCF4-243ENST00000569357 API5Q9BZZ5 524 aaKnown RBP10.96□□□□□ -0.65
TCF4-243ENST00000569357 ALDH8A1Q9H2A2 487 aaPredicted RBP10.96□□□□□ -0.65
TCF4-243ENST00000569357 LMCD1Q9NZU5 365 aa10.96□□□□□ -0.65
TCF4-243ENST00000569357 SWAP70Q9UH65 585 aa10.96□□□□□ -0.65
TCF4-243ENST00000569357 TNKSO95271 1327 aa10.95□□□□□ -0.66
TCF4-243ENST00000569357 PNMA6EA0A0J9YXQ4 647 aa10.95□□□□□ -0.66
TCF4-243ENST00000569357 SUPT20HL2P0C7V6 817 aa10.95□□□□□ -0.66
TCF4-243ENST00000569357 VASPP50552 380 aaPredicted RBP10.95□□□□□ -0.66
TCF4-243ENST00000569357 TMEM92Q6UXU6 159 aa10.95□□□□□ -0.66
TCF4-243ENST00000569357 CRBNQ96SW2 442 aa10.95□□□□□ -0.66
TCF4-243ENST00000569357 RIOK1Q9BRS2 568 aaKnown RBP10.95□□□□□ -0.66
TCF4-243ENST00000569357 SEZ6LQ9BYH1 1024 aa10.95□□□□□ -0.66
TCF4-243ENST00000569357 ANTXR1Q9H6X2 564 aa10.95□□□□□ -0.66
TCF4-243ENST00000569357 SUGCTQ9HAC7 445 aa10.95□□□□□ -0.66
TCF4-243ENST00000569357 RAVER2Q9HCJ3 691 aaKnown RBP10.95□□□□□ -0.66
TCF4-243ENST00000569357 HOMER2Q9NSB8 354 aa10.95□□□□□ -0.66
TCF4-243ENST00000569357 CHD7Q9P2D1 2997 aa10.95□□□□□ -0.66
TCF4-243ENST00000569357 GFRA3O60609 400 aa10.94□□□□□ -0.66
TCF4-243ENST00000569357 ZBED4O75132 1171 aa10.94□□□□□ -0.66
TCF4-243ENST00000569357 SMPD1P17405 629 aa10.94□□□□□ -0.66
TCF4-243ENST00000569357 NKX3-2P78367 333 aa10.94□□□□□ -0.66
TCF4-243ENST00000569357 FOXK2Q01167 660 aa10.94□□□□□ -0.66
TCF4-243ENST00000569357 PUS10Q3MIT2 529 aaKnown RBP10.94□□□□□ -0.66
TCF4-243ENST00000569357 EEPD1Q7L9B9 569 aa10.94□□□□□ -0.66
TCF4-243ENST00000569357 ZNF687Q8N1G0 1237 aa10.94□□□□□ -0.66
TCF4-243ENST00000569357 PPP1R13LQ8WUF5 828 aa10.94□□□□□ -0.66
TCF4-243ENST00000569357 ZNF512BQ96KM6 892 aaPredicted RBP10.94□□□□□ -0.66
TCF4-243ENST00000569357 FGD4Q96M96 766 aa10.94□□□□□ -0.66
TCF4-243ENST00000569357 CCDC8Q9H0W5 538 aaPredicted RBP10.94□□□□□ -0.66
TCF4-243ENST00000569357 GNEQ9Y223 722 aaKnown RBP10.94□□□□□ -0.66
TCF4-243ENST00000569357 REV3LO60673 3130 aa10.94□□□□□ -0.66
TCF4-243ENST00000569357 COL11A1P12107 1806 aaPredicted RBP10.93□□□□□ -0.66
TCF4-243ENST00000569357 MYL3P08590 195 aa10.93□□□□□ -0.66
TCF4-243ENST00000569357 IQCF3P0C7M6 154 aa10.93□□□□□ -0.66
TCF4-243ENST00000569357 RFC2P35250 354 aa10.93□□□□□ -0.66
TCF4-243ENST00000569357 PTPN5P54829 565 aa10.93□□□□□ -0.66
TCF4-243ENST00000569357 CNTN2Q02246 1040 aa10.93□□□□□ -0.66
TCF4-243ENST00000569357 PRSS33Q8NF86 280 aa10.93□□□□□ -0.66
TCF4-243ENST00000569357 KIFC2Q96AC6 838 aa10.93□□□□□ -0.66
TCF4-243ENST00000569357 CCDC17Q96LX7 622 aa10.93□□□□□ -0.66
TCF4-243ENST00000569357 UPF3BQ9BZI7 483 aaKnown RBP10.93□□□□□ -0.66
TCF4-243ENST00000569357 KATNBL1Q9H079 304 aa10.93□□□□□ -0.66
TCF4-243ENST00000569357 KANSL2Q9H9L4 492 aa10.93□□□□□ -0.66
TCF4-243ENST00000569357 DCP1AQ9NPI6 582 aaPredicted RBP10.93□□□□□ -0.66
TCF4-243ENST00000569357 GPR108Q9NPR9 543 aa10.93□□□□□ -0.66
TCF4-243ENST00000569357 PDGFCQ9NRA1 345 aa10.93□□□□□ -0.66
TCF4-243ENST00000569357 FAM86C1Q9NVL1 165 aa10.93□□□□□ -0.66
TCF4-243ENST00000569357 TLR7Q9NYK1 1049 aaKnown RBP10.93□□□□□ -0.66
TCF4-243ENST00000569357 DBNLQ9UJU6 430 aaKnown RBP10.93□□□□□ -0.66
TCF4-243ENST00000569357 DDX49Q9Y6V7 483 aaKnown RBP10.93□□□□□ -0.66
TCF4-243ENST00000569357 CYP2D7A0A087X1C5 515 aa10.92□□□□□ -0.66
TCF4-243ENST00000569357 SURF6O75683 361 aaKnown RBP10.92□□□□□ -0.66
TCF4-243ENST00000569357 GNAI2P04899 355 aa10.92□□□□□ -0.66
TCF4-243ENST00000569357 CDK8P49336 464 aa10.92□□□□□ -0.66
TCF4-243ENST00000569357 CHMP4BP1P59074 171 aa10.92□□□□□ -0.66
TCF4-243ENST00000569357 ZP2Q05996 745 aa10.92□□□□□ -0.66
TCF4-243ENST00000569357 TMEM63BQ5T3F8 832 aa10.92□□□□□ -0.66
TCF4-243ENST00000569357 FAM117BQ6P1L5 589 aa10.92□□□□□ -0.66
TCF4-243ENST00000569357 PRPF38AQ8NAV1 312 aaKnown RBP10.92□□□□□ -0.66
TCF4-243ENST00000569357 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.92□□□□□ -0.66
TCF4-243ENST00000569357 TGS1Q96RS0 853 aaKnown RBP10.92□□□□□ -0.66
TCF4-243ENST00000569357 GPHNQ9NQX3 736 aaPredicted RBP10.92□□□□□ -0.66
TCF4-243ENST00000569357 FBXO40Q9UH90 709 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms