RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 SLCO6A1Q86UG4 719 aa6.01□□□□□ -1.45
HERPUD1-212ENST00000567944 KREMEN2Q8NCW0 462 aa6.01□□□□□ -1.45
HERPUD1-212ENST00000567944 NPLOC4Q8TAT6 608 aa6.01□□□□□ -1.45
HERPUD1-212ENST00000567944 PTCHD1Q96NR3 888 aa6.01□□□□□ -1.45
HERPUD1-212ENST00000567944 SRPK1Q96SB4 655 aaKnown RBP6.01□□□□□ -1.45
HERPUD1-212ENST00000567944 DNAJC7Q99615 494 aa6.01□□□□□ -1.45
HERPUD1-212ENST00000567944 GPRC5CQ9NQ84 441 aa6.01□□□□□ -1.45
HERPUD1-212ENST00000567944 CYP26B1Q9NR63 512 aa6.01□□□□□ -1.45
HERPUD1-212ENST00000567944 LRP2BPQ9P2M1 347 aa6.01□□□□□ -1.45
HERPUD1-212ENST00000567944 TNFRSF10DQ9UBN6 386 aa6.01□□□□□ -1.45
HERPUD1-212ENST00000567944 PFDN2Q9UHV9 154 aa6.01□□□□□ -1.45
HERPUD1-212ENST00000567944 BACE2Q9Y5Z0 518 aa6.01□□□□□ -1.45
HERPUD1-212ENST00000567944 KIR2DL1P43626 348 aaPredicted RBP6□□□□□ -1.45
HERPUD1-212ENST00000567944 KIR2DL2P43627 348 aaPredicted RBP6□□□□□ -1.45
HERPUD1-212ENST00000567944 GFRA1P56159 465 aa6□□□□□ -1.45
HERPUD1-212ENST00000567944 DUSP4Q13115 394 aa6□□□□□ -1.45
HERPUD1-212ENST00000567944 BMS1Q14692 1282 aaKnown RBP6□□□□□ -1.45
HERPUD1-212ENST00000567944 MTERF2Q49AM1 385 aa6□□□□□ -1.45
HERPUD1-212ENST00000567944 FOXB2Q5VYV0 432 aa6□□□□□ -1.45
HERPUD1-212ENST00000567944 EEF1DP3Q658K8 133 aa6□□□□□ -1.45
HERPUD1-212ENST00000567944 LILRB2Q8N423 598 aa6□□□□□ -1.45
HERPUD1-212ENST00000567944 CRACR2BQ8N4Y2 399 aaPredicted RBP6□□□□□ -1.45
HERPUD1-212ENST00000567944 ANKS4BQ8N8V4 417 aa6□□□□□ -1.45
HERPUD1-212ENST00000567944 JMYQ8N9B5 988 aa6□□□□□ -1.45
HERPUD1-212ENST00000567944 FRS2Q8WU20 508 aa6□□□□□ -1.45
HERPUD1-212ENST00000567944 OSBP2Q969R2 916 aa6□□□□□ -1.45
HERPUD1-212ENST00000567944 CCDC120Q96HB5 630 aa6□□□□□ -1.45
HERPUD1-212ENST00000567944 JMJD8Q96S16 334 aa6□□□□□ -1.45
HERPUD1-212ENST00000567944 PLCD4Q9BRC7 762 aa6□□□□□ -1.45
HERPUD1-212ENST00000567944 SPATA9Q9BWV2 254 aa6□□□□□ -1.45
HERPUD1-212ENST00000567944 ZSWIM4Q9H7M6 989 aa6□□□□□ -1.45
HERPUD1-212ENST00000567944 USP35Q9P2H5 1018 aa6□□□□□ -1.45
HERPUD1-212ENST00000567944 FITM1A5D6W6 292 aa5.99□□□□□ -1.45
HERPUD1-212ENST00000567944 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.99□□□□□ -1.45
HERPUD1-212ENST00000567944 DLX3O60479 287 aa5.99□□□□□ -1.45
HERPUD1-212ENST00000567944 PSPNO60542 156 aa5.99□□□□□ -1.45
HERPUD1-212ENST00000567944 THBDP07204 575 aa5.99□□□□□ -1.45
HERPUD1-212ENST00000567944 ENDOUP21128 410 aaKnown RBP5.99□□□□□ -1.45
HERPUD1-212ENST00000567944 HOXC12P31275 282 aa5.99□□□□□ -1.45
HERPUD1-212ENST00000567944 PRSS53Q2L4Q9 553 aa5.99□□□□□ -1.45
HERPUD1-212ENST00000567944 SLC35F1Q5T1Q4 408 aa5.99□□□□□ -1.45
HERPUD1-212ENST00000567944 MBLAC2Q68D91 279 aa5.99□□□□□ -1.45
HERPUD1-212ENST00000567944 TMEM145Q8NBT3 493 aa5.99□□□□□ -1.45
HERPUD1-212ENST00000567944 TMEFF2Q9UIK5 374 aaPredicted RBP5.99□□□□□ -1.45
HERPUD1-212ENST00000567944 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.99□□□□□ -1.45
HERPUD1-212ENST00000567944 NRDCO43847 1150 aa5.98□□□□□ -1.45
HERPUD1-212ENST00000567944 PPP1R11O60927 126 aaPredicted RBP5.98□□□□□ -1.45
HERPUD1-212ENST00000567944 FAM153BP0C7A2 387 aa5.98□□□□□ -1.45
HERPUD1-212ENST00000567944 PLS3P13797 630 aa5.98□□□□□ -1.45
HERPUD1-212ENST00000567944 AFMP43652 599 aa5.98□□□□□ -1.45
HERPUD1-212ENST00000567944 GALK1P51570 392 aa5.98□□□□□ -1.45
HERPUD1-212ENST00000567944 RTP1P59025 263 aa5.98□□□□□ -1.45
HERPUD1-212ENST00000567944 JAG1P78504 1218 aa5.98□□□□□ -1.45
HERPUD1-212ENST00000567944 CHRNEQ04844 493 aa5.98□□□□□ -1.45
HERPUD1-212ENST00000567944 SSRP1Q08945 709 aaKnown RBP5.98□□□□□ -1.45
HERPUD1-212ENST00000567944 TESK1Q15569 626 aa5.98□□□□□ -1.45
HERPUD1-212ENST00000567944 HSF5Q4G112 596 aaPredicted RBP5.98□□□□□ -1.45
HERPUD1-212ENST00000567944 CEP128Q6ZU80 1094 aa5.98□□□□□ -1.45
HERPUD1-212ENST00000567944 NLRX1Q86UT6 975 aa5.98□□□□□ -1.45
HERPUD1-212ENST00000567944 CCDC103Q8IW40 242 aa5.98□□□□□ -1.45
HERPUD1-212ENST00000567944 OXR1Q8N573 874 aa5.98□□□□□ -1.45
HERPUD1-212ENST00000567944 MYLIPQ8WY64 445 aa5.98□□□□□ -1.45
HERPUD1-212ENST00000567944 RNF32Q9H0A6 362 aa5.98□□□□□ -1.45
HERPUD1-212ENST00000567944 KANSL2Q9H9L4 492 aa5.98□□□□□ -1.45
HERPUD1-212ENST00000567944 KDM2BQ8NHM5 1336 aa5.98□□□□□ -1.45
HERPUD1-212ENST00000567944 A0A1W2PQ45 241 aaPredicted RBP5.97□□□□□ -1.45
HERPUD1-212ENST00000567944 A0A1W2PQY0 241 aa5.97□□□□□ -1.45
HERPUD1-212ENST00000567944 IQCA1LA6NCM1 817 aa5.97□□□□□ -1.45
HERPUD1-212ENST00000567944 ZNF503-AS2A6NEH8 195 aa5.97□□□□□ -1.45
HERPUD1-212ENST00000567944 AGRPO00253 132 aa5.97□□□□□ -1.45
HERPUD1-212ENST00000567944 FGFR1P11362 822 aa5.97□□□□□ -1.45
HERPUD1-212ENST00000567944 SEPHS1P49903 392 aa5.97□□□□□ -1.45
HERPUD1-212ENST00000567944 HSP90AA2PQ14568 343 aaPredicted RBP5.97□□□□□ -1.45
HERPUD1-212ENST00000567944 CYP2R1Q6VVX0 501 aa5.97□□□□□ -1.45
HERPUD1-212ENST00000567944 SPPL2CQ8IUH8 684 aa5.97□□□□□ -1.45
HERPUD1-212ENST00000567944 LRRC47Q8N1G4 583 aaKnown RBP5.97□□□□□ -1.45
HERPUD1-212ENST00000567944 ZBTB38Q8NAP3 1195 aaPredicted RBP5.97□□□□□ -1.45
HERPUD1-212ENST00000567944 ABHD4Q8TB40 342 aa5.97□□□□□ -1.45
HERPUD1-212ENST00000567944 KIRREL1Q96J84 757 aa5.97□□□□□ -1.45
HERPUD1-212ENST00000567944 AARSD1Q9BTE6 412 aaKnown RBP5.97□□□□□ -1.45
HERPUD1-212ENST00000567944 IER2Q9BTL4 223 aa5.97□□□□□ -1.45
HERPUD1-212ENST00000567944 CLEC1BQ9P126 229 aa5.97□□□□□ -1.45
HERPUD1-212ENST00000567944 SNRPB2P08579 225 aaKnown RBP5.96□□□□□ -1.46
HERPUD1-212ENST00000567944 MSL3P1P0C860 447 aa5.96□□□□□ -1.46
HERPUD1-212ENST00000567944 PABPC1P11940 636 aaKnown RBP5.96□□□□□ -1.46
HERPUD1-212ENST00000567944 ECI1P42126 302 aa5.96□□□□□ -1.46
HERPUD1-212ENST00000567944 MVKQ03426 396 aa5.96□□□□□ -1.46
HERPUD1-212ENST00000567944 NFE2L2Q16236 605 aa5.96□□□□□ -1.46
HERPUD1-212ENST00000567944 NTRK3Q16288 839 aa5.96□□□□□ -1.46
HERPUD1-212ENST00000567944 INF2Q27J81 1249 aa5.96□□□□□ -1.46
HERPUD1-212ENST00000567944 HLA-DQA1Q5Y7H0 255 aa5.96□□□□□ -1.46
HERPUD1-212ENST00000567944 CPNE8Q86YQ8 564 aa5.96□□□□□ -1.46
HERPUD1-212ENST00000567944 LILRA2Q8N149 483 aa5.96□□□□□ -1.46
HERPUD1-212ENST00000567944 NAT16Q8N8M0 369 aa5.96□□□□□ -1.46
HERPUD1-212ENST00000567944 SYTL4Q96C24 671 aaPredicted RBP5.96□□□□□ -1.46
HERPUD1-212ENST00000567944 ASIC4Q96FT7 647 aa5.96□□□□□ -1.46
HERPUD1-212ENST00000567944 EXOC2Q96KP1 924 aa5.96□□□□□ -1.46
HERPUD1-212ENST00000567944 CCDC140Q96MF4 163 aa5.96□□□□□ -1.46
HERPUD1-212ENST00000567944 MMP19Q99542 508 aa5.96□□□□□ -1.46
HERPUD1-212ENST00000567944 FBLN5Q9UBX5 448 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms