RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 A0A1W2PQC6 194 aa18.85■□□□□ 0.61
CMTM3-213ENST00000566756 KCNJ18B7U540 433 aa18.85■□□□□ 0.61
CMTM3-213ENST00000566756 NMT2O60551 498 aa18.85■□□□□ 0.61
CMTM3-213ENST00000566756 TBC1D8O95759 1140 aa18.85■□□□□ 0.61
CMTM3-213ENST00000566756 PRPHP41219 470 aa18.85■□□□□ 0.61
CMTM3-213ENST00000566756 KCNJ12Q14500 433 aa18.85■□□□□ 0.61
CMTM3-213ENST00000566756 WWC2Q6AWC2 1192 aa18.85■□□□□ 0.61
CMTM3-213ENST00000566756 MSL3Q8N5Y2 521 aaKnown RBP18.85■□□□□ 0.61
CMTM3-213ENST00000566756 PARD6BQ9BYG5 372 aa18.85■□□□□ 0.61
CMTM3-213ENST00000566756 CCSER1Q9C0I3 900 aa18.85■□□□□ 0.61
CMTM3-213ENST00000566756 BLZF1Q9H2G9 400 aa18.85■□□□□ 0.61
CMTM3-213ENST00000566756 CUEDC2Q9H467 287 aa18.85■□□□□ 0.61
CMTM3-213ENST00000566756 DISC1Q9NRI5 854 aa18.85■□□□□ 0.61
CMTM3-213ENST00000566756 CCDC66A2RUB6 948 aa18.84■□□□□ 0.61
CMTM3-213ENST00000566756 CTAGE9A4FU28 777 aa18.84■□□□□ 0.61
CMTM3-213ENST00000566756 TUBBP07437 444 aa18.84■□□□□ 0.61
CMTM3-213ENST00000566756 STAT6P42226 847 aa18.84■□□□□ 0.61
CMTM3-213ENST00000566756 CHMP4BP1P59074 171 aa18.84■□□□□ 0.61
CMTM3-213ENST00000566756 NOC3LQ8WTT2 800 aaKnown RBP18.84■□□□□ 0.61
CMTM3-213ENST00000566756 LZTS2Q9BRK4 669 aa18.84■□□□□ 0.61
CMTM3-213ENST00000566756 DBNDD1Q9H9R9 158 aa18.84■□□□□ 0.61
CMTM3-213ENST00000566756 LZTFL1Q9NQ48 299 aa18.84■□□□□ 0.61
CMTM3-213ENST00000566756 KCNA3P22001 575 aa18.84■□□□□ 0.61
CMTM3-213ENST00000566756 EEF1GP26641 437 aaKnown RBP18.84■□□□□ 0.61
CMTM3-213ENST00000566756 EVX2Q03828 476 aa18.84■□□□□ 0.61
CMTM3-213ENST00000566756 ADSSL1Q8N142 457 aa18.84■□□□□ 0.61
CMTM3-213ENST00000566756 CPLX3Q8WVH0 158 aa18.84■□□□□ 0.61
CMTM3-213ENST00000566756 THAP9Q9H5L6 903 aa18.84■□□□□ 0.61
CMTM3-213ENST00000566756 FLT1P17948 1338 aa18.84■□□□□ 0.61
CMTM3-213ENST00000566756 ECE2O60344 883 aa18.83■□□□□ 0.61
CMTM3-213ENST00000566756 HDLBPQ00341 1268 aaKnown RBP18.83■□□□□ 0.61
CMTM3-213ENST00000566756 DTHD1Q6ZMT9 781 aa18.83■□□□□ 0.61
CMTM3-213ENST00000566756 MAPKAPK5Q8IW41 473 aa18.83■□□□□ 0.61
CMTM3-213ENST00000566756 RTKN2Q8IZC4 609 aa18.83■□□□□ 0.61
CMTM3-213ENST00000566756 MSANTD4Q8NCY6 345 aa18.83■□□□□ 0.61
CMTM3-213ENST00000566756 PNMA1Q8ND90 353 aa18.83■□□□□ 0.61
CMTM3-213ENST00000566756 ZNF287Q9HBT7 754 aa18.83■□□□□ 0.61
CMTM3-213ENST00000566756 CCDC194A0A1B0GVG4 234 aa18.82■□□□□ 0.6
CMTM3-213ENST00000566756 CCT6AP40227 531 aaKnown RBP18.82■□□□□ 0.6
CMTM3-213ENST00000566756 PRCPP42785 496 aa18.82■□□□□ 0.6
CMTM3-213ENST00000566756 WHAMMP3Q1A5X7 153 aa18.82■□□□□ 0.6
CMTM3-213ENST00000566756 ZNF569Q5MCW4 686 aa18.82■□□□□ 0.6
CMTM3-213ENST00000566756 DACT2Q5SW24 774 aa18.82■□□□□ 0.6
CMTM3-213ENST00000566756 STAMQ92783 540 aa18.82■□□□□ 0.6
CMTM3-213ENST00000566756 PSMD1Q99460 953 aa18.82■□□□□ 0.6
CMTM3-213ENST00000566756 ZNF219Q9P2Y4 722 aaPredicted RBP18.82■□□□□ 0.6
CMTM3-213ENST00000566756 RAB21Q9UL25 225 aa18.82■□□□□ 0.6
CMTM3-213ENST00000566756 USP17L3A6NCW0 530 aa18.82■□□□□ 0.6
CMTM3-213ENST00000566756 USP17L4A6NCW7 530 aa18.82■□□□□ 0.6
CMTM3-213ENST00000566756 C21orf2O43822 256 aa18.82■□□□□ 0.6
CMTM3-213ENST00000566756 RHOBTB3O94955 611 aa18.82■□□□□ 0.6
CMTM3-213ENST00000566756 PPP1R2P41236 205 aa18.82■□□□□ 0.6
CMTM3-213ENST00000566756 ERVK-24P63145 666 aa18.82■□□□□ 0.6
CMTM3-213ENST00000566756 TFAP4Q01664 338 aa18.82■□□□□ 0.6
CMTM3-213ENST00000566756 STIM1Q13586 685 aa18.82■□□□□ 0.6
CMTM3-213ENST00000566756 ZNF662Q6ZS27 426 aa18.82■□□□□ 0.6
CMTM3-213ENST00000566756 USP17L1Q7RTZ2 530 aa18.82■□□□□ 0.6
CMTM3-213ENST00000566756 TEKT1Q969V4 418 aa18.82■□□□□ 0.6
CMTM3-213ENST00000566756 AK8Q96MA6 479 aa18.82■□□□□ 0.6
CMTM3-213ENST00000566756 NUP88Q99567 741 aaPredicted RBP18.82■□□□□ 0.6
CMTM3-213ENST00000566756 NAPGQ99747 312 aaPredicted RBP18.82■□□□□ 0.6
CMTM3-213ENST00000566756 IRX2Q9BZI1 471 aaPredicted RBP18.82■□□□□ 0.6
CMTM3-213ENST00000566756 VPS33BQ9H267 617 aa18.82■□□□□ 0.6
CMTM3-213ENST00000566756 IL17RBQ9NRM6 502 aa18.82■□□□□ 0.6
CMTM3-213ENST00000566756 KBTBD4Q9NVX7 518 aa18.82■□□□□ 0.6
CMTM3-213ENST00000566756 LGALS16A8MUM7 142 aa18.81■□□□□ 0.6
CMTM3-213ENST00000566756 DPEP1P16444 411 aa18.81■□□□□ 0.6
CMTM3-213ENST00000566756 CYP2C19P33261 490 aa18.81■□□□□ 0.6
CMTM3-213ENST00000566756 TGFB2P61812 414 aa18.81■□□□□ 0.6
CMTM3-213ENST00000566756 FUT8Q9BYC5 575 aa18.81■□□□□ 0.6
CMTM3-213ENST00000566756 VPS16Q9H269 839 aa18.81■□□□□ 0.6
CMTM3-213ENST00000566756 ST7Q9NRC1 585 aa18.81■□□□□ 0.6
CMTM3-213ENST00000566756 BARHL2Q9NY43 387 aa18.81■□□□□ 0.6
CMTM3-213ENST00000566756 MAD2L2Q9UI95 211 aa18.81■□□□□ 0.6
CMTM3-213ENST00000566756 SEC31AO94979 1220 aaKnown RBP18.81■□□□□ 0.6
CMTM3-213ENST00000566756 PARP1P09874 1014 aaKnown RBP18.81■□□□□ 0.6
CMTM3-213ENST00000566756 VEGFAP15692 232 aaPredicted RBP18.81■□□□□ 0.6
CMTM3-213ENST00000566756 KRT9P35527 623 aa18.81■□□□□ 0.6
CMTM3-213ENST00000566756 ARHGAP25P42331 645 aa18.81■□□□□ 0.6
CMTM3-213ENST00000566756 ORC2Q13416 577 aaPredicted RBP18.81■□□□□ 0.6
CMTM3-213ENST00000566756 AOC3Q16853 763 aa18.81■□□□□ 0.6
CMTM3-213ENST00000566756 KIF4BQ2VIQ3 1234 aa18.81■□□□□ 0.6
CMTM3-213ENST00000566756 NAALADL2Q58DX5 795 aa18.81■□□□□ 0.6
CMTM3-213ENST00000566756 C16orf86Q6ZW13 317 aa18.81■□□□□ 0.6
CMTM3-213ENST00000566756 MXD3Q9BW11 206 aa18.81■□□□□ 0.6
CMTM3-213ENST00000566756 TAB2Q9NYJ8 693 aa18.81■□□□□ 0.6
CMTM3-213ENST00000566756 PCDHA6Q9UN73 950 aa18.81■□□□□ 0.6
CMTM3-213ENST00000566756 PCDHA8Q9Y5H6 950 aa18.81■□□□□ 0.6
CMTM3-213ENST00000566756 ADAMTSL1Q8N6G6 1762 aa18.8■□□□□ 0.6
CMTM3-213ENST00000566756 SASH3O75995 380 aa18.8■□□□□ 0.6
CMTM3-213ENST00000566756 IRF2BP1Q8IU81 584 aa18.8■□□□□ 0.6
CMTM3-213ENST00000566756 MB21D1Q8N884 522 aa18.8■□□□□ 0.6
CMTM3-213ENST00000566756 GIMAP8Q8ND71 665 aaPredicted RBP18.8■□□□□ 0.6
CMTM3-213ENST00000566756 DHTKD1Q96HY7 919 aaPredicted RBP18.8■□□□□ 0.6
CMTM3-213ENST00000566756 ZDHHC15Q96MV8 337 aa18.8■□□□□ 0.6
CMTM3-213ENST00000566756 DNAJC7Q99615 494 aa18.8■□□□□ 0.6
CMTM3-213ENST00000566756 MTFR1LQ9H019 292 aa18.8■□□□□ 0.6
CMTM3-213ENST00000566756 KCNQ5Q9NR82 932 aa18.8■□□□□ 0.6
CMTM3-213ENST00000566756 BRCA1P38398 1863 aaKnown RBP18.8■□□□□ 0.6
CMTM3-213ENST00000566756 F8W031 263 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms