RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 CAVIN4Q5BKX8 364 aa24.15■■□□□ 1.46
SPSB3-208ENST00000566339 ERGIC2Q96RQ1 377 aa24.15■■□□□ 1.46
SPSB3-208ENST00000566339 FAM204AQ9H8W3 233 aa24.15■■□□□ 1.46
SPSB3-208ENST00000566339 SUGCTQ9HAC7 445 aa24.15■■□□□ 1.46
SPSB3-208ENST00000566339 ABCB11O95342 1321 aa24.14■■□□□ 1.46
SPSB3-208ENST00000566339 CCNE1P24864 410 aa24.14■■□□□ 1.46
SPSB3-208ENST00000566339 ORC2Q13416 577 aaPredicted RBP24.14■■□□□ 1.46
SPSB3-208ENST00000566339 ZSCAN29Q8IWY8 852 aaPredicted RBP24.14■■□□□ 1.46
SPSB3-208ENST00000566339 STAMQ92783 540 aa24.14■■□□□ 1.46
SPSB3-208ENST00000566339 TRIM47Q96LD4 638 aa24.14■■□□□ 1.46
SPSB3-208ENST00000566339 CRNKL1Q9BZJ0 848 aaKnown RBP24.14■■□□□ 1.46
SPSB3-208ENST00000566339 SHOX2O60902 331 aaPredicted RBP24.14■■□□□ 1.45
SPSB3-208ENST00000566339 ATP1A1P05023 1023 aaKnown RBP24.14■■□□□ 1.45
SPSB3-208ENST00000566339 VAV2P52735 878 aa24.14■■□□□ 1.45
SPSB3-208ENST00000566339 LRRC31Q6UY01 552 aa24.14■■□□□ 1.45
SPSB3-208ENST00000566339 CCNI2Q6ZMN8 369 aaPredicted RBP24.14■■□□□ 1.45
SPSB3-208ENST00000566339 ARHGAP27Q6ZUM4 889 aa24.14■■□□□ 1.45
SPSB3-208ENST00000566339 DGKHQ86XP1 1220 aa24.14■■□□□ 1.45
SPSB3-208ENST00000566339 TRIM58Q8NG06 486 aa24.14■■□□□ 1.45
SPSB3-208ENST00000566339 MMS19Q96T76 1030 aa24.14■■□□□ 1.45
SPSB3-208ENST00000566339 ABCF2Q9UG63 623 aa24.14■■□□□ 1.45
SPSB3-208ENST00000566339 ZC3H4Q9UPT8 1303 aaKnown RBP24.13■■□□□ 1.45
SPSB3-208ENST00000566339 M0R2N6 131 aa24.13■■□□□ 1.45
SPSB3-208ENST00000566339 RGL2O15211 777 aa24.13■■□□□ 1.45
SPSB3-208ENST00000566339 CRKLP46109 303 aaKnown RBP24.13■■□□□ 1.45
SPSB3-208ENST00000566339 NAALADL2Q58DX5 795 aa24.13■■□□□ 1.45
SPSB3-208ENST00000566339 GBP6Q6ZN66 633 aa24.13■■□□□ 1.45
SPSB3-208ENST00000566339 CCDC155Q8N6L0 562 aa24.13■■□□□ 1.45
SPSB3-208ENST00000566339 CRACR2AQ9BSW2 395 aa24.13■■□□□ 1.45
SPSB3-208ENST00000566339 MAST2Q6P0Q8 1798 aa24.13■■□□□ 1.45
SPSB3-208ENST00000566339 USO1O60763 962 aaKnown RBP24.12■■□□□ 1.45
SPSB3-208ENST00000566339 TUBGCP2Q9BSJ2 902 aa24.12■■□□□ 1.45
SPSB3-208ENST00000566339 JRKLQ9Y4A0 524 aa24.12■■□□□ 1.45
SPSB3-208ENST00000566339 SBF2Q86WG5 1849 aa24.12■■□□□ 1.45
SPSB3-208ENST00000566339 SNAP23O00161 211 aa24.11■■□□□ 1.45
SPSB3-208ENST00000566339 UBA7P41226 1012 aa24.11■■□□□ 1.45
SPSB3-208ENST00000566339 KIF5AQ12840 1032 aa24.11■■□□□ 1.45
SPSB3-208ENST00000566339 FOXR2Q6PJQ5 311 aa24.11■■□□□ 1.45
SPSB3-208ENST00000566339 P2RX5Q93086 422 aa24.11■■□□□ 1.45
SPSB3-208ENST00000566339 TRIM34Q9BYJ4 488 aa24.11■■□□□ 1.45
SPSB3-208ENST00000566339 FAM184BQ9ULE4 1060 aa24.11■■□□□ 1.45
SPSB3-208ENST00000566339 hCG_1642624A0A1W2PR95 340 aa24.11■■□□□ 1.45
SPSB3-208ENST00000566339 CORO7P57737 925 aa24.11■■□□□ 1.45
SPSB3-208ENST00000566339 PTF1AQ7RTS3 328 aa24.11■■□□□ 1.45
SPSB3-208ENST00000566339 CAMKK2Q96RR4 588 aa24.11■■□□□ 1.45
SPSB3-208ENST00000566339 C7orf25Q9BPX7 421 aa24.11■■□□□ 1.45
SPSB3-208ENST00000566339 LZTS2Q9BRK4 669 aa24.11■■□□□ 1.45
SPSB3-208ENST00000566339 NHEJ1Q9H9Q4 299 aaPredicted RBP24.11■■□□□ 1.45
SPSB3-208ENST00000566339 BSDC1Q9NW68 430 aaPredicted RBP24.11■■□□□ 1.45
SPSB3-208ENST00000566339 COL1A1P02452 1464 aaPredicted RBP24.1■■□□□ 1.45
SPSB3-208ENST00000566339 CCDC194A0A1B0GVG4 234 aa24.1■■□□□ 1.45
SPSB3-208ENST00000566339 USP17L12C9JPN9 530 aa24.1■■□□□ 1.45
SPSB3-208ENST00000566339 USP17L21D6R901 530 aa24.1■■□□□ 1.45
SPSB3-208ENST00000566339 TNFRSF8P28908 595 aa24.1■■□□□ 1.45
SPSB3-208ENST00000566339 AMPD3Q01432 767 aa24.1■■□□□ 1.45
SPSB3-208ENST00000566339 SF3B3Q15393 1217 aaKnown RBP24.1■■□□□ 1.45
SPSB3-208ENST00000566339 FKBP15Q5T1M5 1219 aa24.1■■□□□ 1.45
SPSB3-208ENST00000566339 SMARCC1Q92922 1105 aaPredicted RBP24.1■■□□□ 1.45
SPSB3-208ENST00000566339 SECISBP2LQ93073 1101 aaKnown RBP24.1■■□□□ 1.45
SPSB3-208ENST00000566339 TACC1O75410 805 aa24.09■■□□□ 1.45
SPSB3-208ENST00000566339 LCA5LO95447 670 aa24.09■■□□□ 1.45
SPSB3-208ENST00000566339 TRIM21P19474 475 aaKnown RBP24.09■■□□□ 1.45
SPSB3-208ENST00000566339 TNNT3P45378 269 aaPredicted RBP24.09■■□□□ 1.45
SPSB3-208ENST00000566339 TBC1D8BQ0IIM8 1120 aa24.09■■□□□ 1.45
SPSB3-208ENST00000566339 SPA17Q15506 151 aa24.09■■□□□ 1.45
SPSB3-208ENST00000566339 ANKRD18AQ8IVF6 992 aa24.09■■□□□ 1.45
SPSB3-208ENST00000566339 C10orf67Q8IYJ2 551 aa24.09■■□□□ 1.45
SPSB3-208ENST00000566339 CSGALNACT2Q8N6G5 542 aa24.09■■□□□ 1.45
SPSB3-208ENST00000566339 PPM1EQ8WY54 764 aa24.09■■□□□ 1.45
SPSB3-208ENST00000566339 TRERF1Q96PN7 1200 aa24.09■■□□□ 1.45
SPSB3-208ENST00000566339 DUSP9Q99956 384 aaKnown RBP24.09■■□□□ 1.45
SPSB3-208ENST00000566339 EDEM3Q9BZQ6 932 aa24.09■■□□□ 1.45
SPSB3-208ENST00000566339 LCMT1Q9UIC8 334 aa24.09■■□□□ 1.45
SPSB3-208ENST00000566339 KIAA1551Q9HCM1 1747 aa24.09■■□□□ 1.45
SPSB3-208ENST00000566339 CPP00450 1065 aa24.08■■□□□ 1.45
SPSB3-208ENST00000566339 TCP1P17987 556 aaKnown RBP24.08■■□□□ 1.45
SPSB3-208ENST00000566339 DYNLL1P63167 89 aaKnown RBP24.08■■□□□ 1.45
SPSB3-208ENST00000566339 GRM4Q14833 912 aa24.08■■□□□ 1.45
SPSB3-208ENST00000566339 CAGE1Q8TC20 777 aa24.08■■□□□ 1.45
SPSB3-208ENST00000566339 AENQ8WTP8 325 aaKnown RBP24.08■■□□□ 1.45
SPSB3-208ENST00000566339 DCP1AQ9NPI6 582 aaPredicted RBP24.08■■□□□ 1.45
SPSB3-208ENST00000566339 TRIM10Q9UDY6 481 aa24.08■■□□□ 1.45
SPSB3-208ENST00000566339 ZNF652Q9Y2D9 606 aa24.08■■□□□ 1.45
SPSB3-208ENST00000566339 GOLGA8KD6RF30 607 aa24.08■■□□□ 1.44
SPSB3-208ENST00000566339 FGFR1OPO95684 399 aaKnown RBP24.08■■□□□ 1.44
SPSB3-208ENST00000566339 ITPK1Q13572 414 aa24.08■■□□□ 1.44
SPSB3-208ENST00000566339 DNAJC21Q5F1R6 531 aaKnown RBP24.08■■□□□ 1.44
SPSB3-208ENST00000566339 FBXO33Q7Z6M2 555 aa24.08■■□□□ 1.44
SPSB3-208ENST00000566339 EFCAB13Q8IY85 973 aa24.08■■□□□ 1.44
SPSB3-208ENST00000566339 NSUN4Q96CB9 384 aaKnown RBP24.08■■□□□ 1.44
SPSB3-208ENST00000566339 KAT14Q9H8E8 782 aa24.08■■□□□ 1.44
SPSB3-208ENST00000566339 TCP11L1Q9NUJ3 509 aa24.08■■□□□ 1.44
SPSB3-208ENST00000566339 SNX12Q9UMY4 172 aa24.08■■□□□ 1.44
SPSB3-208ENST00000566339 BAZ2AQ9UIF9 1905 aaKnown RBP24.07■■□□□ 1.44
SPSB3-208ENST00000566339 LOC102724428A0A0B4J2F2 783 aa24.07■■□□□ 1.44
SPSB3-208ENST00000566339 TRIM49BA6NDI0 452 aa24.07■■□□□ 1.44
SPSB3-208ENST00000566339 TFRCP02786 760 aaKnown RBP24.07■■□□□ 1.44
SPSB3-208ENST00000566339 PMS1P54277 932 aaKnown RBP24.07■■□□□ 1.44
SPSB3-208ENST00000566339 SIK1P57059 783 aa24.07■■□□□ 1.44
SPSB3-208ENST00000566339 FAM76AQ8TAV0 307 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms