RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 SMARCA1P28370 1054 aa21.06■□□□□ 0.96
MSLN-207ENST00000566549 UBE2SQ16763 222 aa21.06■□□□□ 0.96
MSLN-207ENST00000566549 TCP11X2Q5H9J9 407 aa21.06■□□□□ 0.96
MSLN-207ENST00000566549 FCHSD1Q86WN1 690 aa21.06■□□□□ 0.96
MSLN-207ENST00000566549 TDP2O95551 362 aa21.06■□□□□ 0.96
MSLN-207ENST00000566549 TNNI2P48788 182 aa21.06■□□□□ 0.96
MSLN-207ENST00000566549 ELF2Q15723 593 aa21.06■□□□□ 0.96
MSLN-207ENST00000566549 ADSSL1Q8N142 457 aa21.06■□□□□ 0.96
MSLN-207ENST00000566549 JMJD4Q9H9V9 463 aa21.06■□□□□ 0.96
MSLN-207ENST00000566549 SWAP70Q9UH65 585 aa21.06■□□□□ 0.96
MSLN-207ENST00000566549 SLC37A4O43826 429 aa21.05■□□□□ 0.96
MSLN-207ENST00000566549 GYPCP04921 128 aa21.05■□□□□ 0.96
MSLN-207ENST00000566549 SNHG28P0DPA3 235 aa21.05■□□□□ 0.96
MSLN-207ENST00000566549 FXR1P51114 621 aaKnown RBP eCLIP21.05■□□□□ 0.96
MSLN-207ENST00000566549 COPB1P53618 953 aaKnown RBP21.05■□□□□ 0.96
MSLN-207ENST00000566549 ZNF543Q08ER8 600 aa21.05■□□□□ 0.96
MSLN-207ENST00000566549 UBE2Q2Q8WVN8 375 aa21.05■□□□□ 0.96
MSLN-207ENST00000566549 CCDC94Q9BW85 323 aaPredicted RBP21.05■□□□□ 0.96
MSLN-207ENST00000566549 LIMA1Q9UHB6 759 aaKnown RBP21.05■□□□□ 0.96
MSLN-207ENST00000566549 PES1O00541 588 aaKnown RBP21.05■□□□□ 0.96
MSLN-207ENST00000566549 PPP1R11O60927 126 aaPredicted RBP21.05■□□□□ 0.96
MSLN-207ENST00000566549 SYCP1Q15431 976 aa21.05■□□□□ 0.96
MSLN-207ENST00000566549 ERO1AQ96HE7 468 aa21.05■□□□□ 0.96
MSLN-207ENST00000566549 MFAP3LO75121 409 aa21.04■□□□□ 0.96
MSLN-207ENST00000566549 HHIPL2Q6UWX4 724 aa21.04■□□□□ 0.96
MSLN-207ENST00000566549 C2CD5Q86YS7 1000 aa21.04■□□□□ 0.96
MSLN-207ENST00000566549 AK8Q96MA6 479 aa21.04■□□□□ 0.96
MSLN-207ENST00000566549 DNAJC18Q9H819 358 aa21.04■□□□□ 0.96
MSLN-207ENST00000566549 L2HGDHQ9H9P8 463 aa21.04■□□□□ 0.96
MSLN-207ENST00000566549 ESYT2A0FGR8 921 aa21.04■□□□□ 0.96
MSLN-207ENST00000566549 USP17L10C9JJH3 530 aa21.04■□□□□ 0.96
MSLN-207ENST00000566549 URI1O94763 535 aaPredicted RBP21.04■□□□□ 0.96
MSLN-207ENST00000566549 ASIC1P78348 528 aa21.04■□□□□ 0.96
MSLN-207ENST00000566549 CALCRLQ16602 461 aa21.04■□□□□ 0.96
MSLN-207ENST00000566549 RAD9BQ6WBX8 426 aa21.04■□□□□ 0.96
MSLN-207ENST00000566549 ZSCAN29Q8IWY8 852 aaPredicted RBP21.04■□□□□ 0.96
MSLN-207ENST00000566549 PANX2Q96RD6 677 aa21.04■□□□□ 0.96
MSLN-207ENST00000566549 MMTAG2Q9BU76 263 aaKnown RBP21.04■□□□□ 0.96
MSLN-207ENST00000566549 PHLPP2Q6ZVD8 1323 aa21.03■□□□□ 0.96
MSLN-207ENST00000566549 GNG11P61952 73 aa21.03■□□□□ 0.96
MSLN-207ENST00000566549 ANKRD20A12PQ8NF67 263 aa21.03■□□□□ 0.96
MSLN-207ENST00000566549 HPS3Q969F9 1004 aa21.03■□□□□ 0.96
MSLN-207ENST00000566549 GJA10Q969M2 543 aa21.03■□□□□ 0.96
MSLN-207ENST00000566549 TRIM47Q96LD4 638 aa21.03■□□□□ 0.96
MSLN-207ENST00000566549 UIMC1Q96RL1 719 aa21.03■□□□□ 0.96
MSLN-207ENST00000566549 WDR24Q96S15 920 aa21.03■□□□□ 0.96
MSLN-207ENST00000566549 TRIM9Q9C026 710 aa21.03■□□□□ 0.96
MSLN-207ENST00000566549 A0A0U1RQJ8 604 aa21.03■□□□□ 0.96
MSLN-207ENST00000566549 SPDYE4A6NLX3 237 aa21.03■□□□□ 0.96
MSLN-207ENST00000566549 SPAG1Q07617 926 aa21.03■□□□□ 0.96
MSLN-207ENST00000566549 ATRIPQ8WXE1 791 aa21.03■□□□□ 0.96
MSLN-207ENST00000566549 MRPL44Q9H9J2 332 aaKnown RBP21.03■□□□□ 0.96
MSLN-207ENST00000566549 DDTLA6NHG4 134 aaPredicted RBP21.02■□□□□ 0.96
MSLN-207ENST00000566549 POTEMA6NI47 508 aa21.02■□□□□ 0.96
MSLN-207ENST00000566549 RNF225M0QZC1 329 aaPredicted RBP21.02■□□□□ 0.96
MSLN-207ENST00000566549 PLSCR1O15162 318 aa21.02■□□□□ 0.96
MSLN-207ENST00000566549 RHOBTB3O94955 611 aa21.02■□□□□ 0.96
MSLN-207ENST00000566549 FCER1AP12319 257 aa21.02■□□□□ 0.96
MSLN-207ENST00000566549 UBXN1Q04323 297 aa21.02■□□□□ 0.96
MSLN-207ENST00000566549 PDE4DQ08499 809 aa21.02■□□□□ 0.96
MSLN-207ENST00000566549 KCNB1Q14721 858 aa21.02■□□□□ 0.96
MSLN-207ENST00000566549 CCDC93Q567U6 631 aa21.02■□□□□ 0.96
MSLN-207ENST00000566549 IRF2BP1Q8IU81 584 aa21.02■□□□□ 0.96
MSLN-207ENST00000566549 GIMAP8Q8ND71 665 aaPredicted RBP21.02■□□□□ 0.96
MSLN-207ENST00000566549 SRRTQ9BXP5 876 aaKnown RBP21.02■□□□□ 0.96
MSLN-207ENST00000566549 LRWD1Q9UFC0 647 aa21.02■□□□□ 0.96
MSLN-207ENST00000566549 PNMA6FA0A0J9YX94 578 aa21.02■□□□□ 0.95
MSLN-207ENST00000566549 EDIL3O43854 480 aa21.02■□□□□ 0.95
MSLN-207ENST00000566549 CHRNA5P30532 468 aa21.02■□□□□ 0.95
MSLN-207ENST00000566549 STIM1Q13586 685 aa21.02■□□□□ 0.95
MSLN-207ENST00000566549 PODNQ7Z5L7 613 aa21.02■□□□□ 0.95
MSLN-207ENST00000566549 NUP88Q99567 741 aaPredicted RBP21.02■□□□□ 0.95
MSLN-207ENST00000566549 LZTFL1Q9NQ48 299 aa21.02■□□□□ 0.95
MSLN-207ENST00000566549 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.02■□□□□ 0.95
MSLN-207ENST00000566549 LRRC10BA6NIK2 292 aa21.01■□□□□ 0.95
MSLN-207ENST00000566549 hCG_1984214I3L0E3 225 aa21.01■□□□□ 0.95
MSLN-207ENST00000566549 ECE2O60344 883 aa21.01■□□□□ 0.95
MSLN-207ENST00000566549 TUBB4AP04350 444 aa21.01■□□□□ 0.95
MSLN-207ENST00000566549 ERCC6LQ2NKX8 1250 aa21.01■□□□□ 0.95
MSLN-207ENST00000566549 ZNF713Q8N859 430 aaPredicted RBP21.01■□□□□ 0.95
MSLN-207ENST00000566549 IRX2Q9BZI1 471 aaPredicted RBP21.01■□□□□ 0.95
MSLN-207ENST00000566549 EXOC1Q9NV70 894 aa21.01■□□□□ 0.95
MSLN-207ENST00000566549 COL11A2P13942 1736 aaPredicted RBP21.01■□□□□ 0.95
MSLN-207ENST00000566549 H7C1D1 291 aa21■□□□□ 0.95
MSLN-207ENST00000566549 PSMA7O14818 248 aa21■□□□□ 0.95
MSLN-207ENST00000566549 STK4Q13043 487 aa21■□□□□ 0.95
MSLN-207ENST00000566549 CALML4Q96GE6 196 aa21■□□□□ 0.95
MSLN-207ENST00000566549 MTMR9Q96QG7 549 aa21■□□□□ 0.95
MSLN-207ENST00000566549 FOCADQ5VW36 1801 aa21■□□□□ 0.95
MSLN-207ENST00000566549 TPM1P09493 284 aa21■□□□□ 0.95
MSLN-207ENST00000566549 CBX1P83916 185 aa21■□□□□ 0.95
MSLN-207ENST00000566549 CNGA4Q8IV77 575 aa21■□□□□ 0.95
MSLN-207ENST00000566549 ZDHHC15Q96MV8 337 aa21■□□□□ 0.95
MSLN-207ENST00000566549 CUEDC2Q9H467 287 aa21■□□□□ 0.95
MSLN-207ENST00000566549 MYL1P05976 194 aa20.99■□□□□ 0.95
MSLN-207ENST00000566549 CCDC175P0C221 793 aa20.99■□□□□ 0.95
MSLN-207ENST00000566549 RIC8AQ9NPQ8 531 aa20.99■□□□□ 0.95
MSLN-207ENST00000566549 CGNQ9P2M7 1197 aaKnown RBP20.99■□□□□ 0.95
MSLN-207ENST00000566549 FAM198AQ9UFP1 575 aa20.99■□□□□ 0.95
MSLN-207ENST00000566549 ITIH6Q6UXX5 1313 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms