RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 RIOX2Q8IUF8 465 aa19.39■□□□□ 0.69
CLN6-208ENST00000567060 MTMR8Q96EF0 704 aa19.39■□□□□ 0.69
CLN6-208ENST00000567060 SPATC1LQ9H0A9 340 aa19.39■□□□□ 0.69
CLN6-208ENST00000567060 ZNF214Q9UL59 606 aaPredicted RBP19.39■□□□□ 0.69
CLN6-208ENST00000567060 CNMDO75829 334 aa19.38■□□□□ 0.69
CLN6-208ENST00000567060 HMGCRP04035 888 aa19.38■□□□□ 0.69
CLN6-208ENST00000567060 PDIA3P30101 505 aaKnown RBP19.38■□□□□ 0.69
CLN6-208ENST00000567060 STAT3P40763 770 aa19.38■□□□□ 0.69
CLN6-208ENST00000567060 TMTC3Q6ZXV5 915 aa19.38■□□□□ 0.69
CLN6-208ENST00000567060 Q7L0L9 218 aa19.38■□□□□ 0.69
CLN6-208ENST00000567060 RASGRP2Q7LDG7 609 aa19.38■□□□□ 0.69
CLN6-208ENST00000567060 ADGRF4Q8IZF3 695 aa19.38■□□□□ 0.69
CLN6-208ENST00000567060 RPTORQ8N122 1335 aa19.38■□□□□ 0.69
CLN6-208ENST00000567060 STAG2Q8N3U4 1231 aa19.38■□□□□ 0.69
CLN6-208ENST00000567060 ZSCAN31Q96LW9 406 aaPredicted RBP19.38■□□□□ 0.69
CLN6-208ENST00000567060 PAGR1Q9BTK6 254 aa19.38■□□□□ 0.69
CLN6-208ENST00000567060 MYL10Q9BUA6 226 aa19.38■□□□□ 0.69
CLN6-208ENST00000567060 MROH8Q9H579 483 aa19.38■□□□□ 0.69
CLN6-208ENST00000567060 TXNRD2Q9NNW7 524 aa19.38■□□□□ 0.69
CLN6-208ENST00000567060 BTBD7Q9P203 1132 aa19.38■□□□□ 0.69
CLN6-208ENST00000567060 COL11A1P12107 1806 aaPredicted RBP19.37■□□□□ 0.69
CLN6-208ENST00000567060 ICAM1P05362 532 aa19.37■□□□□ 0.69
CLN6-208ENST00000567060 SYN1P17600 705 aa19.37■□□□□ 0.69
CLN6-208ENST00000567060 SLC16A2P36021 539 aa19.37■□□□□ 0.69
CLN6-208ENST00000567060 TMEM132BQ14DG7 1078 aa19.37■□□□□ 0.69
CLN6-208ENST00000567060 LRIT3Q3SXY7 679 aa19.37■□□□□ 0.69
CLN6-208ENST00000567060 CPLX2Q6PUV4 134 aaKnown RBP19.37■□□□□ 0.69
CLN6-208ENST00000567060 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.37■□□□□ 0.69
CLN6-208ENST00000567060 CCAR1Q8IX12 1150 aaKnown RBP19.37■□□□□ 0.69
CLN6-208ENST00000567060 DEFB123Q8N688 67 aa19.37■□□□□ 0.69
CLN6-208ENST00000567060 HMX1Q9NP08 348 aaPredicted RBP19.37■□□□□ 0.69
CLN6-208ENST00000567060 FBXO40Q9UH90 709 aa19.37■□□□□ 0.69
CLN6-208ENST00000567060 LIMCH1Q9UPQ0 1083 aa19.37■□□□□ 0.69
CLN6-208ENST00000567060 VCANP13611 3396 aa19.37■□□□□ 0.69
CLN6-208ENST00000567060 ZBTB5O15062 677 aa19.36■□□□□ 0.69
CLN6-208ENST00000567060 STRNO43815 780 aa19.36■□□□□ 0.69
CLN6-208ENST00000567060 POTEEQ6S8J3 1075 aa19.36■□□□□ 0.69
CLN6-208ENST00000567060 CHST13Q8NET6 341 aa19.36■□□□□ 0.69
CLN6-208ENST00000567060 UBA5Q9GZZ9 404 aa19.36■□□□□ 0.69
CLN6-208ENST00000567060 SLKQ9H2G2 1235 aaPredicted RBP19.36■□□□□ 0.69
CLN6-208ENST00000567060 JMJD4Q9H9V9 463 aa19.36■□□□□ 0.69
CLN6-208ENST00000567060 SH2B1Q9NRF2 756 aaPredicted RBP19.36■□□□□ 0.69
CLN6-208ENST00000567060 OGDHLQ9ULD0 1010 aa19.36■□□□□ 0.69
CLN6-208ENST00000567060 NAP1L2Q9ULW6 460 aaPredicted RBP19.36■□□□□ 0.69
CLN6-208ENST00000567060 PFKFB2O60825 505 aa19.35■□□□□ 0.69
CLN6-208ENST00000567060 CDKL5O76039 1030 aa19.35■□□□□ 0.69
CLN6-208ENST00000567060 MAGEA10P43363 369 aaPredicted RBP19.35■□□□□ 0.69
CLN6-208ENST00000567060 CDC37Q16543 378 aaPredicted RBP19.35■□□□□ 0.69
CLN6-208ENST00000567060 MAP3K21Q5TCX8 1036 aa19.35■□□□□ 0.69
CLN6-208ENST00000567060 SAMD1Q6SPF0 538 aaPredicted RBP19.35■□□□□ 0.69
CLN6-208ENST00000567060 TEX2Q8IWB9 1127 aa19.35■□□□□ 0.69
CLN6-208ENST00000567060 ABRAQ8N0Z2 381 aa19.35■□□□□ 0.69
CLN6-208ENST00000567060 TRIB2Q92519 343 aa19.35■□□□□ 0.69
CLN6-208ENST00000567060 RRP36Q96EU6 259 aaKnown RBP19.35■□□□□ 0.69
CLN6-208ENST00000567060 MOV10L1Q9BXT6 1211 aaKnown RBP19.35■□□□□ 0.69
CLN6-208ENST00000567060 MTMR10Q9NXD2 777 aa19.35■□□□□ 0.69
CLN6-208ENST00000567060 SEC63Q9UGP8 760 aaKnown RBP19.35■□□□□ 0.69
CLN6-208ENST00000567060 TPCN1Q9ULQ1 816 aa19.35■□□□□ 0.69
CLN6-208ENST00000567060 ZNF536O15090 1300 aa19.34■□□□□ 0.69
CLN6-208ENST00000567060 PNMA6FA0A0J9YX94 578 aa19.34■□□□□ 0.69
CLN6-208ENST00000567060 hCG_1984214I3L0E3 225 aa19.34■□□□□ 0.69
CLN6-208ENST00000567060 PEX10O60683 326 aa19.34■□□□□ 0.69
CLN6-208ENST00000567060 IFNAR1P17181 557 aa19.34■□□□□ 0.69
CLN6-208ENST00000567060 RXRAP19793 462 aa19.34■□□□□ 0.69
CLN6-208ENST00000567060 PLS1Q14651 629 aa19.34■□□□□ 0.69
CLN6-208ENST00000567060 Q3C1V9 767 aa19.34■□□□□ 0.69
CLN6-208ENST00000567060 SNRNP48Q6IEG0 339 aaKnown RBP19.34■□□□□ 0.69
CLN6-208ENST00000567060 ZNF713Q8N859 430 aaPredicted RBP19.34■□□□□ 0.69
CLN6-208ENST00000567060 AMNQ9BXJ7 453 aa19.34■□□□□ 0.69
CLN6-208ENST00000567060 C11orf49Q9H6J7 331 aa19.34■□□□□ 0.69
CLN6-208ENST00000567060 FAM217BQ9NTX9 383 aaPredicted RBP19.34■□□□□ 0.69
CLN6-208ENST00000567060 PLXNB2O15031 1838 aa19.34■□□□□ 0.69
CLN6-208ENST00000567060 MYH6P13533 1939 aa19.33■□□□□ 0.69
CLN6-208ENST00000567060 PFASO15067 1338 aa19.33■□□□□ 0.69
CLN6-208ENST00000567060 CPLX1O14810 134 aa19.33■□□□□ 0.68
CLN6-208ENST00000567060 CYTH3O43739 400 aa19.33■□□□□ 0.68
CLN6-208ENST00000567060 CCDC144CPQ8IYA2 1237 aa19.33■□□□□ 0.68
CLN6-208ENST00000567060 CPXCR1Q8N123 301 aa19.33■□□□□ 0.68
CLN6-208ENST00000567060 SRBD1Q8N5C6 995 aaKnown RBP19.33■□□□□ 0.68
CLN6-208ENST00000567060 SAMD3Q8N6K7 520 aa19.33■□□□□ 0.68
CLN6-208ENST00000567060 SOCS4Q8WXH5 440 aa19.33■□□□□ 0.68
CLN6-208ENST00000567060 RNF26Q9BY78 433 aaPredicted RBP19.33■□□□□ 0.68
CLN6-208ENST00000567060 RAVER2Q9HCJ3 691 aaKnown RBP19.33■□□□□ 0.68
CLN6-208ENST00000567060 CCPG1Q9ULG6 757 aa19.33■□□□□ 0.68
CLN6-208ENST00000567060 STXBP5LQ9Y2K9 1186 aa19.33■□□□□ 0.68
CLN6-208ENST00000567060 IVNS1ABPQ9Y6Y0 642 aa19.33■□□□□ 0.68
CLN6-208ENST00000567060 EYSQ5T1H1 3165 aa19.33■□□□□ 0.68
CLN6-208ENST00000567060 ABCB11O95342 1321 aa19.32■□□□□ 0.68
CLN6-208ENST00000567060 PLEKHA8P1O95397 391 aa19.32■□□□□ 0.68
CLN6-208ENST00000567060 ERCC3P19447 782 aa19.32■□□□□ 0.68
CLN6-208ENST00000567060 CYP2B6P20813 491 aa19.32■□□□□ 0.68
CLN6-208ENST00000567060 CDC27P30260 824 aa19.32■□□□□ 0.68
CLN6-208ENST00000567060 FUT2Q10981 343 aa19.32■□□□□ 0.68
CLN6-208ENST00000567060 QRICH1Q2TAL8 776 aa19.32■□□□□ 0.68
CLN6-208ENST00000567060 PLEKHH3Q7Z736 793 aa19.32■□□□□ 0.68
CLN6-208ENST00000567060 FBXO11Q86XK2 927 aa19.32■□□□□ 0.68
CLN6-208ENST00000567060 TDHQ8IZJ6 230 aa19.32■□□□□ 0.68
CLN6-208ENST00000567060 FAM177A1Q8N128 213 aaPredicted RBP19.32■□□□□ 0.68
CLN6-208ENST00000567060 CWC22Q9HCG8 908 aaKnown RBP19.32■□□□□ 0.68
CLN6-208ENST00000567060 CNTNAP5Q8WYK1 1306 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms