RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 SNX21Q969T3 373 aa18.54■□□□□ 0.56
USB1-215ENST00000569252 CPVLQ9H3G5 476 aa18.54■□□□□ 0.56
USB1-215ENST00000569252 RIOX1Q9H6W3 641 aa18.54■□□□□ 0.56
USB1-215ENST00000569252 JMJD4Q9H9V9 463 aa18.54■□□□□ 0.56
USB1-215ENST00000569252 ADAMTS5Q9UNA0 930 aa18.54■□□□□ 0.56
USB1-215ENST00000569252 LOC285556D6RIA3 1793 aa18.53■□□□□ 0.56
USB1-215ENST00000569252 PNMA6FA0A0J9YX94 578 aa18.53■□□□□ 0.56
USB1-215ENST00000569252 TNPO2O14787 897 aaKnown RBP18.53■□□□□ 0.56
USB1-215ENST00000569252 ZBTB5O15062 677 aa18.53■□□□□ 0.56
USB1-215ENST00000569252 STAT3P40763 770 aa18.53■□□□□ 0.56
USB1-215ENST00000569252 UBXN2AP68543 259 aa18.53■□□□□ 0.56
USB1-215ENST00000569252 CDC37Q16543 378 aaPredicted RBP18.53■□□□□ 0.56
USB1-215ENST00000569252 SLAIN1Q8ND83 568 aa18.53■□□□□ 0.56
USB1-215ENST00000569252 SLC26A6Q9BXS9 759 aa18.53■□□□□ 0.56
USB1-215ENST00000569252 RANBP17Q9H2T7 1088 aaKnown RBP18.53■□□□□ 0.56
USB1-215ENST00000569252 V9GY48 417 aaPredicted RBP18.53■□□□□ 0.56
USB1-215ENST00000569252 SGPL1O95470 568 aa18.52■□□□□ 0.56
USB1-215ENST00000569252 SLC25A27O95847 323 aa18.52■□□□□ 0.56
USB1-215ENST00000569252 HSP90AA1P07900 732 aaKnown RBP18.52■□□□□ 0.56
USB1-215ENST00000569252 IFNAR1P17181 557 aa18.52■□□□□ 0.56
USB1-215ENST00000569252 COPB2P35606 906 aa18.52■□□□□ 0.56
USB1-215ENST00000569252 SNAP25P60880 206 aa18.52■□□□□ 0.56
USB1-215ENST00000569252 ERVK-9P63128 1117 aa18.52■□□□□ 0.56
USB1-215ENST00000569252 ERVK-24P63145 666 aa18.52■□□□□ 0.56
USB1-215ENST00000569252 FBXO11Q86XK2 927 aa18.52■□□□□ 0.56
USB1-215ENST00000569252 CCDC83Q8IWF9 413 aa18.52■□□□□ 0.56
USB1-215ENST00000569252 TMX3Q96JJ7 454 aa18.52■□□□□ 0.56
USB1-215ENST00000569252 PIGSQ96S52 555 aa18.52■□□□□ 0.56
USB1-215ENST00000569252 LLPHQ9BRT6 129 aaKnown RBP18.52■□□□□ 0.56
USB1-215ENST00000569252 AMNQ9BXJ7 453 aa18.52■□□□□ 0.56
USB1-215ENST00000569252 TEX13BQ9BXU2 312 aa18.52■□□□□ 0.56
USB1-215ENST00000569252 RAVER2Q9HCJ3 691 aaKnown RBP18.52■□□□□ 0.56
USB1-215ENST00000569252 FAM217BQ9NTX9 383 aaPredicted RBP18.52■□□□□ 0.56
USB1-215ENST00000569252 RBPJLQ9UBG7 517 aa18.52■□□□□ 0.56
USB1-215ENST00000569252 CCPG1Q9ULG6 757 aa18.52■□□□□ 0.56
USB1-215ENST00000569252 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.52■□□□□ 0.56
USB1-215ENST00000569252 NID2Q14112 1375 aa18.52■□□□□ 0.55
USB1-215ENST00000569252 K7ELQ4 463 aaPredicted RBP18.51■□□□□ 0.55
USB1-215ENST00000569252 PRPF3O43395 683 aaKnown RBP18.51■□□□□ 0.55
USB1-215ENST00000569252 TFRCP02786 760 aaKnown RBP18.51■□□□□ 0.55
USB1-215ENST00000569252 ICAM1P05362 532 aa18.51■□□□□ 0.55
USB1-215ENST00000569252 TMEM132BQ14DG7 1078 aa18.51■□□□□ 0.55
USB1-215ENST00000569252 FAM110CQ1W6H9 321 aa18.51■□□□□ 0.55
USB1-215ENST00000569252 WDR78Q5VTH9 848 aa18.51■□□□□ 0.55
USB1-215ENST00000569252 SNRNP48Q6IEG0 339 aaKnown RBP18.51■□□□□ 0.55
USB1-215ENST00000569252 WASF1Q92558 559 aa18.51■□□□□ 0.55
USB1-215ENST00000569252 PAWRQ96IZ0 340 aaKnown RBP18.51■□□□□ 0.55
USB1-215ENST00000569252 HTATIP2Q9BUP3 242 aa18.51■□□□□ 0.55
USB1-215ENST00000569252 RNF26Q9BY78 433 aaPredicted RBP18.51■□□□□ 0.55
USB1-215ENST00000569252 SPATC1LQ9H0A9 340 aa18.51■□□□□ 0.55
USB1-215ENST00000569252 DAXXQ9UER7 740 aaPredicted RBP18.51■□□□□ 0.55
USB1-215ENST00000569252 ATP2A1O14983 1001 aa18.5■□□□□ 0.55
USB1-215ENST00000569252 CYTH3O43739 400 aa18.5■□□□□ 0.55
USB1-215ENST00000569252 XBP1P17861 261 aa18.5■□□□□ 0.55
USB1-215ENST00000569252 ANP32AP39687 249 aaKnown RBP18.5■□□□□ 0.55
USB1-215ENST00000569252 QRICH1Q2TAL8 776 aa18.5■□□□□ 0.55
USB1-215ENST00000569252 TKFCQ3LXA3 575 aa18.5■□□□□ 0.55
USB1-215ENST00000569252 NCAPG2Q86XI2 1143 aa18.5■□□□□ 0.55
USB1-215ENST00000569252 PHKBQ93100 1093 aa18.5■□□□□ 0.55
USB1-215ENST00000569252 BTBD7Q9P203 1132 aa18.5■□□□□ 0.55
USB1-215ENST00000569252 MORF4L1Q9UBU8 362 aa18.5■□□□□ 0.55
USB1-215ENST00000569252 ZMYND8Q9ULU4 1186 aaPredicted RBP18.5■□□□□ 0.55
USB1-215ENST00000569252 KIF3AQ9Y496 699 aa18.5■□□□□ 0.55
USB1-215ENST00000569252 A0A0C4DFX4 3053 aa18.49■□□□□ 0.55
USB1-215ENST00000569252 EVI5O60447 810 aa18.49■□□□□ 0.55
USB1-215ENST00000569252 CD2BP2O95400 341 aaKnown RBP18.49■□□□□ 0.55
USB1-215ENST00000569252 DEXIO95424 95 aa18.49■□□□□ 0.55
USB1-215ENST00000569252 LARGE1O95461 756 aa18.49■□□□□ 0.55
USB1-215ENST00000569252 ALAS1P13196 640 aa18.49■□□□□ 0.55
USB1-215ENST00000569252 USH1GQ495M9 461 aa18.49■□□□□ 0.55
USB1-215ENST00000569252 FAM184AQ8NB25 1140 aa18.49■□□□□ 0.55
USB1-215ENST00000569252 AGBL1Q96MI9 1066 aa18.49■□□□□ 0.55
USB1-215ENST00000569252 MROH8Q9H579 483 aa18.49■□□□□ 0.55
USB1-215ENST00000569252 FBXO40Q9UH90 709 aa18.49■□□□□ 0.55
USB1-215ENST00000569252 MRPL11Q9Y3B7 192 aaKnown RBP18.49■□□□□ 0.55
USB1-215ENST00000569252 PCDHA1Q9Y5I3 950 aa18.49■□□□□ 0.55
USB1-215ENST00000569252 MAPK4P31152 587 aa18.48■□□□□ 0.55
USB1-215ENST00000569252 HMGN5P82970 282 aaKnown RBP18.48■□□□□ 0.55
USB1-215ENST00000569252 NTRK3Q16288 839 aa18.48■□□□□ 0.55
USB1-215ENST00000569252 Q3C1V9 767 aa18.48■□□□□ 0.55
USB1-215ENST00000569252 HEATR3Q7Z4Q2 680 aa18.48■□□□□ 0.55
USB1-215ENST00000569252 RIOX2Q8IUF8 465 aa18.48■□□□□ 0.55
USB1-215ENST00000569252 CCDC12Q8WUD4 166 aaPredicted RBP18.48■□□□□ 0.55
USB1-215ENST00000569252 MTMR8Q96EF0 704 aa18.48■□□□□ 0.55
USB1-215ENST00000569252 TRERF1Q96PN7 1200 aa18.48■□□□□ 0.55
USB1-215ENST00000569252 TXNRD2Q9NNW7 524 aa18.48■□□□□ 0.55
USB1-215ENST00000569252 ORC3Q9UBD5 711 aaPredicted RBP18.48■□□□□ 0.55
USB1-215ENST00000569252 IVNS1ABPQ9Y6Y0 642 aa18.48■□□□□ 0.55
USB1-215ENST00000569252 ABCB11O95342 1321 aa18.48■□□□□ 0.55
USB1-215ENST00000569252 hCG_1642624A0A1W2PR95 340 aa18.47■□□□□ 0.55
USB1-215ENST00000569252 hCG_1984214I3L0E3 225 aa18.47■□□□□ 0.55
USB1-215ENST00000569252 CNMDO75829 334 aa18.47■□□□□ 0.55
USB1-215ENST00000569252 SYN1P17600 705 aa18.47■□□□□ 0.55
USB1-215ENST00000569252 MCF2L2Q86YR7 1114 aa18.47■□□□□ 0.55
USB1-215ENST00000569252 C7orf61Q8IZ16 206 aa18.47■□□□□ 0.55
USB1-215ENST00000569252 ZNF713Q8N859 430 aaPredicted RBP18.47■□□□□ 0.55
USB1-215ENST00000569252 SHCBP1Q8NEM2 672 aa18.47■□□□□ 0.55
USB1-215ENST00000569252 CHST13Q8NET6 341 aa18.47■□□□□ 0.55
USB1-215ENST00000569252 REPS2Q8NFH8 660 aa18.47■□□□□ 0.55
USB1-215ENST00000569252 DDX11Q96FC9 970 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms